; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022133 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022133
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA ligase/cyclic nucleotide phosphodiesterase
Genome locationChr05:21166637..21167188
RNA-Seq ExpressionHG10022133
SyntenyHG10022133
Gene Ontology termsNA
InterPro domainsIPR009097 - Cyclic phosphodiesterase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142350.1 uncharacterized protein LOC101208638 [Cucumis sativus]1.2e-9498.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEE+RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022939795.1 uncharacterized protein LOC111445566 [Cucurbita moschata]2.7e-9497.27Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEE+R GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022964210.1 uncharacterized protein LOC111464296 [Cucurbita moschata]2.7e-9497.27Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSL+SIGSLP+DNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIE GEE+RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT+EA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022993671.1 uncharacterized protein LOC111489594 [Cucurbita maxima]1.2e-9497.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEE+R GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_038890563.1 uncharacterized protein LOC120080080 [Benincasa hispida]1.2e-9497.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSD+NILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLC+AMRKEGIEIGEE+RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

TrEMBL top hitse value%identityAlignment
A0A0A0KVB2 Uncharacterized protein5.9e-9598.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEE+RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A1S3C834 uncharacterized protein LOC1034980555.9e-9598.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEE+RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A5A7T7Y4 RNA ligase/cyclic nucleotide phosphodiesterase5.9e-9598.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEE+RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A6J1FNR7 uncharacterized protein LOC1114455661.3e-9497.27Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEE+R GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A6J1JWZ6 uncharacterized protein LOC1114895945.9e-9597.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEE+R GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28140.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein8.4e-7070.11Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS +  ++ TK+E I+K+F+SKQEP+ LS SSIGS  SD+N LFL P PS+SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLL

Query:  QFQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        Q Q QLCE ++KEG EIGEE+R+ SW+P C+VA +VPK+R++E F VLRDLKL V GYA+DIGLVEFSPVRE+FSF LGN +E+
Subjt:  QFQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

AT3G28140.2 RNA ligase/cyclic nucleotide phosphodiesterase family protein3.2e-5366.01Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS +  ++ TK+E I+K+F+SKQEP+ LS SSIGS  SD+N LFL P PS+SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLL

Query:  QFQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL
        Q Q QLCE ++KEG EIGEE+R+ SW+P C+VA +VPK+R++E F V     L
Subjt:  QFQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL

AT5G40190.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein6.7e-7570.49Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MS+G+AIELYFDPALENQVLKAWNV ARRQIST+LI  ESRPHITLFS+ F + T++ES++KNF SKQEP+ +S S+IGS  SDNN+LFL P PS+SLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
         Q+QLC+ ++KE ++IGEE+R+ SW+P C VA +VPK+RMAEAF VLRDLKLPV+GY ++IGLVEFSPVRE+FSF LGNT+E+
Subjt:  FQSQLCEAMRKEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAAGGGTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGA
AATTGAATCACGCCCTCACATTACTCTTTTCTCCAGCCCTTTTCTCGAACCCACAAAAGTTGAATCCATCGTTAAAAATTTCGCTTCTAAACAGGAACCCTTGCCTCTGT
CCTTATCGTCAATTGGCAGCCTTCCCAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAGTTCCAGTCCCAATTATGCGAAGCAATGAGG
AAAGAAGGAATTGAAATCGGTGAGGAATTTCGCCTTGGTTCGTGGATACCCCATTGCGCTGTTGCTCAGGAGGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCT
AAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGTCACAAGGGTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGA
AATTGAATCACGCCCTCACATTACTCTTTTCTCCAGCCCTTTTCTCGAACCCACAAAAGTTGAATCCATCGTTAAAAATTTCGCTTCTAAACAGGAACCCTTGCCTCTGT
CCTTATCGTCAATTGGCAGCCTTCCCAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAGTTCCAGTCCCAATTATGCGAAGCAATGAGG
AAAGAAGGAATTGAAATCGGTGAGGAATTTCGCCTTGGTTCGTGGATACCCCATTGCGCTGTTGCTCAGGAGGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCT
AAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTT
GA
Protein sequenceShow/hide protein sequence
MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMR
KEGIEIGEEFRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA