CuGenDBv2

Gene ID	HG10022676
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Genomic DNA, chromosome 3, P1 clone: MJL12
Genome location	Chr05:26878426..26878824
RNA-Seq Expression	HG10022676
Synteny	HG10022676
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593013.1 hypothetical protein SDJN03_12489, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-29

69.84

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Query:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS
        KSFL GCK  E DE++MDLLWEKYEEK+             +  + KKDLRSLVN QKE+EEEEEEEEEEE E   GKICCLQALK ST KMR GMGKKS
Subjt:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS

Query:  GLRKISKAFKGLKLLHQLTTNGKNKT
        GL+KISKAFKGLKLLHQL T  KNKT
Subjt:  GLRKISKAFKGLKLLHQLTTNGKNKT

KAG7025422.1 hypothetical protein SDJN02_11917, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-31

70.63

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Query:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS
        KSFL GCK  E DE++MDLLWEKYEEK+             +  + KKDLRSLVN QKE+EEEEEEEEEEEEE   GKICCLQALK ST KMR GMGKKS
Subjt:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS

Query:  GLRKISKAFKGLKLLHQLTTNGKNKT
        GL+KISKAFKGLKLLHQL T  KNKT
Subjt:  GLRKISKAFKGLKLLHQLTTNGKNKT

XP_016902223.1 PREDICTED: uncharacterized protein LOC107991592 [Cucumis melo]

7.7e-43

81.67

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Query:  KSFLGCKVIEDEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGL
        KS + CKV EDEEKMDLLWEKYE++E+VVV+EEE+N  NRCISKKKDLRSLVNQQKE+EE EEEEEEEE    NGKICCLQALKFS+SKMR GMGKK+GL
Subjt:  KSFLGCKVIEDEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGL

Query:  RKISKAFKGLKLLHQLTTNG
        +KISKAFKGLK LHQLTTNG
Subjt:  RKISKAFKGLKLLHQLTTNG

XP_023004158.1 uncharacterized protein LOC111497570 [Cucurbita maxima]

1.9e-28

67.46

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Query:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS
        KSFL GCK  E DE+KMDLLWEKYEEK+             +  + KKDLRSLVN QKE+EEEEEEEEE       GKICCLQALK ST KMR GMGKKS
Subjt:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS

Query:  GLRKISKAFKGLKLLHQLTTNGKNKT
        GL+KISKAFKG KLLHQL T  KNKT
Subjt:  GLRKISKAFKGLKLLHQLTTNGKNKT

XP_023513792.1 uncharacterized protein LOC111778295 [Cucurbita pepo subsp. pepo]

6.8e-31

71.43

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Query:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS
        KSFL GCK  E DE+KMDLLWEKYEEK+             +  + KKDLRSLVN QKE+EEEEEEEEEEEEE   GKICCLQALK ST KMR GMGKKS
Subjt:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS

Query:  GLRKISKAFKGLKLLHQLTTNGKNKT
        GL+KISKAFKGLKLLHQL T  KNKT
Subjt:  GLRKISKAFKGLKLLHQLTTNGKNKT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4L5 Genomic DNA, chromosome 3, P1 clone: MJL12

5.6e-47

82.54

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Query:  KSFLGCKVIEDEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGL
        KS + CKV EDEEKMDLLWEKYE+KE+VVV++EE+N  NRCISKKKDLRSLVNQQKE+EE E++EEEEEE   NGKICCLQALKFSTSKMR GMGKK+GL
Subjt:  KSFLGCKVIEDEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGL

Query:  RKISKAFKGLKLLHQLTTNGKNKTHS
        +KISKAFKGLK LHQLTTNGKNKTHS
Subjt:  RKISKAFKGLKLLHQLTTNGKNKTHS

A0A1S4E1X2 uncharacterized protein LOC107991592

3.8e-43

81.67

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Query:  KSFLGCKVIEDEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGL
        KS + CKV EDEEKMDLLWEKYE++E+VVV+EEE+N  NRCISKKKDLRSLVNQQKE+EE EEEEEEEE    NGKICCLQALKFS+SKMR GMGKK+GL
Subjt:  KSFLGCKVIEDEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGL

Query:  RKISKAFKGLKLLHQLTTNG
        +KISKAFKGLK LHQLTTNG
Subjt:  RKISKAFKGLKLLHQLTTNG

A0A6J1DVV3 uncharacterized protein LOC111023976

1.4e-21

60.68

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Query:  EEKMDLLWEKYEEKE--MVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGLRKISKAFKG
        +++MDLLWE YE KE  M  +V++    ++   SKKKDLRSLVN      E+E EE EE EE+  GKICCLQALKFST KMRLG+GK+SGL KISKAFKG
Subjt:  EEKMDLLWEKYEEKE--MVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGLRKISKAFKG

Query:  LKLLHQLTTNGKNKTHS
        LK LH L  +GK   HS
Subjt:  LKLLHQLTTNGKNKTHS

A0A6J1H9Q5 uncharacterized protein LOC111460896 isoform X1

2.0e-28

67.46

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Query:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS
        KSFL GCK  E DE++MDLLWEKYEEK+             +  + KKDLRSLVN QKE+EEEEEEEEE E     GKICCLQALK ST KMR GMGKKS
Subjt:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS

Query:  GLRKISKAFKGLKLLHQLTTNGKNKT
        GL+KISKAFKGLKLLH L T  KNKT
Subjt:  GLRKISKAFKGLKLLHQLTTNGKNKT

A0A6J1KYN7 uncharacterized protein LOC111497570

9.0e-29

67.46

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Query:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS
        KSFL GCK  E DE+KMDLLWEKYEEK+             +  + KKDLRSLVN QKE+EEEEEEEEE       GKICCLQALK ST KMR GMGKKS
Subjt:  KSFL-GCKVIE-DEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKS

Query:  GLRKISKAFKGLKLLHQLTTNGKNKT
        GL+KISKAFKG KLLHQL T  KNKT
Subjt:  GLRKISKAFKGLKLLHQLTTNGKNKT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G25130.1 unknown protein

6.6e-08

36.29

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Query:  LGCKVIEDE------EKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKK
        L CK+ E+       + MD LWE YE +      E++          KK  +S++ + K IE+E   EEE+++   + ++CCLQALKFST KM LG+ + 
Subjt:  LGCKVIEDE------EKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKK

Query:  SGLRKISKAFKGLKLLHQLTTNGK
        + L K+SKAFKG+   +    + K
Subjt:  SGLRKISKAFKGLKLLHQLTTNGK

Sequences

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CDS sequence

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ATGGGAATAAATTACAATAAGAGCTTTTTGGGATGCAAAGTAATTGAAGATGAAGAGAAAATGGATTTGCTTTGGGAAAAGTATGAGGAAAAGGAAATGGTAGTAGTTGT
TGAAGAAGAGATCAATAACAACAACAGATGCATTTCAAAGAAGAAGGATTTGAGGAGTTTGGTGAATCAGCAAAAGGAAATTGAGGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAAAAGCAAATGGGAAGATTTGTTGCTTACAAGCATTGAAATTTTCCACTTCAAAAATGAGATTAGGAATGGGAAAGAAAAGTGGTTTGAGGAAGATTTCT
AAAGCTTTCAAAGGCCTTAAATTGTTGCATCAACTCACTACTAATGGTAAGAACAAGACACATTCTTGA

mRNA sequence

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Protein sequence

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MGINYNKSFLGCKVIEDEEKMDLLWEKYEEKEMVVVVEEEINNNNRCISKKKDLRSLVNQQKEIEEEEEEEEEEEEEKANGKICCLQALKFSTSKMRLGMGKKSGLRKIS
KAFKGLKLLHQLTTNGKNKTHS

HG10022676 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome