CuGenDBv2

Gene ID	HG10022300
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Reticulon domain-containing protein
Genome location	Chr05:22863520..22866656
RNA-Seq Expression	HG10022300
Synteny	HG10022300
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR003388 - Reticulon IPR044177 - Reticulon-like protein B22/B23

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008465703.1 PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]

1.4e-81

93.6

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Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MA+R+INCKTEVGKPFVAL CGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISPFL+RGN+ T HQD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

XP_011655303.1 reticulon-like protein B22 [Cucumis sativus]

2.9e-82

93.6

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Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MA+R+INCKTEVGKPFVALICGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISP L+RGN+ T HQDDI
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

XP_022150304.1 reticulon-like protein B22 [Momordica charantia]

3.7e-77

87.21

Show/hide

Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANRTI+  T++GKP VALICGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S S+ PF +RGNDPT HQD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

XP_022952032.1 reticulon-like protein B22 isoform X1 [Cucurbita moschata]

2.5e-81

93.6

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Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR+I+CKTEVGKP VALICGSLVYYHCAYRNSSLLSLVADV IVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFL+RGNDP  HQD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

XP_038889154.1 reticulon-like protein B22 [Benincasa hispida]

4.8e-85

95.93

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Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANRTINCKTEVGKPFVALICGSL+YYHCAYRNSSLLSLVADV IVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSM+AWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPF++RGNDPT HQD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQM7 Reticulon domain-containing protein

1.4e-82

93.6

Show/hide

Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MA+R+INCKTEVGKPFVALICGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISP L+RGN+ T HQDDI
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

A0A1S3CPH6 reticulon-like protein B22 isoform X2

7.0e-82

93.6

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Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MA+R+INCKTEVGKPFVAL CGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISPFL+RGN+ T HQD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

A0A6J1D9M0 reticulon-like protein B22

1.8e-77

87.21

Show/hide

Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANRTI+  T++GKP VALICGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S S+ PF +RGNDPT HQD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

A0A6J1GJ96 reticulon-like protein B22 isoform X1

1.2e-81

93.6

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Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR+I+CKTEVGKP VALICGSLVYYHCAYRNSSLLSLVADV IVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFL+RGNDP  HQD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

A0A6J1I734 reticulon-like protein B22 isoform X1

1.2e-81

93.6

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Query:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR+I+CKTEVGKP VALICGSLVYYHCAYRNSSLLSLVADV IVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI
        ATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFL+RGNDP  HQD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

SwissProt top hits

e value

%identity

Alignment

P0C941 Reticulon-like protein B23

2.3e-50

73.19

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Query:  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVY+HCA RN++LLSL++DVLIVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
        KVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS

Q8GWH5 Reticulon-like protein B22

2.0e-54

69.38

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Query:  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVYYHCAYRN++LLSL +DV IVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQD
        KVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   LKRGN     Q+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQD

Arabidopsis top hits

e value

%identity

Alignment

AT1G16825.1 Reticulon family protein

1.7e-51

73.19

Show/hide

Query:  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVY+HCA RN++LLSL++DVLIVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
        KVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS

AT1G78895.1 Reticulon family protein

1.4e-55

69.38

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Query:  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVYYHCAYRN++LLSL +DV IVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQD
        KVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   LKRGN     Q+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQD

Sequences

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CDS sequence

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ATGGCGAATCGCACGATCAACTGCAAGACAGAAGTAGGCAAACCCTTTGTAGCTTTGATTTGCGGTTCATTGGTTTATTACCATTGCGCCTATCGAAATTCCAGTCTCCT
CTCCCTTGTCGCTGACGTTTTGATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGGTACCAGTGGACCCTCTTGAGTGGCAAA
TATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCAACAGGGCATGATAAGAGGCTTTTTGTT
AAGGTCGTTGTTTGCCTTTACGCTCTCTCAGTGCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAA
TTCTGAGTCAATAAGTGCTTCTATTTCTCCTTTCCTTAAGAGAGGAAACGACCCTACTCCACATCAAGATGACATCTAA

mRNA sequence

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Protein sequence

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MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

HG10022300 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome