; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022555 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022555
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAT-rich interactive domain-containing protein 1-like isoform X2
Genome locationChr05:25447765..25447976
RNA-Seq ExpressionHG10022555
SyntenyHG10022555
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK03023.1 AT-rich interactive domain-containing protein 1-like isoform X2 [Cucumis melo var. makuwa]4.9e-1090Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD+ESESGTAT R GNEVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
XP_008458204.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo]4.9e-1090Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD+ESESGTAT R GNEVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
XP_008458206.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X2 [Cucumis melo]4.9e-1090Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD+ESESGTAT R GNEVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
XP_022157705.1 AT-rich interactive domain-containing protein 1-like [Momordica charantia]9.2e-0985Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD ESESG ATN  G+EVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
XP_038875899.1 AT-rich interactive domain-containing protein 1-like [Benincasa hispida]3.2e-0985Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD+ES+SG ATN  GNEVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
TrEMBL top hitse value%identityAlignment
A0A0A0KD11 Uncharacterized protein1.7e-0882.5Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTP+EI+SD+ESESGTATN  GNEVHNS GS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
A0A1S3C7F8 AT-rich interactive domain-containing protein 1-like isoform X22.4e-1090Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD+ESESGTAT R GNEVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
A0A1S3C8K0 AT-rich interactive domain-containing protein 1-like isoform X12.4e-1090Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD+ESESGTAT R GNEVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
A0A5D3BTN4 AT-rich interactive domain-containing protein 1-like isoform X22.4e-1090Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD+ESESGTAT R GNEVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
A0A6J1DYZ8 AT-rich interactive domain-containing protein 1-like4.5e-0985Show/hide
Query:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
        VTPDEIDSD ESESG ATN  G+EVHNSPGS FYSPKKPR
Subjt:  VTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCATTGAGTCATGTCCTCCTAGAAGGAGGGCAGATCTTAGGATGGGTTACGCCAGATGAAATCGATAGTGACAAGGAATCAGAATCTGGAACTGCAACTAATAG
ATTAGGAAACGAAGTGCATAATTCACCTGGCTCCAATTTCTACTCTCCTAAGAAGCCACGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCATTGAGTCATGTCCTCCTAGAAGGAGGGCAGATCTTAGGATGGGTTACGCCAGATGAAATCGATAGTGACAAGGAATCAGAATCTGGAACTGCAACTAATAG
ATTAGGAAACGAAGTGCATAATTCACCTGGCTCCAATTTCTACTCTCCTAAGAAGCCACGATAA
Protein sequenceShow/hide protein sequence
MISLSHVLLEGGQILGWVTPDEIDSDKESESGTATNRLGNEVHNSPGSNFYSPKKPR