; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022223 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022223
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCASP-like protein
Genome locationChr05:22076077..22079594
RNA-Seq ExpressionHG10022223
SyntenyHG10022223
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134193.1 CASP-like protein 4D1 [Momordica charantia]3.4e-5676.07Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        MA SKGSR+A+LILRILTF+LIFISLLIIATNSKT+ KGT  E KVEFKDVYSYRY+ A AVIGA LSLLQI L +Y ++TK +GTP F++FSDK L+YL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLSGASAGLGAGID+R+N K L GN+ NSFFDKGSA+AAILL+AF+C+A+VSILSSLAL+RKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

XP_022963262.1 CASP-like protein 4D1 [Cucurbita moschata]3.0e-5274.23Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        MA SKGSR+A+LILRILTFILIFISL+I ATNSKTL KGT  E K+EFK+VYSYRY++A AVIG  LSL+QI+L+IY ++TK EGTPLF LFSD  LSYL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLS +SA LGAGIDMRANLK L G + +SFFD+GS AAA+L +AFVCAA+VSILS+LALIRKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

XP_022990589.1 CASP-like protein 4D1 [Cucurbita maxima]3.3e-5173.01Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        MA SKGSR+ATLILRILT ILIFISL+I A+NSKTL KGT  E K+EFK+VYSYRY++A AVIG  LSL+QI+L+IY ++TK EGTPLF LFSD  LSYL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLS +SA LGAGID RANLK L G + +SFFD+GS AAA+LL+AF+CAA+VSILS+LALIRKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

XP_022990642.1 CASP-like protein 4D1 [Cucurbita maxima]4.3e-5173.62Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        M  SKGSR+A+LILRILTFILIFISLLI ATNSKTL KG   ETK +FKDVYSYRY+++  +IGA LSLLQI L IY+++TK   T LF++FSDK LSYL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLSGASAGLGAGID+R  LK L GN+LNSF DKG+A+AA+LL+AF+CAA+VSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

XP_038877614.1 CASP-like protein 4D1 [Benincasa hispida]1.4e-5780.62Show/hide
Query:  SKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLS
        SKGSR+A+LILRILTFILIF++LLIIATNSKT+ +GT+ ETK+EFKDV SYRY+VAVAVIG  LSLLQI   IY L+TKG+GTPLF+LFSDK LSYLLLS
Subjt:  SKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLS

Query:  GASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        GASAGLGAGIDMR N K L GN  NSFFDKGSAAAAILL+AF+CAA+VSILSSLALIRKP
Subjt:  GASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

TrEMBL top hitse value%identityAlignment
A0A6J1C1A4 CASP-like protein1.6e-5676.07Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        MA SKGSR+A+LILRILTF+LIFISLLIIATNSKT+ KGT  E KVEFKDVYSYRY+ A AVIGA LSLLQI L +Y ++TK +GTP F++FSDK L+YL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLSGASAGLGAGID+R+N K L GN+ NSFFDKGSA+AAILL+AF+C+A+VSILSSLAL+RKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

A0A6J1GRM4 CASP-like protein7.9e-5173.01Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        M  SKGSR+A+LILRILTFILIFISL+I ATNSKT  KG   ET  +FKDVYSYRY+++  VIGA LSLLQI L IY+++TK   T LF++FSDK LSYL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLSGASAGLGAGID+R  LK L GN+LNSFFDKG+A+AA+LL+AF+CAA+VSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

A0A6J1HET3 CASP-like protein1.4e-5274.23Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        MA SKGSR+A+LILRILTFILIFISL+I ATNSKTL KGT  E K+EFK+VYSYRY++A AVIG  LSL+QI+L+IY ++TK EGTPLF LFSD  LSYL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLS +SA LGAGIDMRANLK L G + +SFFD+GS AAA+L +AFVCAA+VSILS+LALIRKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

A0A6J1JJD2 CASP-like protein2.1e-5173.62Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        M  SKGSR+A+LILRILTFILIFISLLI ATNSKTL KG   ETK +FKDVYSYRY+++  +IGA LSLLQI L IY+++TK   T LF++FSDK LSYL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLSGASAGLGAGID+R  LK L GN+LNSF DKG+A+AA+LL+AF+CAA+VSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

A0A6J1JSF8 CASP-like protein1.6e-5173.01Show/hide
Query:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL
        MA SKGSR+ATLILRILT ILIFISL+I A+NSKTL KGT  E K+EFK+VYSYRY++A AVIG  LSL+QI+L+IY ++TK EGTPLF LFSD  LSYL
Subjt:  MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYL

Query:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        LLS +SA LGAGID RANLK L G + +SFFD+GS AAA+LL+AF+CAA+VSILS+LALIRKP
Subjt:  LLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

SwissProt top hitse value%identityAlignment
A1XGB4 CASP-like protein PIMP12.9e-1842.41Show/hide
Query:  TLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTK-----GEGTPLFNLFSDKFLSYLLLSGA
        +LI+RILT I + IS ++IATN++T+     G+ K++FKD Y+YRY++A  +IG   +LLQI  +I SLLT      GEG  LF+ + DKF+SY L++GA
Subjt:  TLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTK-----GEGTPLFNLFSDKFLSYLLLSGA

Query:  SAGLGAGIDMRANLKVLAG-NVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK
        +A  G    M  +LK L G +  + F +  +AAA++ L+ F  A   SI SS  L ++
Subjt:  SAGLGAGIDMRANLKVLAG-NVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK

B9NBE5 CASP-like protein 4D11.1e-2241.92Show/hide
Query:  AVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSL------LTKGEGTPLFNLFSDK
        A S  SRM  L LR+LTF  + +SL+I+ TN+ T+  G + E KV  KD YSYRY++A    G T ++LQI L +  +       T G+G  +F+ + DK
Subjt:  AVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSL------LTKGEGTPLFNLFSDK

Query:  FLSYLLLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK
         +SY+L +GA+A  GA  +++  L  L G   + FF+KG A+A++LL+ FVC A++S+ SS AL +K
Subjt:  FLSYLLLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK

B9SXY8 CASP-like protein 4D13.6e-2445.68Show/hide
Query:  SKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLT-----KGEGTPLFNLFSDKFLS
        S  SRMA LILRILTFI +  SL+I+ TN+ TL +  L E KV FKDVY+YRY++A  VIG   ++LQI   +Y + T      G+G   F+ F DK +S
Subjt:  SKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLT-----KGEGTPLFNLFSDKFLS

Query:  YLLLSGASAGLGAGIDMRANLKVLAGN-VLNSFFDKGSAAAAILLVAFVCAAMVSILSSLAL
        Y+L++GA+AG  +  D++    V +G+   ++F +KG A+A++LL+ FVC A++S+ SS AL
Subjt:  YLLLSGASAGLGAGIDMRANLKVLAGN-VLNSFFDKGSAAAAILLVAFVCAAMVSILSSLAL

D7LD60 CASP-like protein 4D12.9e-1839.26Show/hide
Query:  RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSG
        R   L+LR+LT   + I++++I+TN+ TL + +    K+ F DVY+YRY+++ AVIG   +++Q+ L I    T G   PL   FN + DK +SYLL +G
Subjt:  RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSG

Query:  ASAGLGAGIDMRANLKVL----AGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        ++AG G   D++     L    + + ++ FF KG A+A++LL AFV  A++S+ SSLAL ++P
Subjt:  ASAGLGAGIDMRANLKVL----AGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

Q8GWD5 CASP-like protein 4D11.4e-1738.65Show/hide
Query:  RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSG
        R   L+LR+LT   + I++++I+TN+ TL + +    K+ F DVY+YRY+++ AVIG   +++Q+ L I    T G+  PL   F+ + DK +SYLL +G
Subjt:  RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSG

Query:  ASAGLGAGIDMR----ANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        ++AG G   D++    A ++  + + ++ FF KG A+A++LL AFV  A++S+ SSLAL ++P
Subjt:  ASAGLGAGIDMR----ANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

Arabidopsis top hitse value%identityAlignment
AT2G39518.1 Uncharacterised protein family (UPF0497)1.5e-1734.78Show/hide
Query:  RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLT--KGEGTPLFNLFSDKFLSYLLLSGA
        ++  L+LR+LT + + I+L+I++TNS T+        K  FKDVY+YRY+++ AVIG   +++Q+   I    T  K       + + DK +SYL+ +G+
Subjt:  RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLT--KGEGTPLFNLFSDKFLSYLLLSGA

Query:  SAGLGAGIDMRANLKVLAG----NVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK
        +AG G   D++     L      + ++ FF KG A+A++LL AF+C A++S+ SS A+ ++
Subjt:  SAGLGAGIDMRANLKVLAG----NVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK

AT2G39530.1 Uncharacterised protein family (UPF0497)1.0e-1838.65Show/hide
Query:  RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSG
        R   L+LR+LT   + I++++I+TN+ TL + +    K+ F DVY+YRY+++ AVIG   +++Q+ L I    T G+  PL   F+ + DK +SYLL +G
Subjt:  RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSG

Query:  ASAGLGAGIDMR----ANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP
        ++AG G   D++    A ++  + + ++ FF KG A+A++LL AFV  A++S+ SSLAL ++P
Subjt:  ASAGLGAGIDMR----ANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCAAAGGGTTCAAGAATGGCTACTCTTATATTGAGAATTTTAACCTTTATTTTGATATTTATTTCTCTCTTAATCATCGCCACCAATTCCAAAACTCTTTT
TAAAGGGACTTTAGGTGAAACAAAAGTTGAGTTCAAAGATGTTTATTCCTATCGTTATGTGGTAGCTGTGGCGGTTATAGGAGCTACTTTGAGTCTTCTTCAAATTGTTC
TCGCCATTTACTCTCTCCTTACCAAAGGCGAGGGAACTCCACTTTTCAATTTGTTCAGCGATAAGTTCTTATCGTACCTACTATTATCGGGCGCCTCGGCGGGATTAGGC
GCAGGGATCGATATGAGAGCGAATTTGAAAGTGCTGGCTGGCAATGTTTTGAACTCATTTTTCGACAAGGGAAGTGCTGCAGCTGCTATTCTTCTTGTTGCATTTGTTTG
TGCTGCCATGGTTTCAATTCTCTCTTCCTTGGCTCTCATCAGAAAGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTCTCAAAGGGTTCAAGAATGGCTACTCTTATATTGAGAATTTTAACCTTTATTTTGATATTTATTTCTCTCTTAATCATCGCCACCAATTCCAAAACTCTTTT
TAAAGGGACTTTAGGTGAAACAAAAGTTGAGTTCAAAGATGTTTATTCCTATCGTTATGTGGTAGCTGTGGCGGTTATAGGAGCTACTTTGAGTCTTCTTCAAATTGTTC
TCGCCATTTACTCTCTCCTTACCAAAGGCGAGGGAACTCCACTTTTCAATTTGTTCAGCGATAAGTTCTTATCGTACCTACTATTATCGGGCGCCTCGGCGGGATTAGGC
GCAGGGATCGATATGAGAGCGAATTTGAAAGTGCTGGCTGGCAATGTTTTGAACTCATTTTTCGACAAGGGAAGTGCTGCAGCTGCTATTCTTCTTGTTGCATTTGTTTG
TGCTGCCATGGTTTCAATTCTCTCTTCCTTGGCTCTCATCAGAAAGCCTTAA
Protein sequenceShow/hide protein sequence
MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLG
AGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP