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HG10022271 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022271
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLOB domain-containing protein
Genome locationChr05:22504841..22505044
RNA-Seq ExpressionHG10022271
SyntenyHG10022271
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578743.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2491.94Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        MQSPPPP   MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQ
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

KAG7016272.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-2491.94Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        MQSPPPP   MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQ
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

TYK05721.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa]6.5e-2283.87Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        MQSPPPP +  VVLSPCAACKILRR+CVDNC+LAPYFPPT+PLKFAAVH+I+GAGNVIKF Q
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

XP_022939142.1 LOB domain-containing protein 1-like [Cucurbita moschata]5.9e-2390.48Show/hide
Query:  MQSPPPPLSS-MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        MQSPPPP    MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQ
Subjt:  MQSPPPPLSS-MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

XP_023551518.1 LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]2.1e-2096.15Show/hide
Query:  MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQ
Subjt:  MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

TrEMBL top hitse value%identityAlignment
A0A2G9G2A4 LOB domain-containing protein1.3e-2078.33Show/hide
Query:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        SPPPP  S V+LSPCAACKILRRRCV+NCVLAPYFPPTEPLKF   H++FGA N+IK LQ
Subjt:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

A0A5D3C1A9 LOB domain-containing protein 1-like3.2e-2283.87Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        MQSPPPP +  VVLSPCAACKILRR+CVDNC+LAPYFPPT+PLKFAAVH+I+GAGNVIKF Q
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

A0A6J1FFZ7 LOB domain-containing protein 1-like2.9e-2390.48Show/hide
Query:  MQSPPPPLSS-MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        MQSPPPP    MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQ
Subjt:  MQSPPPPLSS-MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

A0A6P3ZFL3 LOB domain-containing protein 1-like3.9e-2075.81Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        + SPPPP S  VV+SPCAACKILRRRCVD CVLAPYFPPT+PLKF   H++FGA N+IKFLQ
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

A0A6P3ZUA1 LOB domain-containing protein 1-like3.9e-2075.81Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        + SPPPP S  VV+SPCAACKILRRRCVD CVLAPYFPPT+PLKF   H++FGA N+IKFLQ
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

SwissProt top hitse value%identityAlignment
Q8L8Q3 LOB domain-containing protein 252.3e-1472.34Show/hide
Query:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFL
        SPCAACK LRR+C  +CV APYFPP EP KFA VH+IFGA NV K L
Subjt:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFL

Q8LBW3 LOB domain-containing protein 128.0e-1568.75Show/hide
Query:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        SPCA+CK+LRRRC  +C+ APYFPP +P KFA VHK+FGA NV K LQ
Subjt:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

Q9AT61 LOB domain-containing protein 131.8e-1460.71Show/hide
Query:  PPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFL
        PP +++  ++PCAACK+LRRRC + C  +PYF P EP KFAAVHK+FGA NV K L
Subjt:  PPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFL

Q9LQR0 LOB domain-containing protein 11.5e-2175Show/hide
Query:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        SPPP LS  VVLSPCAACKILRRRC + CVLAPYFPPT+P KF   H++FGA N+IKFLQ
Subjt:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

Q9SK08 LOB domain-containing protein 112.8e-2069.7Show/hide
Query:  SPPPPLSSM------VVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        SPPPP S        VVLSPCAACKILRRRC D CVLAPYFPPT+P KF   H++FGA N+IKFLQ
Subjt:  SPPPPLSSM------VVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

Arabidopsis top hitse value%identityAlignment
AT1G07900.1 LOB domain-containing protein 11.1e-2275Show/hide
Query:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        SPPP LS  VVLSPCAACKILRRRC + CVLAPYFPPT+P KF   H++FGA N+IKFLQ
Subjt:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

AT2G28500.1 LOB domain-containing protein 112.0e-2169.7Show/hide
Query:  SPPPPLSSM------VVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        SPPPP S        VVLSPCAACKILRRRC D CVLAPYFPPT+P KF   H++FGA N+IKFLQ
Subjt:  SPPPPLSSM------VVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein5.7e-1668.75Show/hide
Query:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ
        SPCA+CK+LRRRC  +C+ APYFPP +P KFA VHK+FGA NV K LQ
Subjt:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQ

AT2G30340.1 LOB domain-containing protein 131.3e-1560.71Show/hide
Query:  PPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFL
        PP +++  ++PCAACK+LRRRC + C  +PYF P EP KFAAVHK+FGA NV K L
Subjt:  PPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFL

AT3G27650.1 LOB domain-containing protein 251.7e-1572.34Show/hide
Query:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFL
        SPCAACK LRR+C  +CV APYFPP EP KFA VH+IFGA NV K L
Subjt:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGCCGCCGCCGCCACTGTCGTCGATGGTGGTTCTCAGCCCCTGCGCCGCCTGTAAGATCCTCCGCCGGAGATGCGTCGATAATTGTGTTTTAGCGCCTTATTT
TCCTCCCACTGAGCCTCTCAAATTCGCCGCCGTGCATAAAATATTCGGAGCCGGCAACGTCATCAAGTTCCTGCAGGTAAACACCAACGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCGCCGCCGCCGCCACTGTCGTCGATGGTGGTTCTCAGCCCCTGCGCCGCCTGTAAGATCCTCCGCCGGAGATGCGTCGATAATTGTGTTTTAGCGCCTTATTT
TCCTCCCACTGAGCCTCTCAAATTCGCCGCCGTGCATAAAATATTCGGAGCCGGCAACGTCATCAAGTTCCTGCAGGTAAACACCAACGTCTAA
Protein sequenceShow/hide protein sequence
MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQVNTNV