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HG10022869 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022869
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSignal peptidase complex subunit 1
Genome locationChr05:29118900..29119181
RNA-Seq ExpressionHG10022869
SyntenyHG10022869
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006465 - signal peptide processing (biological process)
GO:0045047 - protein targeting to ER (biological process)
GO:0005787 - signal peptidase complex (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR009542 - Signal peptidase complex subunit Spc1/SPCS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51679.1 hypothetical protein Csa_009252 [Cucumis sativus]5.8e-3786.02Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFNRHPL WLDP + +KYPKPQPQEPVVLKKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

XP_004135313.1 probable signal peptidase complex subunit 1 [Cucumis sativus]5.8e-3786.02Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFNRHPL WLDP + +KYPKPQPQEPVVLKKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

XP_008446045.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo]7.6e-3787.1Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFNRHPL WLDP + +KYPKPQPQEPVV KKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

XP_023549840.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]4.2e-3583.87Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFNRHPL WLDP V +KYPKPQPQEPVVLKKKP KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

XP_038882954.1 probable signal peptidase complex subunit 1 [Benincasa hispida]1.1e-3584.95Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQIMLVAFAVV F TGY+MGSF+MMILVYA  V LTTLITVPNWPFFNRHPL WLDP + +KYPKPQPQEPVVLKKK AKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

TrEMBL top hitse value%identityAlignment
A0A0A0KS09 Uncharacterized protein2.8e-3786.02Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQ+MLVAFAVV F TGYVMGSF++MILVYA  VFLTTLITVPNWPFFNRHPL WLDP + +KYPKPQPQEPVVLKKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

A0A1S3BET6 probable signal peptidase complex subunit 13.7e-3787.1Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFNRHPL WLDP + +KYPKPQPQEPVV KKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

A0A5D3CZV6 Putative signal peptidase complex subunit 13.7e-3787.1Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQIMLVAFAVV F TGYVMGSF+MMILVYA  VFLTTLITVPNWPFFNRHPL WLDP + +KYPKPQPQEPVV KKKPAKK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

A0A6J1GX63 probable signal peptidase complex subunit 15.9e-3582.8Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFNRHPL WLDP V +KYPKPQPQEPV LKKKP KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

A0A6J1KDF1 probable signal peptidase complex subunit 12.0e-3583.87Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQ+MQIMLVAFAVV F TGYVM SF+MM+LVYA  V LTTLITVPNWPFFNRHPL WLDP V +KYPKPQPQEPVVLKKKP KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

SwissProt top hitse value%identityAlignment
B0FWK4 Signal peptidase complex subunit 18.3e-1043.04Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL---DPCVVDKYP
        MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP + RHPL WL   D    DK P
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL---DPCVVDKYP

Q3T134 Signal peptidase complex subunit 11.1e-0941.77Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL---DPCVVDKYP
        MD+ GQKLAEQ+ Q +++  A+VGF  GY+   F   + +  A    + L+T+P WP + RHPL WL   D    DK P
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL---DPCVVDKYP

Q944J0 Probable signal peptidase complex subunit 12.5e-2259.14Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N HPL WLDP   +K+PKP+    V  KKK +KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

Q9D958 Signal peptidase complex subunit 11.1e-0944.78Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL
        MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP + RHPL WL
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL

Q9Y6A9 Signal peptidase complex subunit 11.1e-0944.78Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL
        MD+ GQKLAEQ+ Q +++  A+VGF  GYV   F   + +  A    + L+T+P WP + RHPL WL
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWL

Arabidopsis top hitse value%identityAlignment
AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12)1.8e-2359.14Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N HPL WLDP   +K+PKP+    V  KKK +KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12)1.8e-2359.14Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKL EQLMQI+LV   VV    GY   SF+ M+L+YA  V LTTL+TVPNWPF+N HPL WLDP   +K+PKP+    V  KKK +KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK

AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12)5.5e-2561.29Show/hide
Query:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK
        MDW GQKLAEQLMQI+L+  AVV F  GY   SF+MM+L+YA  V LTTLIT+PNWP FNRH L WLDP   +K+PKPQ       KK  +KK
Subjt:  MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTGGCTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAGATTATGTTGGTTGCATTTGCCGTTGTGGGCTTTTCGACTGGCTATGTTATGGGATCATTTCAAATGAT
GATCTTGGTTTACGCTGCTGCTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAATTGGTTGGATCCTTGTGTGGTTGATA
AATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTGGCTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAGATTATGTTGGTTGCATTTGCCGTTGTGGGCTTTTCGACTGGCTATGTTATGGGATCATTTCAAATGAT
GATCTTGGTTTACGCTGCTGCTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAATTGGTTGGATCCTTGTGTGGTTGATA
AATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAG
Protein sequenceShow/hide protein sequence
MDWLGQKLAEQLMQIMLVAFAVVGFSTGYVMGSFQMMILVYAAAVFLTTLITVPNWPFFNRHPLNWLDPCVVDKYPKPQPQEPVVLKKKPAKK