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HG10022225 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022225
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCASP-like protein
Genome locationChr05:22091454..22091882
RNA-Seq ExpressionHG10022225
SyntenyHG10022225
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142832.1 CASP-like protein 4D1 [Cucumis sativus]5.9e-3886.54Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        MLATIIIG++FNLLQIAF+LFNIVKNG+ TILFDFFGDKFLSYLLATG AAG G+ VDLKK+DPDDLF  FFDKAYAASTLLLFAFFC+AAVSILSSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIRS
        S RS
Subjt:  SIRS

XP_008458890.1 PREDICTED: CASP-like protein 4D1 [Cucumis melo]5.0e-3785.58Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        MLATIIIG++FNLLQIAF+LFNIVKNG+ TILFDFFGDKFLSYLLATG AAG G+ VDLKK DPDDLF +FFDKAYAAS LLLFAFFC+AAVSILSSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIRS
        S RS
Subjt:  SIRS

XP_022992767.1 CASP-like protein 4D1 [Cucurbita maxima]1.2e-3583.5Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        +LATIIIGI+FNLLQIAF+LFNIVK    TILFDFFGDKFLSYLLATGTAAG GL+VDL+ +DPDD FG+FFDKAYAAS LLLFAFFC+AAVSILSSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIR
        S R
Subjt:  SIR

XP_023549516.1 CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]2.1e-3582.52Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        +LATIIIGI+FNLLQIAF+LFNIVK    TILFDFFGDKFLSYLLATGTAAG GL+VDL+ +DPDD FG+FFDKAYAAS LLLFAFFC+AAVSI+SSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIR
        S R
Subjt:  SIR

XP_038877616.1 CASP-like protein 4D1 [Benincasa hispida]4.4e-4192.31Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        MLATIIIGI+FNLLQIAF+LFNIVKNGNSTILFDFFGDKFLSYLL TGTAAG GL+VDLKKIDPDD FGSFFDKAYAASTLLLFAFFC+AAVSILSSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIRS
        S RS
Subjt:  SIRS

TrEMBL top hitse value%identityAlignment
A0A0A0KU83 CASP-like protein2.9e-3886.54Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        MLATIIIG++FNLLQIAF+LFNIVKNG+ TILFDFFGDKFLSYLLATG AAG G+ VDLKK+DPDDLF  FFDKAYAASTLLLFAFFC+AAVSILSSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIRS
        S RS
Subjt:  SIRS

A0A1S3C9H1 CASP-like protein2.4e-3785.58Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        MLATIIIG++FNLLQIAF+LFNIVKNG+ TILFDFFGDKFLSYLLATG AAG G+ VDLKK DPDDLF +FFDKAYAAS LLLFAFFC+AAVSILSSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIRS
        S RS
Subjt:  SIRS

A0A6J1C1S4 CASP-like protein5.6e-3481.73Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        +LATIIIGII NLLQIAF+LFN VKNG+ TILFDFFGDKFLSYLLATG AAG GL VDL+  D DD +G FFDKAYAAS LLLFAFFCAAAVSILSSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIRS
        S R+
Subjt:  SIRS

A0A6J1FGY1 CASP-like protein6.6e-3580.58Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        +LATIIIG++FNLLQIAF+L NIVK    TILFDFFGDKFLSYLLATGTAAG GL+VDL+ +DPDD FG+FFDKAYAAS LLLFAFFC+AAVSI+SSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIR
        S R
Subjt:  SIR

A0A6J1JQU5 CASP-like protein6.0e-3683.5Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL
        +LATIIIGI+FNLLQIAF+LFNIVK    TILFDFFGDKFLSYLLATGTAAG GL+VDL+ +DPDD FG+FFDKAYAAS LLLFAFFC+AAVSILSSFAL
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL

Query:  SIR
        S R
Subjt:  SIR

SwissProt top hitse value%identityAlignment
A1XGB4 CASP-like protein PIMP11.6e-1443.93Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVK----NGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILS
        ++AT+IIG+ + LLQIAF++  +       G   +LFDF+GDKF+SY L TG AA  G+  DLK+++  D +  F + + AA++L L  FF A A SI S
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVK----NGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILS

Query:  SFALSIR
        S+ L  R
Subjt:  SFALSIR

B9SXY8 CASP-like protein 4D16.6e-1646.23Show/hide
Query:  MLATIIIGIIFNLLQIAFTLF-----NIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKI-DPDDLFGSFFDKAYAASTLLLFAFFCAAAVSI
        MLATI+IG+ + +LQIAFTL+     N + +G+  + FDFFGDK +SY+L TG AAG     D+K +      F +F +K YA+++LLL  F C A +S+
Subjt:  MLATIIIGIIFNLLQIAFTLF-----NIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKI-DPDDLFGSFFDKAYAASTLLLFAFFCAAAVSI

Query:  LSSFAL
         SS+AL
Subjt:  LSSFAL

C6T1Z6 CASP-like protein 4D13.3e-1548.57Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNIVK-----NGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSIL
        M++TIIIG  +NLLQ+A ++F +V      +G+   LFDFFGDK +SYLL +G+AAG G+ V+L +  P +   SF DKA A+++LLL AF   A  S  
Subjt:  MLATIIIGIIFNLLQIAFTLFNIVK-----NGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSIL

Query:  SSFAL
        +SFAL
Subjt:  SSFAL

Q56X75 CASP-like protein 4D22.1e-1443.86Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNI---VKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAA
        ML+  +IG+++ ++Q+ FT+      VKN  +  L DF+GDK +SYL+ATG+AAG G+  DLK        +D  D    FF K YA+++LLLFAF C A
Subjt:  MLATIIIGIIFNLLQIAFTLFNI---VKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAA

Query:  AVSILSSFALSIRS
         +S+ SSFA++ R+
Subjt:  AVSILSSFALSIRS

Q8GWD5 CASP-like protein 4D11.1e-1344.64Show/hide
Query:  MLATIIIGIIFNLLQIAFTL--FNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAAA
        ML+  +IG+++ ++Q+  T+  F   K    T  FDF+GDK +SYLLATG+AAG G++ DLK       + D  D    FF K YA+++LLLFAF   A 
Subjt:  MLATIIIGIIFNLLQIAFTL--FNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAAA

Query:  VSILSSFALSIR
        +S+ SS ALS R
Subjt:  VSILSSFALSIR

Arabidopsis top hitse value%identityAlignment
AT2G39518.1 Uncharacterised protein family (UPF0497)1.5e-1543.86Show/hide
Query:  MLATIIIGIIFNLLQIAFTLFNI---VKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAA
        ML+  +IG+++ ++Q+ FT+      VKN  +  L DF+GDK +SYL+ATG+AAG G+  DLK        +D  D    FF K YA+++LLLFAF C A
Subjt:  MLATIIIGIIFNLLQIAFTLFNI---VKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAA

Query:  AVSILSSFALSIRS
         +S+ SSFA++ R+
Subjt:  AVSILSSFALSIRS

AT2G39530.1 Uncharacterised protein family (UPF0497)7.5e-1544.64Show/hide
Query:  MLATIIIGIIFNLLQIAFTL--FNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAAA
        ML+  +IG+++ ++Q+  T+  F   K    T  FDF+GDK +SYLLATG+AAG G++ DLK       + D  D    FF K YA+++LLLFAF   A 
Subjt:  MLATIIIGIIFNLLQIAFTL--FNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAAA

Query:  VSILSSFALSIR
        +S+ SS ALS R
Subjt:  VSILSSFALSIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCTACTATTATCATCGGGATCATATTCAATCTTTTGCAAATCGCGTTCACACTCTTTAACATCGTTAAAAATGGCAACAGTACTATATTATTCGATTTCTTTGG
CGACAAGTTTTTGTCATACCTTCTAGCAACAGGCACAGCAGCTGGACTTGGACTGGCAGTGGATTTGAAAAAAATAGACCCAGATGATTTATTTGGTTCATTCTTTGATA
AGGCATATGCAGCATCGACTCTTCTTTTGTTTGCATTCTTTTGTGCTGCAGCTGTCTCTATTCTCTCTTCCTTTGCACTCTCCATCAGATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCTACTATTATCATCGGGATCATATTCAATCTTTTGCAAATCGCGTTCACACTCTTTAACATCGTTAAAAATGGCAACAGTACTATATTATTCGATTTCTTTGG
CGACAAGTTTTTGTCATACCTTCTAGCAACAGGCACAGCAGCTGGACTTGGACTGGCAGTGGATTTGAAAAAAATAGACCCAGATGATTTATTTGGTTCATTCTTTGATA
AGGCATATGCAGCATCGACTCTTCTTTTGTTTGCATTCTTTTGTGCTGCAGCTGTCTCTATTCTCTCTTCCTTTGCACTCTCCATCAGATCTTAA
Protein sequenceShow/hide protein sequence
MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS