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HG10022834 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022834
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionElongation factor
Genome locationChr05:28781215..28782808
RNA-Seq ExpressionHG10022834
SyntenyHG10022834
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY40670.1 hypothetical protein CUMW_053760 [Citrus unshiu]1.0e-1677.78Show/hide
Query:  GWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVES
        GW  SL++SP KKLWDRLHS H   R+G+YILYKDVKSCPCEDVQ+LWSILVES
Subjt:  GWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVES

KAG6575915.1 hypothetical protein SDJN03_26554, partial [Cucurbita argyrosperma subsp. sororia]8.0e-1751Show/hide
Query:  MGWFRSLLISPFKKLWDRLHSPHTSNR-----------------------------------KGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSPSSP
        MGWFRSLL+SP KKLW RLHSPH +                                     KGIYILYKDVKSCPCEDVQMLWSILVE+ S  + P SP
Subjt:  MGWFRSLLISPFKKLWDRLHSPHTSNR-----------------------------------KGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSPSSP

KDO68697.1 hypothetical protein CISIN_1g035399mg [Citrus sinensis]1.0e-1677.78Show/hide
Query:  GWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVES
        GW  SL++SP KKLWDRLHS H   R+G+YILYKDVKSCPCEDVQ+LWSILVES
Subjt:  GWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVES

KGN44804.1 hypothetical protein Csa_015628 [Cucumis sativus]7.2e-2690.32Show/hide
Query:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSP
        MGWF+S LISPFKKLWDRLHSPH SNRKGIYILYKDVKSCPCEDVQMLWSILV+S+S PNSP
Subjt:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSP

RXI05532.1 hypothetical protein DVH24_017574 [Malus domestica]1.6e-1772.31Show/hide
Query:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSPSSP
        MGW RS L+SP KKLWDRLHS H   RKGIYILYKDV+SCPCEDV +LWSILV+S S P  P+ P
Subjt:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSPSSP

TrEMBL top hitse value%identityAlignment
A0A067FZ56 Uncharacterized protein5.1e-1777.78Show/hide
Query:  GWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVES
        GW  SL++SP KKLWDRLHS H   R+G+YILYKDVKSCPCEDVQ+LWSILVES
Subjt:  GWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVES

A0A0A0K7C3 Uncharacterized protein3.5e-2690.32Show/hide
Query:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSP
        MGWF+S LISPFKKLWDRLHSPH SNRKGIYILYKDVKSCPCEDVQMLWSILV+S+S PNSP
Subjt:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSP

A0A2H5NKH5 Uncharacterized protein5.1e-1777.78Show/hide
Query:  GWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVES
        GW  SL++SP KKLWDRLHS H   R+G+YILYKDVKSCPCEDVQ+LWSILVES
Subjt:  GWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVES

A0A498KIY5 Uncharacterized protein7.8e-1872.31Show/hide
Query:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSPSSP
        MGW RS L+SP KKLWDRLHS H   RKGIYILYKDV+SCPCEDV +LWSILV+S S P  P+ P
Subjt:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSPSSP

K7MYL2 Uncharacterized protein6.6e-1775.41Show/hide
Query:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNS
        MGWF+SLL  P KKLWDRLHS H   R+GIYILYKDVKSCPCEDV +LWSILVES + P S
Subjt:  MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGTTCAGATCCCTCCTCATTTCACCATTCAAGAAGCTTTGGGATCGTCTTCACTCCCCACATACATCAAATCGGAAAGGGATCTACATTTTGTATAAAGATGT
GAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTCGAGTCCAGTTCCCTTCCTAATTCGCCATCGTCGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATGGTTCAGATCCCTCCTCATTTCACCATTCAAGAAGCTTTGGGATCGTCTTCACTCCCCACATACATCAAATCGGAAAGGGATCTACATTTTGTATAAAGATGT
GAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTCGAGTCCAGTTCCCTTCCTAATTCGCCATCGTCGCCGTGA
Protein sequenceShow/hide protein sequence
MGWFRSLLISPFKKLWDRLHSPHTSNRKGIYILYKDVKSCPCEDVQMLWSILVESSSLPNSPSSP