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HG10022619 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022619
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGamma-thionin family protein
Genome locationChr05:26329198..26330002
RNA-Seq ExpressionHG10022619
SyntenyHG10022619
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH10080.1 Gamma-thionin family protein [Prunus dulcis]1.0e-0441.56Show/hide
Query:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS
        ++ ++ N   FL   CIA LL +GP  A      CLG CSDF +CN ACI + +  GG+C G    PP  +CCC+++
Subjt:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS

CAB4291337.1 unnamed protein product [Prunus armeniaca]8.9e-0438.96Show/hide
Query:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS
        ++S++ N   FLCI  +    +AGP  A      CLG CS+F +CN ACI + +  GG+C G    PP  +CCC+++
Subjt:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS

KAG6575964.1 hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0951.85Show/hide
Query:  MASSIANRSSFLCIVCIAFLLIAG----PGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS
        MASS A RSSF  ++C+AF+LIAG    PG A      CLG CS  PNC  ACI  G+  GG C G   +PP  SCCC+S+
Subjt:  MASSIANRSSFLCIVCIAFLLIAG----PGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS

PIM97201.1 hypothetical protein CDL12_30331 [Handroanthus impetiginosus]1.8e-0442.25Show/hide
Query:  SSIANRSSFLCIVCIAFLLIAGP-GPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG-NPPSLSCCC
        +S A    F+ I+C+  +LI+G       +   C+G CSDF +CNKACI +GY  GG C G +   L+CCC
Subjt:  SSIANRSSFLCIVCIAFLLIAGP-GPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG-NPPSLSCCC

TrEMBL top hitse value%identityAlignment
A0A061DMT7 Uncharacterized protein7.3e-0440.54Show/hide
Query:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG-NPPSLSCCCDS
        +ASS+      LC+V + +  +A P  A      CLG CS  PNCN AC+ +G+  GG C G     L+CCC S
Subjt:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG-NPPSLSCCCDS

A0A2G9FW97 Uncharacterized protein8.6e-0542.25Show/hide
Query:  SSIANRSSFLCIVCIAFLLIAGP-GPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG-NPPSLSCCC
        +S A    F+ I+C+  +LI+G       +   C+G CSDF +CNKACI +GY  GG C G +   L+CCC
Subjt:  SSIANRSSFLCIVCIAFLLIAGP-GPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG-NPPSLSCCC

A0A4Y1S039 Gamma-thionin family protein5.1e-0541.56Show/hide
Query:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS
        ++ ++ N   FL   CIA LL +GP  A      CLG CSDF +CN ACI + +  GG+C G    PP  +CCC+++
Subjt:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS

A0A6J5VUM4 Uncharacterized protein4.3e-0438.96Show/hide
Query:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS
        ++S++ N   FLCI  +    +AGP  A      CLG CS+F +CN ACI + +  GG+C G    PP  +CCC+++
Subjt:  MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTG---NPPSLSCCCDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCCATTGCCAATCGATCTTCTTTCCTCTGCATTGTCTGCATTGCTTTCCTTCTCATTGCTGGACCAGGGCCAGCATGTGGGCAAAATGGGGCATGTTTGGG
AGATTGCTCAGATTTCCCAAACTGCAATAAAGCTTGCATCATTGAAGGATATGGGGCTGGTGGTTCATGCACTGGAAATCCTCCATCCCTTTCTTGCTGCTGCGACAGTT
CCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCCATTGCCAATCGATCTTCTTTCCTCTGCATTGTCTGCATTGCTTTCCTTCTCATTGCTGGACCAGGGCCAGCATGTGGGCAAAATGGGGCATGTTTGGG
AGATTGCTCAGATTTCCCAAACTGCAATAAAGCTTGCATCATTGAAGGATATGGGGCTGGTGGTTCATGCACTGGAAATCCTCCATCCCTTTCTTGCTGCTGCGACAGTT
CCTGA
Protein sequenceShow/hide protein sequence
MASSIANRSSFLCIVCIAFLLIAGPGPACGQNGACLGDCSDFPNCNKACIIEGYGAGGSCTGNPPSLSCCCDSS