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HG10022613 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022613
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr05:26284295..26284477
RNA-Seq ExpressionHG10022613
SyntenyHG10022613
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050666.1 Plant self-incompatibility S1 [Cucumis melo var. makuwa]2.8e-0873.33Show/hide
Query:  HLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        HL VV LLV+ A+ VVQPC AVP+P P WHIHVVNG++NETLLVH
Subjt:  HLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]5.0e-1382.35Show/hide
Query:  MYEEKKHLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        MYEEK +LVVV+LLV+ AVAVVQPC AVPLPLP W IHVVNG+NNETLLVH
Subjt:  MYEEKKHLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

KAE8646232.1 hypothetical protein Csa_016625, partial [Cucumis sativus]6.3e-0873.91Show/hide
Query:  HLVVV-LLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        HL VV LL+V+ A+ VVQPCMAVP+P P WHIHVVNG++NETLLVH
Subjt:  HLVVV-LLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]6.3e-0873.91Show/hide
Query:  HLVVV-LLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        HL VV LL+V+ A+ VVQPCMAVP+P P WHIHVVNG++NETLLVH
Subjt:  HLVVV-LLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]2.8e-0873.33Show/hide
Query:  HLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        HL VV LLV+ A+ VVQPC AVP+P P WHIHVVNG++NETLLVH
Subjt:  HLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog4.0e-0864.71Show/hide
Query:  MYEEKKHLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        MYE+   L + LLLV+ AV +VQP  AVPLPLP WHIHVVNG+ N+TL VH
Subjt:  MYEEKKHLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

A0A1S3CG89 S-protein homolog1.4e-0873.33Show/hide
Query:  HLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        HL VV LLV+ A+ VVQPC AVP+P P WHIHVVNG++NETLLVH
Subjt:  HLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

A0A5A7VL75 S-protein homolog2.4e-1382.35Show/hide
Query:  MYEEKKHLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        MYEEK +LVVV+LLV+ AVAVVQPC AVPLPLP W IHVVNG+NNETLLVH
Subjt:  MYEEKKHLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

A0A5D3C8F8 Plant self-incompatibility S11.4e-0873.33Show/hide
Query:  HLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH
        HL VV LLV+ A+ VVQPC AVP+P P WHIHVVNG++NETLLVH
Subjt:  HLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAATGTATGAAGAAAAGAAGCATTTAGTAGTGGTTCTTTTACTTGTGGTGGCGGCTGTGGCAGTAGTCCAACCGTGCATGGCGGTTCCACTGCCACTCCCAAC
GTGGCACATTCATGTAGTAAATGGGATGAACAATGAAACCCTATTGGTTCATAAAATGCAATGGAAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAATGTATGAAGAAAAGAAGCATTTAGTAGTGGTTCTTTTACTTGTGGTGGCGGCTGTGGCAGTAGTCCAACCGTGCATGGCGGTTCCACTGCCACTCCCAAC
GTGGCACATTCATGTAGTAAATGGGATGAACAATGAAACCCTATTGGTTCATAAAATGCAATGGAAAGGTTAA
Protein sequenceShow/hide protein sequence
METMYEEKKHLVVVLLLVVAAVAVVQPCMAVPLPLPTWHIHVVNGMNNETLLVHKMQWKG