; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022670 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022670
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibonuclease T(2)
Genome locationChr05:26844929..26846816
RNA-Seq ExpressionHG10022670
SyntenyHG10022670
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45018.2 hypothetical protein Csa_016393 [Cucumis sativus]1.5e-7976.92Show/hide
Query:  NLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLS
        NLG SCKI P+N FGIHGVWPSVYSKGQIGPC GPSF+P KIISLQDRM+QYW+DLENGN +EAWA KW +HGTCS   FD+FKYFCLGLDTYGRH++ S
Subjt:  NLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLS

Query:  FLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD
        FL   GL PSSSK + K SFI AIAN T  KGGVIC  DQ  R QLQKAVLCY KDG TLIDCPDNVSSSCPD+F WLALGD
Subjt:  FLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD

XP_004149779.2 ribonuclease MC [Cucumis sativus]1.5e-7976.92Show/hide
Query:  NLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLS
        NLG SCKI P+N FGIHGVWPSVYSKGQIGPC GPSF+P KIISLQDRM+QYW+DLENGN +EAWA KW +HGTCS   FD+FKYFCLGLDTYGRH++ S
Subjt:  NLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLS

Query:  FLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD
        FL   GL PSSSK + K SFI AIAN T  KGGVIC  DQ  R QLQKAVLCY KDG TLIDCPDNVSSSCPD+F WLALGD
Subjt:  FLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD

XP_022143591.1 ribonuclease 1-like [Momordica charantia]1.8e-5677.61Show/hide
Query:  MSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQK
        M +YWQDL +G+   AW  KWAIHGTCS TVFDEFKYFC+GLDTYGRH++LSFLVHGGLVPSS++   KTSFIKAIA++TS KGGVIC ADQRGRTQL+ 
Subjt:  MSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQK

Query:  AVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD
         VLCY KDGAT+IDCPDNVSSSCPD F WLALGD
Subjt:  AVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD

XP_022159333.1 ribonuclease MC-like [Momordica charantia]1.1e-2636.21Show/hide
Query:  CKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRH--SMLSFLV
        C   P+NRF IHGVWPS  S  ++GPC+G +F+P  I+S++  ++Q W D+        W+ +W  HGTCS  + ++ +YF  GL+ Y      ++  L 
Subjt:  CKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRH--SMLSFLV

Query:  HGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFW
           ++P + K   K    KAI+++   + G  C  DQ    QL +   CY KD +TL DCP N +++CP  F W
Subjt:  HGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFW

XP_038899255.1 ribonuclease MC-like [Benincasa hispida]9.5e-9589.01Show/hide
Query:  NLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLS
        NLGKSCKI PEN FGIHGVWPSVYSKGQIGPCSGPSF+P KI+SLQDRMSQYWQDLENGNP+EAWA KWAIHGTCS TVFDEFKYFCLGLDTYGRH+MLS
Subjt:  NLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLS

Query:  FLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD
        FLVHGGLVPSSSK L KTSF+KAIA+MTS KGGVIC  DQRGRTQLQKAVLCY KDG TLIDCPDNVSSSCPD+F WLALGD
Subjt:  FLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD

TrEMBL top hitse value%identityAlignment
A0A0A0K4L1 Uncharacterized protein3.7e-5273.88Show/hide
Query:  MSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQK
        M+QYW+DLENGN +EAWA KW +HGTCS   FD+FKYFCLGLDTYGRH++ SFL   GL PSSSK + K SFI AIAN T  KGGVIC  DQ  R QLQK
Subjt:  MSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQK

Query:  AVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD
        AVLCY KDG TLIDCPDNVSSSCPD+F WLALGD
Subjt:  AVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD

A0A0A0LAN6 Ribonuclease T(2)2.7e-2637.57Show/hide
Query:  CKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVHG
        C   P+ +F IHG+WPS +S   +   S   ++  K+ISL+ +++  W DL+ GN  + W  +W  HG CS   F  F+YF + L+   +  +L+ L   
Subjt:  CKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVHG

Query:  GLVPSSSKNLPKTSFIKAIANMTSTKGGVICTAD-QRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFW
        GL P +S+NL   + +  I   T    G+ C  + + G++QL + VLC  KDGATLIDCP  VS++C  SF W
Subjt:  GLVPSSSKNLPKTSFIKAIANMTSTKGGVICTAD-QRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFW

A0A6J1CQQ9 ribonuclease 1-like8.5e-5777.61Show/hide
Query:  MSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQK
        M +YWQDL +G+   AW  KWAIHGTCS TVFDEFKYFC+GLDTYGRH++LSFLVHGGLVPSS++   KTSFIKAIA++TS KGGVIC ADQRGRTQL+ 
Subjt:  MSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQK

Query:  AVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD
         VLCY KDGAT+IDCPDNVSSSCPD F WLALGD
Subjt:  AVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD

A0A6J1DYI5 ribonuclease MC-like5.4e-2736.21Show/hide
Query:  CKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRH--SMLSFLV
        C   P+NRF IHGVWPS  S  ++GPC+G +F+P  I+S++  ++Q W D+        W+ +W  HGTCS  + ++ +YF  GL+ Y      ++  L 
Subjt:  CKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRH--SMLSFLV

Query:  HGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFW
           ++P + K   K    KAI+++   + G  C  DQ    QL +   CY KD +TL DCP N +++CP  F W
Subjt:  HGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFW

A0A6J1EXD5 Ribonuclease T(2)5.0e-2535.75Show/hide
Query:  GKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYF--CLGLDTYGRHSMLS
        G  C   P   F IHG+WPS YS   +  C+G  FNP +I +L  +++ YW D+ +GN    W  +W  HGTCS   F++ +YF   L + T   + +L+
Subjt:  GKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYF--CLGLDTYGRHSMLS

Query:  FLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTAD-QRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWL
         L   GL P+++      +   AI   T  K G+ C  + Q  + QL + +LC+ K+G TLIDC      +CP  F WL
Subjt:  FLVHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTAD-QRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWL

SwissProt top hitse value%identityAlignment
O80325 Ribonuclease S-73.7e-0924.07Show/hide
Query:  CKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQD-LENGNPMEAWAMKWAIHGTCSV-TVFDEFKYFCLGLDTY-GRHSMLSFL
        CK  P+  F +HG+WPS  +      C+  + NP +I ++Q ++   W + L+  N +  W  +W  HG+C    + ++  YF   ++ Y  +   +S +
Subjt:  CKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQD-LENGNPMEAWAMKWAIHGTCSV-TVFDEFKYFCLGLDTY-GRHSMLSFL

Query:  VHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCP
        +    +       P      AI N T+ K          G T+L +  LC         +CP
Subjt:  VHGGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCP

P23540 Ribonuclease MC5.4e-1628.99Show/hide
Query:  FNLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSML
        F    SC  +    F IHG+WP            G  F+  KI  LQ +++  W ++   N  + W+ +W  HGTCS + F++  YF L +D    + ++
Subjt:  FNLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSML

Query:  SFLVHGGLVPSSSKNLPKTSFIKAIANMTSTK----GGVICTADQRGR-TQLQKAVLCYGKDGATLIDC
             G L P ++    +T   +AI      K     G+ C  D + + + L + V C+ +DG+TLIDC
Subjt:  SFLVHGGLVPSSSKNLPKTSFIKAIANMTSTK----GGVICTADQRGR-TQLQKAVLCYGKDGATLIDC

Q7M438 Ribonuclease DdI3.7e-1731.29Show/hide
Query:  FGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVT--VFDEFKYFCLGLDTYGRHSMLSFLVHGGLVPSS
        F IHG+WP          CSGPSFN   I  L+D+++  W  L   N  + W  +++ HGTCS+T  + D   YF  G+  Y   ++ + L    + PS 
Subjt:  FGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVT--VFDEFKYFCLGLDTYGRHSMLSFLVHGGLVPSS

Query:  SKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDS
        S          AI      K G+ C++      QL    +C  K+  +++DCPD    SC  S
Subjt:  SKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCGATTATGTTCAACCTTGGAAAGAGCTGCAAAATAGCACCGGAGAATAGGTTTGGTATTCATGGTGTATGGCCTAGCGTCTACTCCAAAGGCCAAATTGGACC
TTGCTCGGGCCCTTCTTTTAACCCCTTCAAAATCATCTCATTGCAAGACCGGATGAGCCAATACTGGCAAGACCTGGAGAACGGGAACCCGATGGAAGCGTGGGCGATGA
AGTGGGCAATCCACGGGACTTGCTCGGTGACCGTGTTTGATGAGTTCAAGTATTTCTGCTTGGGTTTGGACACCTACGGCCGCCATTCTATGTTGTCATTTTTAGTCCAT
GGAGGTTTGGTTCCTAGCTCTAGCAAGAATCTACCCAAGACTAGCTTTATCAAAGCCATCGCCAACATGACCTCGACGAAGGGCGGTGTTATCTGCACCGCTGATCAACG
TGGCCGGACTCAACTCCAGAAGGCGGTTTTATGCTATGGCAAAGATGGTGCTACTCTCATCGATTGCCCAGATAATGTTAGTAGTTCTTGCCCTGATTCCTTCTTCTGGC
TTGCCTTGGGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCGATTATGTTCAACCTTGGAAAGAGCTGCAAAATAGCACCGGAGAATAGGTTTGGTATTCATGGTGTATGGCCTAGCGTCTACTCCAAAGGCCAAATTGGACC
TTGCTCGGGCCCTTCTTTTAACCCCTTCAAAATCATCTCATTGCAAGACCGGATGAGCCAATACTGGCAAGACCTGGAGAACGGGAACCCGATGGAAGCGTGGGCGATGA
AGTGGGCAATCCACGGGACTTGCTCGGTGACCGTGTTTGATGAGTTCAAGTATTTCTGCTTGGGTTTGGACACCTACGGCCGCCATTCTATGTTGTCATTTTTAGTCCAT
GGAGGTTTGGTTCCTAGCTCTAGCAAGAATCTACCCAAGACTAGCTTTATCAAAGCCATCGCCAACATGACCTCGACGAAGGGCGGTGTTATCTGCACCGCTGATCAACG
TGGCCGGACTCAACTCCAGAAGGCGGTTTTATGCTATGGCAAAGATGGTGCTACTCTCATCGATTGCCCAGATAATGTTAGTAGTTCTTGCCCTGATTCCTTCTTCTGGC
TTGCCTTGGGTGATTGA
Protein sequenceShow/hide protein sequence
MLSIMFNLGKSCKIAPENRFGIHGVWPSVYSKGQIGPCSGPSFNPFKIISLQDRMSQYWQDLENGNPMEAWAMKWAIHGTCSVTVFDEFKYFCLGLDTYGRHSMLSFLVH
GGLVPSSSKNLPKTSFIKAIANMTSTKGGVICTADQRGRTQLQKAVLCYGKDGATLIDCPDNVSSSCPDSFFWLALGD