; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022392 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022392
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionmRNA decay activator protein ZFP36L2-like isoform X2
Genome locationChr05:23845610..23847976
RNA-Seq ExpressionHG10022392
SyntenyHG10022392
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07952.1 tristetraprolin-like isoform X2 [Cucumis melo var. makuwa]2.0e-13779.64Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI
        MED Q KRSS+TSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMNHYASST GSNSFG RG G  LSPLSAIENLETP ++SPQI
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI

Query:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN
        YGTP+KVDEEVIVMDGILI+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSGSCRFG+KCQFAHGKEDLRPGRLPVRTK KF+E YGSKFRN
Subjt:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN

Query:  NHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETESTKREDVDQHIH
        NH  +GI+ATTT    SN VDTITKTE+SKREGL  TSS+  R   TNT P+LISTISII           DWSPEDDGIKI VP TESTKREDV+QHIH
Subjt:  NHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETESTKREDVDQHIH

Query:  GVLYGSTTERTKTRLPVFTQLCSEKLQQE
         VLYGSTTERTK RLPVF+QLCSE+LQ+E
Subjt:  GVLYGSTTERTKTRLPVFTQLCSEKLQQE

XP_004148935.1 uncharacterized protein LOC101215865 [Cucumis sativus]6.2e-13983.02Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI
        MED QGKRSSKTSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMNHYASST GSNSFG RG G  LSPLSAIENLETP IRSPQI
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI

Query:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN
        YGTP+KVDEEVIVMDGILI+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSG+CRFG+KCQFAHGKEDLRPGRLPVRTK KF+E YGSKFRN
Subjt:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN

Query:  NHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERT
        NH  TGIAATTT    SN VDTITKTE+SKR GL  TSS    H  TN  P+LISTISII+WSPEDDGIKIAVP TESTKREDV+QHIH VLYGSTTERT
Subjt:  NHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERT

Query:  KTRLPVFTQLCSEKLQQE
        K RLPVF Q+CSE+LQ+E
Subjt:  KTRLPVFTQLCSEKLQQE

XP_022154583.1 uncharacterized protein LOC111021811 [Momordica charantia]6.0e-11864.66Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT-------------------------------------------
        ME  QGKRSSKTSIIKGLN +V PINIQMDNHLVIGGT HYHQETNCKSPT+ DRY+                                           
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT-------------------------------------------

Query:  --IMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
          IMNHYASST  S+SFG RG GS LSPLSAIENLETP  RSPQIYGTPVKVDEEVIVMDGILI+S+PGGAKT+RS  +S +GGG LSGKN YRTDICR 
Subjt:  --IMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY-----GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSL
        WEDSGSCR+GHKCQFAHGKE+LRP RLPV+ KPK +++Y      SKF ++H    +A TT+ S  +DTI  +E+S+ EG     + SIRHM  NTKPSL
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY-----GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSL

Query:  ISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
        ISTISI+DWSPEDDGIKI +P ++STKREDV+Q+IH VLYGST ERTK RLPVFTQLCSEKLQQ+
Subjt:  ISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE

XP_023536031.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo]8.4e-10461.05Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------
        MED QGKRSSK +IIKGLNA+VRPI IQMDNHLVIGGT HYHQETN K PTI DRY                                            
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------

Query:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
         +I+NH+ASST GS+SFG R  GS LSPLSAIENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDSGSGGG    KNQYRTDICR 
Subjt:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLIS
        WEDSGSCRFGHKCQFAHGKE+LRP  LP++TKPKF E Y   G K RNNH  TGIAA TTQSNS+D   KTE+S+R      S  SI ++NT        
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLIS

Query:  TISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ
             DWSPEDD I++ VPET+ST R DVDQHIH VLYGSTTERTK RL VF QLCS + ++
Subjt:  TISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ

XP_038897010.1 uncharacterized protein LOC120085195 [Benincasa hispida]8.6e-14985.76Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI
        MED QGKRS+KTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNC+SPTI DRYTIMNHYASST G NSFG RG GSPLSPLSAIENLETP +RSPQI
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI

Query:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN
        YGTPVKVDEEVIVMDGILI+SIPGGAKT+RSPLDSGSGGG  S KNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRP R+PVRTKPKF+E YG KFRN
Subjt:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN

Query:  NHLQTGIAATTTQSNSVDTITKTEISKREGL-GTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKT
        +H  TGIAA TT SN +DT  KTE+S+RE L  TTSS S+RHM  NTKPSLI TISIIDWSPEDDGIKI VP+TE+TKREDV+Q+IHGVLYGSTTERTK 
Subjt:  NHLQTGIAATTTQSNSVDTITKTEISKREGL-GTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKT

Query:  RLPVFTQLCSEKLQQE
        RLPVFTQLCSEKLQQE
Subjt:  RLPVFTQLCSEKLQQE

TrEMBL top hitse value%identityAlignment
A0A0A0K529 C3H1-type domain-containing protein3.0e-10781.54Show/hide
Query:  MNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWED
        MNHYASST GSNSFG RG G  LSPLSAIENLETP IRSPQIYGTP+KVDEEVIVMDGILI+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWED
Subjt:  MNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWED

Query:  SGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTIS
        SG+CRFG+KCQFAHGKEDLRPGRLPVRTK KF+E YGSKFRNNH  TGIAATTT    SN VDTITKTE+SKR GL  TSS    H  TN  P+LISTIS
Subjt:  SGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTIS

Query:  IIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
        II+WSPEDDGIKIAVP TESTKREDV+QHIH VLYGSTTERTK RLPVF Q+CSE+LQ+E
Subjt:  IIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE

A0A5D3C9H3 Tristetraprolin-like isoform X29.6e-13879.64Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI
        MED Q KRSS+TSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMNHYASST GSNSFG RG G  LSPLSAIENLETP ++SPQI
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI

Query:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN
        YGTP+KVDEEVIVMDGILI+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSGSCRFG+KCQFAHGKEDLRPGRLPVRTK KF+E YGSKFRN
Subjt:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN

Query:  NHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETESTKREDVDQHIH
        NH  +GI+ATTT    SN VDTITKTE+SKREGL  TSS+  R   TNT P+LISTISII           DWSPEDDGIKI VP TESTKREDV+QHIH
Subjt:  NHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETESTKREDVDQHIH

Query:  GVLYGSTTERTKTRLPVFTQLCSEKLQQE
         VLYGSTTERTK RLPVF+QLCSE+LQ+E
Subjt:  GVLYGSTTERTKTRLPVFTQLCSEKLQQE

A0A6J1DKP7 uncharacterized protein LOC1110218112.9e-11864.66Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT-------------------------------------------
        ME  QGKRSSKTSIIKGLN +V PINIQMDNHLVIGGT HYHQETNCKSPT+ DRY+                                           
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT-------------------------------------------

Query:  --IMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
          IMNHYASST  S+SFG RG GS LSPLSAIENLETP  RSPQIYGTPVKVDEEVIVMDGILI+S+PGGAKT+RS  +S +GGG LSGKN YRTDICR 
Subjt:  --IMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY-----GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSL
        WEDSGSCR+GHKCQFAHGKE+LRP RLPV+ KPK +++Y      SKF ++H    +A TT+ S  +DTI  +E+S+ EG     + SIRHM  NTKPSL
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY-----GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSL

Query:  ISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
        ISTISI+DWSPEDDGIKI +P ++STKREDV+Q+IH VLYGST ERTK RLPVFTQLCSEKLQQ+
Subjt:  ISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE

A0A6J1ICU5 uncharacterized protein LOC111472626 isoform X13.5e-10360.5Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------
        MED QGKRSSK SIIKGLN +VRPI IQMDNHLVIGGT HYHQETN K PTI DRY                                            
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------

Query:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
         +I+NH+ASST GS+SFG R  GS LSPLSA+ENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDSGSGGG    KNQYRTDICR 
Subjt:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLIS
        WEDSGSCRFGHKCQFAHGKE+LRP  LPV+TKPKF E Y   G K RNNH  TGIAA TTQSNS+    KTE+++R      S  SI ++NT        
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLIS

Query:  TISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ
             DWSP+DDGI++ VPET+ST R DVDQHI  VLYGSTTER K RLPVF QLCS +L++
Subjt:  TISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ

A0A6J1IEX1 uncharacterized protein LOC111472616 isoform X12.6e-10360.5Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------
        MED QGKRSSK SIIKGLN +VRPI IQMDNHLVIGGT HYHQETN K PTI DRY                                            
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------

Query:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
         +I+NH+ASST GS+SFG R  GS LSPLSA+ENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDSGSGGG    KNQYRTDICR 
Subjt:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLIS
        WEDSGSCRFGHKCQFAHGKE+LRP  LPV+TKPKF E Y   G K RNNH  TGIAA TTQSNS+    KTE+++R      S  SI ++NT        
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLIS

Query:  TISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ
             DWSP+DDGI++ VPET+ST R DVDQHI  VLYGSTTER K RLPVF QLCS +L++
Subjt:  TISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ

SwissProt top hitse value%identityAlignment
P47974 mRNA decay activator protein ZFP36L21.3e-0651.22Show/hide
Query:  GGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR
        GGG      +Y+T++CR +E+SG+C++G KCQFAHG  +LR
Subjt:  GGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR

P47979 Zinc finger protein zfs12.2e-0649.09Show/hide
Query:  PLDSGSGGGLL-SGKNQ-YRTDICRYWEDSGSCRFGHKCQFAHGKEDLR-PGRLP
        P  SGS  G+  +GK   Y+T+ C+ W+ SG+CR+G KCQFAHG ++L+ P R P
Subjt:  PLDSGSGGGLL-SGKNQ-YRTDICRYWEDSGSCRFGHKCQFAHGKEDLR-PGRLP

P47980 Protein TIS112.9e-0640Show/hide
Query:  NQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN
        ++Y+T++CR +E++G C++G KCQFAHG  +LR     V   PK+   Y   F +
Subjt:  NQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRN

Q5ISE2 mRNA decay activator protein ZFP36L33.4e-0752.38Show/hide
Query:  SGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR
        SG   L+   +Y+T++CR +E+SG C++GHKCQFAHG  +LR
Subjt:  SGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR

Q9XV46 CCCH-type zinc finger protein moe-32.2e-0640Show/hide
Query:  YRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRNNHLQTGI
        Y+T IC+ W +S +C F   C+FAHG+E+LRP +L  R     N  Y +K  + +  TG+
Subjt:  YRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRNNHLQTGI

Arabidopsis top hitse value%identityAlignment
AT1G01350.1 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein2.8e-0432.79Show/hide
Query:  KTVRSPLDSGSGGGL-------LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPG
        +T+ S    GS G L       +S +  Y+ DIC+ ++++G C +G  C+F H + D +PG
Subjt:  KTVRSPLDSGSGGGL-------LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPG

AT1G32360.1 Zinc finger (CCCH-type) family protein4.3e-0547.73Show/hide
Query:  SGSGGGL-LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDL
        SGSG G+ +   + ++T IC  WE +G C FG KC FAHG  +L
Subjt:  SGSGGGL-LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDL

AT1G66810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.9e-0548.39Show/hide
Query:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP
        +T++C  W+++G+C +G  CQFAHG ++LRP
Subjt:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP

AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.5e-0548.39Show/hide
Query:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP
        +T++C  W+++G+C +G  CQFAHG ++LRP
Subjt:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP

AT1G68200.2 Zinc finger C-x8-C-x5-C-x3-H type family protein2.5e-0548.39Show/hide
Query:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP
        +T++C  W+++G+C +G  CQFAHG ++LRP
Subjt:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGG
AACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTC
CTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAA
GTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCA
ATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGG
TTAGAACCAAGCCTAAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATC
ACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCAT
TGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCA
CTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGG
AACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTC
CTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAA
GTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCA
ATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGG
TTAGAACCAAGCCTAAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATC
ACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCAT
TGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCA
CTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAG
Protein sequenceShow/hide protein sequence
MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEE
VIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGSKFRNNHLQTGIAATTTQSNSVDTI
TKTEISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE