CuGenDBv2

Gene ID	HG10022546
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Anaphase-promoting complex subunit 11
Genome location	Chr05:25366927..25368276
RNA-Seq Expression	HG10022546
Synteny	HG10022546
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process) GO:0045842 - positive regulation of mitotic metaphase/anaphase transition (biological process) GO:0051301 - cell division (biological process) GO:0005680 - anaphase-promoting complex (cellular component) GO:0008270 - zinc ion binding (molecular function) GO:0061630 - ubiquitin protein ligase activity (molecular function) GO:0097602 - cullin family protein binding (molecular function)
InterPro domains	IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR024991 - Anaphase-promoting complex subunit 11, RING-H2 finger

Homology

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GenBank top hits

e value

%identity

Alignment

KAF5463602.1 hypothetical protein F2P56_013763 [Juglans regia]

1.3e-18

93.18

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Query:  SHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        S  YWWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  SHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

KAG6742543.1 hypothetical protein POTOM_053415 [Populus tomentosa]

1.7e-18

83.67

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Query:  KESLYSHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        +E L  + +WWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  KESLYSHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

KGN44481.1 hypothetical protein Csa_016037 [Cucumis sativus]

2.4e-20

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Query:  NGGGLALANLKDWHIVLISYHQMGPDSPMKESLY--SHHYW-----------------------------------------------------------
        NGGGLALA LKD +I      QMGPD PMKES +    H W                                                           
Subjt:  NGGGLALANLKDWHIVLISYHQMGPDSPMKESLY--SHHYW-----------------------------------------------------------

Query:  -WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
         WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  -WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

XP_024926117.1 anaphase-promoting complex subunit 11-like isoform X1 [Ziziphus jujuba]

1.7e-18

100

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Query:  WWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        WWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  WWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

XP_035547557.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia]

1.3e-18

93.18

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Query:  SHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        S  YWWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  SHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9J6 Anaphase-promoting complex subunit 11

1.1e-20

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Query:  NGGGLALANLKDWHIVLISYHQMGPDSPMKESLY--SHHYW-----------------------------------------------------------
        NGGGLALA LKD +I      QMGPD PMKES +    H W                                                           
Subjt:  NGGGLALANLKDWHIVLISYHQMGPDSPMKESLY--SHHYW-----------------------------------------------------------

Query:  -WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
         WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  -WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

A0A1R3KV27 Anaphase-promoting complex subunit 11

1.4e-18

67.69

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Query:  HIVLISYHQMGPDSPMKESLYSHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        ++VL S     P++     L  H Y WHAVASWTW+AQDETCGICRMAFDGCC DCKLPGDDCPL
Subjt:  HIVLISYHQMGPDSPMKESLYSHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

A0A2I4HDN9 Anaphase-promoting complex subunit 11

6.2e-19

93.18

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Query:  SHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        S  YWWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  SHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

A0A540MMN6 zf-ANAPC11 domain-containing protein

1.4e-18

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Query:  SHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL--SESTSLVISSNFFS
        S H  WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPL  SE  +L +++ F S
Subjt:  SHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL--SESTSLVISSNFFS

A0A6P6FVS8 Anaphase-promoting complex subunit 11

8.2e-19

100

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Query:  WWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        WWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  WWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

SwissProt top hits

e value

%identity

Alignment

Q3ZCF6 Anaphase-promoting complex subunit 11

9.0e-15

76.92

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Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

Q5R8A2 Anaphase-promoting complex subunit 11

9.0e-15

76.92

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Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

Q9CPX9 Anaphase-promoting complex subunit 11

9.0e-15

76.92

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Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

Q9M9L0 Anaphase-promoting complex subunit 11

1.2e-19

97.44

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Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

Q9NYG5 Anaphase-promoting complex subunit 11

9.0e-15

76.92

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Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

Arabidopsis top hits

e value

%identity

Alignment

AT3G05870.1 anaphase-promoting complex/cyclosome 11

8.6e-21

97.44

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Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

AT3G05870.2 anaphase-promoting complex/cyclosome 11

8.6e-21

97.44

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Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPL
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPL

AT5G26640.1 BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2)

1.5e-12

79.41

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Query:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPLSE
        TW+AQDETCG+CRM FD  CPDCKLP DDCPLS+
Subjt:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPLSE

Sequences

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CDS sequence

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ATGAGGGATGTCCTCTTGGCTATAGAAGGATTTGAGGATGGCAGTGATCTTAAGGACATTTTTTCTAGTGACATAAATGGTGGTGGGCTTGCCCTAGCCAACCTCAAAGA
TTGGCATATAGTCCTTATCAGTTATCACCAAATGGGTCCGGATTCCCCCATGAAAGAGAGTCTATATAGCCATCATTACTGGTGGCATGCTGTTGCATCATGGACTTGGA
ATGCCCAAGACGAAACTTGTGGAATCTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGTCCATTGAGTGAGTCAACTAGCCTTGTC
ATATCCTCAAACTTTTTCTCCTGCTATCAATCATTGCAACTCACAGTTGATTCTTGA

mRNA sequence

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Protein sequence

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MRDVLLAIEGFEDGSDLKDIFSSDINGGGLALANLKDWHIVLISYHQMGPDSPMKESLYSHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLSESTSLV
ISSNFFSCYQSLQLTVDS

HG10022546 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome