; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022484 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022484
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr05:24783540..24786173
RNA-Seq ExpressionHG10022484
SyntenyHG10022484
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0K3Q2 Uncharacterized protein3.5e-3270.19Show/hide
Query:  RRPLSSLRDSFTILQ-----TPRFCIWFEPHPDPIGSGSALVILEVAGPDCTVPRQICTCQATWSQVCLHLVTCPYELLLLLHCFNGFELPVNELCIVPT
        R P  S    F++ Q     TPR CIWF+PHPDPIGSGSALVILEVAG +C V  QIC CQ TWSQVCLHLVT  Y LLLLLHCFN FELPV+ELCIV T
Subjt:  RRPLSSLRDSFTILQ-----TPRFCIWFEPHPDPIGSGSALVILEVAGPDCTVPRQICTCQATWSQVCLHLVTCPYELLLLLHCFNGFELPVNELCIVPT

Query:  TFER
        T+ER
Subjt:  TFER
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCCTTGTAGCCTCCCCTTCAGCCAGTTACAACCCAGCCCCAGCCACCATCTTCCTTCCTTCGATTCTTCTTCCAGCGAACGGCTACGCTCACACCGCACTCCA
CCTCTGGAGACACCCACGAACACCGACGCCAACATTGCCAGCGATCTTCCTTCTCCAACGAACATCGACGACCTGCTGCGTGCGACGCAAACCCGCGACCTTTGACGATC
TGTTCTCCGGCGACAATGCCAACGAACATGAACCACGTCGGAGACCTGTGCGACGGCAGCTGCAAACCCACGAACTGTCCTCCGGCGAAATGCATTCCAGTAGGGTTGGA
GCAGCGTTTTTCCTCTTTCTGACAAGCGCATCTCCCTCTTCTTCTTCGATTCCTAATTCCTCTTTGTCCCAACTTCGAGCCACAGTTCCCACCGACATTCGCCCTGCGAC
AGCTCCTACCACCGTTCGCCCTACTGCAGCTCCCGCCGCCGTTTACCCAGACGCTCGACGTCCTCTATCTTCTCTCCGAGACAGTTTTACCATTCTCCAAACCCCTAGAT
TCTGTATCTGGTTTGAACCGCATCCTGATCCGATTGGAAGTGGATCTGCACTTGTCATTTTAGAAGTGGCTGGGCCTGATTGTACTGTGCCTAGACAAATCTGCACTTGC
CAAGCTACTTGGTCTCAAGTGTGTTTGCATTTGGTTACCTGTCCGTACGAATTGCTTCTACTTCTACATTGTTTCAATGGTTTTGAATTGCCAGTAAATGAATTATGTAT
TGTTCCTACAACTTTTGAAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCCTTGTAGCCTCCCCTTCAGCCAGTTACAACCCAGCCCCAGCCACCATCTTCCTTCCTTCGATTCTTCTTCCAGCGAACGGCTACGCTCACACCGCACTCCA
CCTCTGGAGACACCCACGAACACCGACGCCAACATTGCCAGCGATCTTCCTTCTCCAACGAACATCGACGACCTGCTGCGTGCGACGCAAACCCGCGACCTTTGACGATC
TGTTCTCCGGCGACAATGCCAACGAACATGAACCACGTCGGAGACCTGTGCGACGGCAGCTGCAAACCCACGAACTGTCCTCCGGCGAAATGCATTCCAGTAGGGTTGGA
GCAGCGTTTTTCCTCTTTCTGACAAGCGCATCTCCCTCTTCTTCTTCGATTCCTAATTCCTCTTTGTCCCAACTTCGAGCCACAGTTCCCACCGACATTCGCCCTGCGAC
AGCTCCTACCACCGTTCGCCCTACTGCAGCTCCCGCCGCCGTTTACCCAGACGCTCGACGTCCTCTATCTTCTCTCCGAGACAGTTTTACCATTCTCCAAACCCCTAGAT
TCTGTATCTGGTTTGAACCGCATCCTGATCCGATTGGAAGTGGATCTGCACTTGTCATTTTAGAAGTGGCTGGGCCTGATTGTACTGTGCCTAGACAAATCTGCACTTGC
CAAGCTACTTGGTCTCAAGTGTGTTTGCATTTGGTTACCTGTCCGTACGAATTGCTTCTACTTCTACATTGTTTCAATGGTTTTGAATTGCCAGTAAATGAATTATGTAT
TGTTCCTACAACTTTTGAAAGGTGA
Protein sequenceShow/hide protein sequence
MEGLVASPSASYNPAPATIFLPSILLPANGYAHTALHLWRHPRTPTPTLPAIFLLQRTSTTCCVRRKPATFDDLFSGDNANEHEPRRRPVRRQLQTHELSSGEMHSSRVG
AAFFLFLTSASPSSSSIPNSSLSQLRATVPTDIRPATAPTTVRPTAAPAAVYPDARRPLSSLRDSFTILQTPRFCIWFEPHPDPIGSGSALVILEVAGPDCTVPRQICTC
QATWSQVCLHLVTCPYELLLLLHCFNGFELPVNELCIVPTTFER