; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022292 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022292
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNase H domain-containing protein
Genome locationChr05:22683681..22701719
RNA-Seq ExpressionHG10022292
SyntenyHG10022292
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:2000767 - positive regulation of cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0045182 - translation regulator activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465678.1 PREDICTED: uncharacterized protein LOC103503314 isoform X1 [Cucumis melo]4.4e-15292.2Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P PVFT S F+L+F  L+SFCLLLLVSQLAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

XP_008465679.1 PREDICTED: uncharacterized protein LOC103503314 isoform X2 [Cucumis melo]3.3e-13986.1Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P P                         LAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

XP_008465680.1 PREDICTED: uncharacterized protein LOC103503314 isoform X3 [Cucumis melo]4.4e-15292.2Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P PVFT S F+L+F  L+SFCLLLLVSQLAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

XP_008465681.1 PREDICTED: uncharacterized protein LOC103503314 isoform X4 [Cucumis melo]4.4e-15292.2Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P PVFT S F+L+F  L+SFCLLLLVSQLAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

XP_038889908.1 uncharacterized protein LOC120079678 isoform X2 [Benincasa hispida]5.4e-14287.5Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLL-QSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLK
        M SSLCSSIRAL PHYWRRKNFRFFLLL QSNRC CFAPRFVACLNNDDSVAIPRP P                         LAFDPAE+LYGLGVDLK
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLL-QSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLK

Query:  PRNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNL
        PRN+AS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS+ADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNL
Subjt:  PRNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNL

Query:  EIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        EIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKG+AEARKRTSEALKAFF DPENR+KRSIAMKG
Subjt:  EIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

TrEMBL top hitse value%identityAlignment
A0A1S3CPD5 uncharacterized protein LOC103503314 isoform X32.1e-15292.2Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P PVFT S F+L+F  L+SFCLLLLVSQLAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

A0A1S3CPF7 uncharacterized protein LOC103503314 isoform X21.6e-13986.1Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P P                         LAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

A0A1S3CPF8 uncharacterized protein LOC103503314 isoform X42.1e-15292.2Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P PVFT S F+L+F  L+SFCLLLLVSQLAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

A0A1S3CQW6 uncharacterized protein LOC103503314 isoform X12.1e-15292.2Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P PVFT S F+L+F  L+SFCLLLLVSQLAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

A0A5D3C105 Uncharacterized protein2.1e-13986.1Show/hide
Query:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP
        M SSLC SI AL PHYWR KNF FFLLLQSNRC CFAPRFVACL NDDSVAIP+P P                         LAFDPAE+LYGL VDLKP
Subjt:  MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKP

Query:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
        RNSAS APEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE
Subjt:  RNSASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLE

Query:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFF+DPENRRKRS AMKG
Subjt:  IKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein2.0e-4138.11Show/hide
Query:  MNCFSQISTY-TRAIFRRTTLVYAASTSIHGCSNSYWTSTF----QNLALKAPALDSLCSRFRLRCYSSQKLRKGTSPSPKLDSE--PPMESEMGDFFVV
        MNC S   +Y    + +R++ V          S+  W   F        LK  A+ S+     +  YSS   R     S  L S     ++ E   FFVV
Subjt:  MNCFSQISTY-TRAIFRRTTLVYAASTSIHGCSNSYWTSTF----QNLALKAPALDSLCSRFRLRCYSSQKLRKGTSPSPKLDSE--PPMESEMGDFFVV

Query:  RKGDVVGVYKSFTDCQAQIGSSICDLPVSVYKGEALPKDTEEYLASFGLKNALYTIKAADMRPGLFGSLEPCTFHDGDTSLKGKASCQDAIKKRSREAIV
        RKGDV+G+YK  +DCQAQ+GSS+ DLPVSVYKG +LPKDTEEYL+S GLK  LY+++A+D++  +FG+L PC F +        +  +   + +S++   
Subjt:  RKGDVVGVYKSFTDCQAQIGSSICDLPVSVYKGEALPKDTEEYLASFGLKNALYTIKAADMRPGLFGSLEPCTFHDGDTSLKGKASCQDAIKKRSREAIV

Query:  SENIGSTVLTPTSKDPSRKHVKLEVSIVSQALSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVVALLRFRFRGPDIANWNSS
         +   +++    S DP  K  K+E S        + E+CF+EFDGASKGNPG +GA AVL+  DGS++  +R   +G  IA  N++
Subjt:  SENIGSTVLTPTSKDPSRKHVKLEVSIVSQALSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVVALLRFRFRGPDIANWNSS

AT5G20220.1 zinc knuckle (CCHC-type) family protein1.6e-9160.7Show/hide
Query:  RRKNFRFFLLLQSNRCTCFAPRFVACL-------NNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKPRNSASRAPEP
        R+K  RF  LL  N    F PR ++         NND SV+  R                           Q+ +DP+E+L+  GVD KPR  +  + EP
Subjt:  RRKNFRFFLLLQSNRCTCFAPRFVACL-------NNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKPRNSASRAPEP

Query:  RSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSK
        RSWFGPNGQYI+ELPCP+CRGRGY  C+ CGIERSR DC  C GKGI+TC +CLGD VIWEESIDERPWEKARS+SP R+KEDDEVDNLEIK  +++KSK
Subjt:  RSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSK

Query:  RVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        R+YQSP PEVG KISRSLKSLNAKTG+FSKRMKIIHRDP LHAQRVAAIKKAKG+  ARK  SE++KAFF++P NR +RS++MKG
Subjt:  RVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

AT5G20220.2 zinc knuckle (CCHC-type) family protein1.6e-9160.7Show/hide
Query:  RRKNFRFFLLLQSNRCTCFAPRFVACL-------NNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKPRNSASRAPEP
        R+K  RF  LL  N    F PR ++         NND SV+  R                           Q+ +DP+E+L+  GVD KPR  +  + EP
Subjt:  RRKNFRFFLLLQSNRCTCFAPRFVACL-------NNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKPRNSASRAPEP

Query:  RSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSK
        RSWFGPNGQYI+ELPCP+CRGRGY  C+ CGIERSR DC  C GKGI+TC +CLGD VIWEESIDERPWEKARS+SP R+KEDDEVDNLEIK  +++KSK
Subjt:  RSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSK

Query:  RVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG
        R+YQSP PEVG KISRSLKSLNAKTG+FSKRMKIIHRDP LHAQRVAAIKKAKG+  ARK  SE++KAFF++P NR +RS++MKG
Subjt:  RVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKG

AT5G51080.1 RNase H family protein6.5e-3736.14Show/hide
Query:  MNCFSQISTY-TRAIFRRTTLVYAASTSIHGCSNSYWTSTFQNLALKAPALDSLCSRFRLRCYSSQKLRKGTSPSPKLDSEPPMESEMGDFFVVRKGDVV
        MN FS+  +Y +  +FR+++ V          S+  W   F   +LK+    +  S   + CYSS+     +  S    S    + E   FFVVRKGD+V
Subjt:  MNCFSQISTY-TRAIFRRTTLVYAASTSIHGCSNSYWTSTFQNLALKAPALDSLCSRFRLRCYSSQKLRKGTSPSPKLDSEPPMESEMGDFFVVRKGDVV

Query:  GVYKSFTDCQAQIGSSICDLPVSVYKGEALPKDTEEYLASFGLKNALYTIKAADMRPGLFGSLEPCTFHDGDTSLKGKASCQDAIKKRSREAIVSENIGS
        G+YK   DCQAQ+GSS+ D PVSVYKG +L KDTEE L++ GLK  LY  +A D++  +FG+L PC F D                              
Subjt:  GVYKSFTDCQAQIGSSICDLPVSVYKGEALPKDTEEYLASFGLKNALYTIKAADMRPGLFGSLEPCTFHDGDTSLKGKASCQDAIKKRSREAIVSENIGS

Query:  TVLTPTSKDPSRKHVKLEVSIVSQALSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVVALLRFRFRGPDIANWNSSCDNGL
            P++     K  +LE S       ++ E+C +EFDGASKGNPG +GA AVL+  DGS++  +R   +G  IA  N++  +GL
Subjt:  TVLTPTSKDPSRKHVKLEVSIVSQALSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVVALLRFRFRGPDIANWNSSCDNGL

AT5G51080.2 RNase H family protein6.5e-3736.14Show/hide
Query:  MNCFSQISTY-TRAIFRRTTLVYAASTSIHGCSNSYWTSTFQNLALKAPALDSLCSRFRLRCYSSQKLRKGTSPSPKLDSEPPMESEMGDFFVVRKGDVV
        MN FS+  +Y +  +FR+++ V          S+  W   F   +LK+    +  S   + CYSS+     +  S    S    + E   FFVVRKGD+V
Subjt:  MNCFSQISTY-TRAIFRRTTLVYAASTSIHGCSNSYWTSTFQNLALKAPALDSLCSRFRLRCYSSQKLRKGTSPSPKLDSEPPMESEMGDFFVVRKGDVV

Query:  GVYKSFTDCQAQIGSSICDLPVSVYKGEALPKDTEEYLASFGLKNALYTIKAADMRPGLFGSLEPCTFHDGDTSLKGKASCQDAIKKRSREAIVSENIGS
        G+YK   DCQAQ+GSS+ D PVSVYKG +L KDTEE L++ GLK  LY  +A D++  +FG+L PC F D                              
Subjt:  GVYKSFTDCQAQIGSSICDLPVSVYKGEALPKDTEEYLASFGLKNALYTIKAADMRPGLFGSLEPCTFHDGDTSLKGKASCQDAIKKRSREAIVSENIGS

Query:  TVLTPTSKDPSRKHVKLEVSIVSQALSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVVALLRFRFRGPDIANWNSSCDNGL
            P++     K  +LE S       ++ E+C +EFDGASKGNPG +GA AVL+  DGS++  +R   +G  IA  N++  +GL
Subjt:  TVLTPTSKDPSRKHVKLEVSIVSQALSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVVALLRFRFRGPDIANWNSSCDNGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCATCGCTCTGTTCCTCAATTCGAGCATTGCCGCCGCACTACTGGCGGCGGAAGAACTTCAGATTCTTCCTATTGCTTCAATCAAACAGATGCACTTGCTTCGC
ACCTCGCTTCGTTGCTTGCTTGAACAACGACGACTCTGTTGCAATACCCAGACCTACGCCGGTATTCACTTTCTCATTTTTTATTTTGGAATTCCACTTTCTGTACTCTT
TTTGTTTACTTCTTCTGGTTTCGCAGCTGGCTTTCGATCCCGCGGAGGATCTGTACGGACTTGGCGTCGATTTAAAACCTAGGAATTCAGCTTCTAGGGCACCTGAACCC
AGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAGTTACCATGTCCAAGTTGCCGAGGTAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGC
TGACTGTTCCGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGTTTGGGGGATCGTGTCATATGGGAAGAGTCTATTGATGAACGACCATGGGAGAAAGCACGCT
CCACTTCTCCATTAAGAATGAAGGAAGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCAAAGCGCGTTTACCAATCACCTCCTCCTGAAGTT
GGTTTAAAGATCAGTCGATCATTAAAAAGTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCCCAGAGAGTGGC
TGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAAGCTTTGAAAGCATTCTTTAACGATCCAGAAAATCGTCGAAAGCGGAGCATTGCAATGA
AAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGGAGAACTTTTGGTGGAAAACAACCCTCTGATGAACTGCTTCTCCCAAATCTCTACCTATACTCGC
GCCATTTTCAGAAGGACCACTCTTGTTTATGCGGCTTCGACCTCCATTCATGGCTGCTCTAATTCCTACTGGACCTCAACCTTTCAAAACCTCGCTCTTAAGGCTCCTGC
TTTAGACTCTTTGTGTTCCAGATTCCGTCTACGGTGCTATTCCTCTCAAAAACTCCGAAAGGGCACTTCTCCTTCACCCAAATTAGATTCTGAACCTCCCATGGAATCAG
AGATGGGCGACTTCTTTGTCGTTCGAAAGGGGGATGTTGTTGGAGTTTATAAAAGTTTTACTGATTGTCAGGCGCAAATTGGATCTTCGATATGTGATCTTCCTGTTAGC
GTGTATAAAGGAGAGGCATTGCCAAAAGACACTGAGGAATATCTTGCTTCCTTCGGGCTTAAGAATGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGGTCTTTT
CGGTTCCCTCGAGCCCTGCACTTTTCATGATGGAGATACTTCTCTTAAAGGTAAGGCTTCTTGCCAGGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTATCAGAAA
ATATTGGGTCAACTGTTTTAACTCCCACATCAAAAGATCCCTCGAGGAAACATGTCAAGCTGGAAGTTTCCATTGTGTCCCAAGCACTATCCTCTAACCGTGAATCTTGC
TTTCTAGAATTTGATGGTGCCTCAAAGGGAAATCCTGGACAAGCTGGGGCAGGAGCTGTTCTGCGAGCTCATGATGGGAGTGTGGTTGCATTGCTACGTTTCCGTTTCCG
TGGCCCTGACATAGCAAACTGGAATTCTAGTTGTGACAATGGACTCAACAATGCAGAAGTTGCATTTTTCCTCCGTGGCCCTCCCAAATCCCCACTGATTTGTTCTGTAA
TTCATTTTCAGTTGAAGGATTATCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCATCGCTCTGTTCCTCAATTCGAGCATTGCCGCCGCACTACTGGCGGCGGAAGAACTTCAGATTCTTCCTATTGCTTCAATCAAACAGATGCACTTGCTTCGC
ACCTCGCTTCGTTGCTTGCTTGAACAACGACGACTCTGTTGCAATACCCAGACCTACGCCGGTATTCACTTTCTCATTTTTTATTTTGGAATTCCACTTTCTGTACTCTT
TTTGTTTACTTCTTCTGGTTTCGCAGCTGGCTTTCGATCCCGCGGAGGATCTGTACGGACTTGGCGTCGATTTAAAACCTAGGAATTCAGCTTCTAGGGCACCTGAACCC
AGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAGTTACCATGTCCAAGTTGCCGAGGTAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGC
TGACTGTTCCGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGTTTGGGGGATCGTGTCATATGGGAAGAGTCTATTGATGAACGACCATGGGAGAAAGCACGCT
CCACTTCTCCATTAAGAATGAAGGAAGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCAAAGCGCGTTTACCAATCACCTCCTCCTGAAGTT
GGTTTAAAGATCAGTCGATCATTAAAAAGTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCCCAGAGAGTGGC
TGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAAGCTTTGAAAGCATTCTTTAACGATCCAGAAAATCGTCGAAAGCGGAGCATTGCAATGA
AAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGGAGAACTTTTGGTGGAAAACAACCCTCTGATGAACTGCTTCTCCCAAATCTCTACCTATACTCGC
GCCATTTTCAGAAGGACCACTCTTGTTTATGCGGCTTCGACCTCCATTCATGGCTGCTCTAATTCCTACTGGACCTCAACCTTTCAAAACCTCGCTCTTAAGGCTCCTGC
TTTAGACTCTTTGTGTTCCAGATTCCGTCTACGGTGCTATTCCTCTCAAAAACTCCGAAAGGGCACTTCTCCTTCACCCAAATTAGATTCTGAACCTCCCATGGAATCAG
AGATGGGCGACTTCTTTGTCGTTCGAAAGGGGGATGTTGTTGGAGTTTATAAAAGTTTTACTGATTGTCAGGCGCAAATTGGATCTTCGATATGTGATCTTCCTGTTAGC
GTGTATAAAGGAGAGGCATTGCCAAAAGACACTGAGGAATATCTTGCTTCCTTCGGGCTTAAGAATGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGGTCTTTT
CGGTTCCCTCGAGCCCTGCACTTTTCATGATGGAGATACTTCTCTTAAAGGTAAGGCTTCTTGCCAGGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTATCAGAAA
ATATTGGGTCAACTGTTTTAACTCCCACATCAAAAGATCCCTCGAGGAAACATGTCAAGCTGGAAGTTTCCATTGTGTCCCAAGCACTATCCTCTAACCGTGAATCTTGC
TTTCTAGAATTTGATGGTGCCTCAAAGGGAAATCCTGGACAAGCTGGGGCAGGAGCTGTTCTGCGAGCTCATGATGGGAGTGTGGTTGCATTGCTACGTTTCCGTTTCCG
TGGCCCTGACATAGCAAACTGGAATTCTAGTTGTGACAATGGACTCAACAATGCAGAAGTTGCATTTTTCCTCCGTGGCCCTCCCAAATCCCCACTGATTTGTTCTGTAA
TTCATTTTCAGTTGAAGGATTATCACTGA
Protein sequenceShow/hide protein sequence
MFSSLCSSIRALPPHYWRRKNFRFFLLLQSNRCTCFAPRFVACLNNDDSVAIPRPTPVFTFSFFILEFHFLYSFCLLLLVSQLAFDPAEDLYGLGVDLKPRNSASRAPEP
RSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEV
GLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKGDSDVEYVERRAITGELLVENNPLMNCFSQISTYTR
AIFRRTTLVYAASTSIHGCSNSYWTSTFQNLALKAPALDSLCSRFRLRCYSSQKLRKGTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDLPVS
VYKGEALPKDTEEYLASFGLKNALYTIKAADMRPGLFGSLEPCTFHDGDTSLKGKASCQDAIKKRSREAIVSENIGSTVLTPTSKDPSRKHVKLEVSIVSQALSSNRESC
FLEFDGASKGNPGQAGAGAVLRAHDGSVVALLRFRFRGPDIANWNSSCDNGLNNAEVAFFLRGPPKSPLICSVIHFQLKDYH