; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022370 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022370
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr05:23661547..23662398
RNA-Seq ExpressionHG10022370
SyntenyHG10022370
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0000932 - P-body (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]4.9e-8765.88Show/hide
Query:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS
        M+ +RQVW HNL QEL +L+  L KFPV+A DTEFPGFLRST R AP E  Y+DLKFN+NHLK LQLGLTL DEN +VG++W F FSDFDE  D  SP+S
Subjt:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS

Query:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL
        IQ+LKN +GF+F K RK+GIPS  FRRAFLP+  SNRITKW+TFHG YDVAYLL LMMI+ MPES++EFA  AQR LGTV DLKHM R    L NGELGL
Subjt:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL

Query:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        ++LA+LLNV  N    + GSDSLL A AYAK+K   K S++  DG+LYG HYRI+
Subjt:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

KAE8649090.1 hypothetical protein Csa_014788 [Cucumis sativus]1.8e-8161.78Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQF
        +RQVW HNL QELA+L+  L KFPV+  DTEFPGFLRSTPR AP E  Y+DLKFNVNHLK LQLGLTL DEN +VG++W F FSDFDE  D+ SP+S+Q+
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQF

Query:  LK-NRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKL
        LK N+GF+F K RK+GIPS  FRRAFLP+  SNRITKW+TFHG YDVAYLL LM+IK MPES++EFA  AQR LGTV DLK+M  +  +L  GELGL++L
Subjt:  LK-NRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKL

Query:  AKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQRPVHGNI
        A+LL+V  N      GSDSLL A AY K+K + K+S+++  G+LY    +    V G I
Subjt:  AKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQRPVHGNI

XP_004151393.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]1.1e-8363.89Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQF
        +RQVW HNL QELA+L+  L KFPV+  DTEFPGFLRSTPR AP E  Y+DLKFNVNHLK LQLGLTL DEN +VG++W F FSDFDE  D+ SP+S+Q+
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQF

Query:  LK-NRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKL
        LK N+GF+F K RK+GIPS  FRRAFLP+  SNRITKW+TFHG YDVAYLL LM+IK MPES++EFA  AQR LGTV DLK+M  +  +L  GELGL++L
Subjt:  LK-NRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKL

Query:  AKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        A+LL+V  N      GSDSLL A AY K+K + K+S+++  G+LYG  YRI+
Subjt:  AKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]2.9e-8765.49Show/hide
Query:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS
        M+ +R+VW HN  QELA+L+  L KFPV+A DTEFPGFLRSTPR AP E  Y+DLKFN+NHLK LQLGLTL DEN +VG++W F FSDFDE  D  SP+S
Subjt:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS

Query:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL
        IQ+LKN +GF+F K RK+GIPS  FRRAFLP+  SNRITKW+TFHG YDVAYLL LMMI+ MPES++EFA  AQR LGTV DLKHM R    L NGELGL
Subjt:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL

Query:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        ++LA+LLNV  N    + GSDSLL A AYAK+K   K S++  DG+LYG +YRI+
Subjt:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

XP_038890962.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]1.9e-9166.27Show/hide
Query:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS
        M ++RQVWSHNL++ELA+ +  LS+FPV+  DTEFPGF+RSTPR AP E  Y+DLKFN+NHLK LQLGLTL DENGNVGMTWEF FSDFDE  D+ +P+S
Subjt:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS

Query:  IQFLKNRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLE
        IQFLKN+G DF K R+EGI S  F+ AFLP+ CSNRI KWVTFHG YDVAYLL LM+IK MPESV+EFA  A+  LGTV DLK++ R    L NGELGL+
Subjt:  IQFLKNRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLE

Query:  KLAKLLNVERNGIAHH-AGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        KLAKLLN+  +   HH AG DSLL ASAYAK+K + + S+++ DG+LYGL+YRI+
Subjt:  KLAKLLNVERNGIAHH-AGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

TrEMBL top hitse value%identityAlignment
A0A0A0KTU4 Poly(A)-specific ribonuclease5.5e-8463.89Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQF
        +RQVW HNL QELA+L+  L KFPV+  DTEFPGFLRSTPR AP E  Y+DLKFNVNHLK LQLGLTL DEN +VG++W F FSDFDE  D+ SP+S+Q+
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQF

Query:  LK-NRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKL
        LK N+GF+F K RK+GIPS  FRRAFLP+  SNRITKW+TFHG YDVAYLL LM+IK MPES++EFA  AQR LGTV DLK+M  +  +L  GELGL++L
Subjt:  LK-NRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKL

Query:  AKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        A+LL+V  N      GSDSLL A AY K+K + K+S+++  G+LYG  YRI+
Subjt:  AKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

A0A1S3BY95 Poly(A)-specific ribonuclease1.4e-8765.49Show/hide
Query:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS
        M+ +R+VW HN  QELA+L+  L KFPV+A DTEFPGFLRSTPR AP E  Y+DLKFN+NHLK LQLGLTL DEN +VG++W F FSDFDE  D  SP+S
Subjt:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS

Query:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL
        IQ+LKN +GF+F K RK+GIPS  FRRAFLP+  SNRITKW+TFHG YDVAYLL LMMI+ MPES++EFA  AQR LGTV DLKHM R    L NGELGL
Subjt:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL

Query:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        ++LA+LLNV  N    + GSDSLL A AYAK+K   K S++  DG+LYG +YRI+
Subjt:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

A0A5A7TN62 Poly(A)-specific ribonuclease2.4e-8765.88Show/hide
Query:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS
        M+ +RQVW HNL QEL +L+  L KFPV+A DTEFPGFLRST R AP E  Y+DLKFN+NHLK LQLGLTL DEN +VG++W F FSDFDE  D  SP+S
Subjt:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS

Query:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL
        IQ+LKN +GF+F K RK+GIPS  FRRAFLP+  SNRITKW+TFHG YDVAYLL LMMI+ MPES++EFA  AQR LGTV DLKHM R    L NGELGL
Subjt:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL

Query:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        ++LA+LLNV  N    + GSDSLL A AYAK+K   K S++  DG+LYG HYRI+
Subjt:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

A0A5D3D333 Poly(A)-specific ribonuclease1.4e-8765.49Show/hide
Query:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS
        M+ +R+VW HN  QELA+L+  L KFPV+A DTEFPGFLRSTPR AP E  Y+DLKFN+NHLK LQLGLTL DEN +VG++W F FSDFDE  D  SP+S
Subjt:  MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSS

Query:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL
        IQ+LKN +GF+F K RK+GIPS  FRRAFLP+  SNRITKW+TFHG YDVAYLL LMMI+ MPES++EFA  AQR LGTV DLKHM R    L NGELGL
Subjt:  IQFLKN-RGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGL

Query:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        ++LA+LLNV  N    + GSDSLL A AYAK+K   K S++  DG+LYG +YRI+
Subjt:  EKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

A0A6J1HSR3 Poly(A)-specific ribonuclease1.6e-7859.36Show/hide
Query:  RQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSI-QF
        R VWSHNL +E+ ++  CLS+FP+VA DTEFPGFLR TP+    E+ Y+ L+FNVN L  LQLGLTLTDENG +GMTWEFNF DFD+  ++    S+  F
Subjt:  RQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSI-QF

Query:  LKNRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKLA
        LKN+GF+FN LR  GI    FRR F P+  S RI +W+TFHG YD+AYL+    I CMP S+  FA  A  LLGTV DLKHMARYS+ L NG LGL+KLA
Subjt:  LKNRGFDFNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKLA

Query:  KLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ
        K+L V R G AH AGSDSLLTAS YAK++ + K+  K  +G+LYGL Y IQ
Subjt:  KLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQ

SwissProt top hitse value%identityAlignment
Q9LXM4 Putative CCR4-associated factor 1 homolog 84.1e-4443.95Show/hide
Query:  LAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQFLKNRGFDFNKLR
        +++++ CL  +  +A DTEFP  LR T + A  E+ Y D+ F+V+  K +QLGLTL D NG +G TWE NFSDF   DD  +  SI+FL+  G D  K+R
Subjt:  LAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQFLKNRGFDFNKLR

Query:  KEGIP-SGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKLAKLLNVERNGIA
        +EGI   G F   F  L  + R   WVTFHG YD+AYLL     + +P +   F+    R+LG+V+DLK MA     L +  LGLE LA    + R G A
Subjt:  KEGIP-SGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKLAKLLNVERNGIA

Query:  HHAGSDSLLTASAYAKIKNVFKI
        HHAGS++ LTA  +AK+ + F +
Subjt:  HHAGSDSLLTASAYAKIKNVFKI

Q9S9P2 Probable CCR4-associated factor 1 homolog 23.5e-4338.78Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--------PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNV-------GMTWEFNFSD
        IR+VW+HNL QE+A+++  +  FP VA DTEFPG +  T        P     E  Y+ LK NVN LK +QLGLTL+DE GN+          W+FNF +
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--------PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNV-------GMTWEFNFSD

Query:  FDETDDIHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMAR
        F+   D+ +  SI+ L+    D  K  + G+ +  F    +      N    WVTFH  YD  YLL L+  K +PE + +F  + ++    V+D+K++  
Subjt:  FDETDDIHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMAR

Query:  YSNKLQNGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKI-STKHFDGYLYGL
        +   L     GLEK+A+LL V+R GI+H AGSDSLLT   + K+K  F   S   + G+L+GL
Subjt:  YSNKLQNGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKI-STKHFDGYLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.6e-4340.86Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG-------MTWEFNFSDFDETDD
        IR+VW+ NL +E+ ++   +  FP VA DTEFPG +        +  +  YE LK NVN LK +QLGLT ++E GN+          W+FNF +FD   D
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG-------MTWEFNFSDFDETDD

Query:  IHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQ
        I +  SI+ LK  G D  K   +GI S  F    +      N    WVTFH  YD  YLL L+  + +P+S  +F         TV+D+KH+ ++ N L 
Subjt:  IHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQ

Query:  NGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKH-FDGYLYGL
            GL KLA+LL VER GI H AGSDSLLT+  + K+K  F +   H + G LYGL
Subjt:  NGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKH-FDGYLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 15.7e-4639.44Show/hide
Query:  IIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQ
        + R+VW  N+ +E+A +  CL +FP++AFDTE+PG +  T  D+  ++ Y  +K NV + K +Q G TL +  G +G  WE NFS+F +  D  +  SI+
Subjt:  IIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQ

Query:  FLKNRGFDFNKLRKEGIPSGVFRRAFLP----LCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELG
        FL+  G D  K+R EG+   +F   F P    +  S +  ++VTF G YD AY L+++    +PE+  EFA +  ++ G V+D K MA +   L    LG
Subjt:  FLKNRGFDFNKLRKEGIPSGVFRRAFLP----LCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELG

Query:  LEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGL
        L KLA+LL + R G AHHAGSDSL+TA  + K+K+V++  ++   G +YG+
Subjt:  LEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 74.1e-4440.82Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG--------MTWEFNFSDFDETD
        IR+VW+ NL  E+A++   +  FP VA DTEFPG +           E  YE LK NVN LK +QLGLT +DE GN+           W+FNF +FD   
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG--------MTWEFNFSDFDETD

Query:  DIHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKL
        DI++  SI+ L+  G DF K  + GI S  F    +      N    WVTFH  YD  YLL L+  + +PE+   F          V+D+KH+ ++ N L
Subjt:  DIHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKL

Query:  QNGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKI-KNVFKISTKHFDGYLYGLHYRIQRPVH
             GL KLA+LL+VER GI H AGSDSLLT+  + K+ +N F  S + + G LYGL     + VH
Subjt:  QNGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKI-KNVFKISTKHFDGYLYGLHYRIQRPVH

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.1e-4739.44Show/hide
Query:  IIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQ
        + R+VW  N+ +E+A +  CL +FP++AFDTE+PG +  T  D+  ++ Y  +K NV + K +Q G TL +  G +G  WE NFS+F +  D  +  SI+
Subjt:  IIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQ

Query:  FLKNRGFDFNKLRKEGIPSGVFRRAFLP----LCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELG
        FL+  G D  K+R EG+   +F   F P    +  S +  ++VTF G YD AY L+++    +PE+  EFA +  ++ G V+D K MA +   L    LG
Subjt:  FLKNRGFDFNKLRKEGIPSGVFRRAFLP----LCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELG

Query:  LEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGL
        L KLA+LL + R G AHHAGSDSL+TA  + K+K+V++  ++   G +YG+
Subjt:  LEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKHFDGYLYGL

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-4440.86Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG-------MTWEFNFSDFDETDD
        IR+VW+ NL +E+ ++   +  FP VA DTEFPG +        +  +  YE LK NVN LK +QLGLT ++E GN+          W+FNF +FD   D
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG-------MTWEFNFSDFDETDD

Query:  IHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQ
        I +  SI+ LK  G D  K   +GI S  F    +      N    WVTFH  YD  YLL L+  + +P+S  +F         TV+D+KH+ ++ N L 
Subjt:  IHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQ

Query:  NGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKH-FDGYLYGL
            GL KLA+LL VER GI H AGSDSLLT+  + K+K  F +   H + G LYGL
Subjt:  NGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKH-FDGYLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-4440.86Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG-------MTWEFNFSDFDETDD
        IR+VW+ NL +E+ ++   +  FP VA DTEFPG +        +  +  YE LK NVN LK +QLGLT ++E GN+          W+FNF +FD   D
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG-------MTWEFNFSDFDETDD

Query:  IHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQ
        I +  SI+ LK  G D  K   +GI S  F    +      N    WVTFH  YD  YLL L+  + +P+S  +F         TV+D+KH+ ++ N L 
Subjt:  IHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQ

Query:  NGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKH-FDGYLYGL
            GL KLA+LL VER GI H AGSDSLLT+  + K+K  F +   H + G LYGL
Subjt:  NGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKIKNVFKISTKH-FDGYLYGL

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-4540.82Show/hide
Query:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG--------MTWEFNFSDFDETD
        IR+VW+ NL  E+A++   +  FP VA DTEFPG +           E  YE LK NVN LK +QLGLT +DE GN+           W+FNF +FD   
Subjt:  IRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRST--PRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVG--------MTWEFNFSDFDETD

Query:  DIHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKL
        DI++  SI+ L+  G DF K  + GI S  F    +      N    WVTFH  YD  YLL L+  + +PE+   F          V+D+KH+ ++ N L
Subjt:  DIHSPSSIQFLKNRGFDFNKLRKEGIPSGVFRRAFLPL-CCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKL

Query:  QNGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKI-KNVFKISTKHFDGYLYGLHYRIQRPVH
             GL KLA+LL+VER GI H AGSDSLLT+  + K+ +N F  S + + G LYGL     + VH
Subjt:  QNGELGLEKLAKLLNVERNGIAHHAGSDSLLTASAYAKI-KNVFKISTKHFDGYLYGLHYRIQRPVH

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-4543.95Show/hide
Query:  LAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQFLKNRGFDFNKLR
        +++++ CL  +  +A DTEFP  LR T + A  E+ Y D+ F+V+  K +QLGLTL D NG +G TWE NFSDF   DD  +  SI+FL+  G D  K+R
Subjt:  LAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQFLKNRGFDFNKLR

Query:  KEGIP-SGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKLAKLLNVERNGIA
        +EGI   G F   F  L  + R   WVTFHG YD+AYLL     + +P +   F+    R+LG+V+DLK MA     L +  LGLE LA    + R G A
Subjt:  KEGIP-SGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKLAKLLNVERNGIA

Query:  HHAGSDSLLTASAYAKIKNVFKI
        HHAGS++ LTA  +AK+ + F +
Subjt:  HHAGSDSLLTASAYAKIKNVFKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCATTCGACAAGTTTGGTCTCATAATTTGTTTCAAGAATTGGCCGTTCTCGACGGTTGTCTCTCGAAGTTTCCGGTGGTCGCTTTCGACACCGAGTTCCCCGG
CTTTCTCCGATCCACCCCAAGAGATGCTCCATTAGAACAAACCTACGAAGATTTAAAATTCAATGTGAATCACTTAAAGCCTCTTCAATTGGGTCTCACTTTAACCGACG
AGAATGGAAATGTCGGCATGACATGGGAGTTCAACTTCAGTGATTTTGATGAGACTGATGACATCCATAGTCCGTCATCTATACAGTTCTTGAAGAACAGAGGATTTGAT
TTCAACAAACTAAGAAAAGAAGGGATTCCATCTGGTGTATTCCGAAGGGCATTTTTACCCCTTTGTTGTAGTAATCGAATCACCAAATGGGTCACCTTCCACGGCTTCTA
CGACGTCGCTTACCTCCTCAACCTAATGATGATCAAATGCATGCCGGAGTCCGTCATGGAATTTGCCGCCAAAGCACAGCGTCTTCTCGGCACTGTTTTCGACCTCAAGC
ACATGGCTCGCTACAGCAACAAATTACAAAATGGCGAACTTGGGCTTGAAAAGTTAGCCAAGTTACTCAATGTGGAGCGTAACGGAATTGCCCATCATGCTGGTTCTGAT
AGCTTGTTGACGGCTTCTGCGTATGCAAAGATCAAGAACGTGTTCAAGATTTCGACAAAGCATTTTGATGGGTATCTGTATGGCTTGCATTATAGAATCCAACGGCCAGT
TCATGGGAACATCATCCGTCCATTTTTTCTGTCACCTTTTGGACCTAGTAGGTTTTATATTGGTAATGTTATGGTTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCATTCGACAAGTTTGGTCTCATAATTTGTTTCAAGAATTGGCCGTTCTCGACGGTTGTCTCTCGAAGTTTCCGGTGGTCGCTTTCGACACCGAGTTCCCCGG
CTTTCTCCGATCCACCCCAAGAGATGCTCCATTAGAACAAACCTACGAAGATTTAAAATTCAATGTGAATCACTTAAAGCCTCTTCAATTGGGTCTCACTTTAACCGACG
AGAATGGAAATGTCGGCATGACATGGGAGTTCAACTTCAGTGATTTTGATGAGACTGATGACATCCATAGTCCGTCATCTATACAGTTCTTGAAGAACAGAGGATTTGAT
TTCAACAAACTAAGAAAAGAAGGGATTCCATCTGGTGTATTCCGAAGGGCATTTTTACCCCTTTGTTGTAGTAATCGAATCACCAAATGGGTCACCTTCCACGGCTTCTA
CGACGTCGCTTACCTCCTCAACCTAATGATGATCAAATGCATGCCGGAGTCCGTCATGGAATTTGCCGCCAAAGCACAGCGTCTTCTCGGCACTGTTTTCGACCTCAAGC
ACATGGCTCGCTACAGCAACAAATTACAAAATGGCGAACTTGGGCTTGAAAAGTTAGCCAAGTTACTCAATGTGGAGCGTAACGGAATTGCCCATCATGCTGGTTCTGAT
AGCTTGTTGACGGCTTCTGCGTATGCAAAGATCAAGAACGTGTTCAAGATTTCGACAAAGCATTTTGATGGGTATCTGTATGGCTTGCATTATAGAATCCAACGGCCAGT
TCATGGGAACATCATCCGTCCATTTTTTCTGTCACCTTTTGGACCTAGTAGGTTTTATATTGGTAATGTTATGGTTAATTAG
Protein sequenceShow/hide protein sequence
MAIIRQVWSHNLFQELAVLDGCLSKFPVVAFDTEFPGFLRSTPRDAPLEQTYEDLKFNVNHLKPLQLGLTLTDENGNVGMTWEFNFSDFDETDDIHSPSSIQFLKNRGFD
FNKLRKEGIPSGVFRRAFLPLCCSNRITKWVTFHGFYDVAYLLNLMMIKCMPESVMEFAAKAQRLLGTVFDLKHMARYSNKLQNGELGLEKLAKLLNVERNGIAHHAGSD
SLLTASAYAKIKNVFKISTKHFDGYLYGLHYRIQRPVHGNIIRPFFLSPFGPSRFYIGNVMVN