| GenBank top hits | e value | %identity | Alignment |
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| KAA0046492.1 putative U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo var. makuwa] | 1.9e-63 | 96.09 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KSRADRKP +GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGGPGGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.9e-63 | 96.09 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KSRADRKP +GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGGPGGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 3.0e-64 | 96.09 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+RADRKPP +GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGGPGGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| XP_022975088.1 sm-like protein LSM4 isoform X1 [Cucurbita maxima] | 7.4e-63 | 94.53 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KSR DRKPP +GRGRGRGREDGPGGRP+KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGG GGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 6.7e-64 | 96.09 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KSRADRKPP +GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDD AKAASGGRGKGGPGGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 9.4e-64 | 96.09 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KSRADRKP +GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGGPGGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| A0A5D3BGF1 U6 snRNA-associated Sm-like protein LSm4 | 9.4e-64 | 96.09 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KSRADRKP +GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGGPGGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 1.4e-64 | 96.09 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+RADRKPP +GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGGPGGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| A0A6J1ID83 U6 snRNA-associated Sm-like protein LSm4 | 3.6e-63 | 94.53 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KSR DRKPP +GRGRGRGREDGPGGRP+KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGG GGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 1.4e-64 | 96.09 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+RADRKPP +GRGRGRGREDGPGGRPAKGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RGFDDGAKAASGGRGKGGPGGKPGANR
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 1.2e-44 | 78.45 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPP +GRGRGRG +DG +G
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRG
+ G G + A GRG
Subjt: ARGFDDGAKAASGGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 5.7e-50 | 80.16 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGR-GREDGPGGRPAKG
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEEAKSR DRKPP +GR R R GR+D GR KG
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGR-GREDGPGGRPAKG
Query: MARGFDDGAKAASGGRGKGGPGGKPG
+ RG DDG + GRGKGGP K G
Subjt: MARGFDDGAKAASGGRGKGGPGGKPG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.4e-48 | 79.53 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE-AKSRADRKPPVLGRGRGRGR-EDGPGGRPAK
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEE +KSR+DR+PP +GRGRGRG PGGR
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE-AKSRADRKPPVLGRGRGRGR-EDGPGGRPAK
Query: GMARGFDDGAKAASGGRGKGGPGGKPG
G+ RG DDG GGRG+GG GGK G
Subjt: GMARGFDDGAKAASGGRGKGGPGGKPG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 2.0e-34 | 62.5 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EEA +GRGRG GP + KG
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRGKGGPGGKPGANR
RG + GGRG+ GG PGA R
Subjt: ARGFDDGAKAASGGRGKGGPGGKPGANR
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.5e-47 | 77.78 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEE KSRADRKPP +GRGRGRGRE+G G R +G
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARG-FDDGAKAASGGRGKGGPGGKPG
R AKA RG+G GK G
Subjt: ARG-FDDGAKAASGGRGKGGPGGKPG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 9.4e-08 | 33.61 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGMA
VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + + + +R K LG GRGRG G+PA G
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGMA
Query: RGFDDGAKAASGGRGKGGP
RG +GGRG P
Subjt: RGFDDGAKAASGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 8.0e-07 | 33.05 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGMAR
VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD ++ R K LG GRGRG AKG R
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGMAR
Query: GFDDGAKAASGGRGKGGP
G GGRG P
Subjt: GFDDGAKAASGGRGKGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 9.4e-08 | 37.62 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV-IDKVQEEAKSRADRKPPVL-------GRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + ++ + E R K P GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV-IDKVQEEAKSRADRKPPVL-------GRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 2.0e-05 | 34.23 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV-IDKVQEEAKSRADRKPPVL-------GRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + ++ + E R K P GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV-IDKVQEEAKSRADRKPPVL-------GRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 8.7e-46 | 78.45 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPP +GRGRGRG +DG +G
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGM
Query: ARGFDDGAKAASGGRG
+ G G + A GRG
Subjt: ARGFDDGAKAASGGRG
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