; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022896 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022896
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA-binding protein BRN1
Genome locationChr05:29407575..29412207
RNA-Seq ExpressionHG10022896
SyntenyHG10022896
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR002343 - Paraneoplastic encephalomyelitis antigen
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057544.1 RNA-binding protein BRN1 [Cucumis melo var. makuwa]9.3e-22989.85Show/hide
Query:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRG-----------------CCFVICPSRQEADKAVNAC
        MAEGSR GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRG                 CCFVICPSRQEADKAVNAC
Subjt:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRG-----------------CCFVICPSRQEADKAVNAC

Query:  HNKKTLPGASSPLQVKYADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEA
        HNKKTLPGASSPLQVKYADGELERL             AEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEA
Subjt:  HNKKTLPGASSPLQVKYADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEA

Query:  INGKCKMEGSSVPLVVKWADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG
        INGKCKMEGSSVPLVVKWADTEKERQARK QKAQSQA+NVLNADSQHPSLFGAM PLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG
Subjt:  INGKCKMEGSSVPLVVKWADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG

Query:  SAMRGIPPDLGPGMATRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFG
        +AMRGIPPDLGPGMATRNY MPPASY   AYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFT GK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFG
Subjt:  SAMRGIPPDLGPGMATRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFG

Query:  DLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        D ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  DLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

XP_004148884.1 RNA-binding protein BRN1 [Cucumis sativus]1.3e-23092.76Show/hide
Query:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSR GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK
        ADGELERL              EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK
Subjt:  ADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK

Query:  WADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATR
        WADTEKERQARK QKAQSQA+NVLNADSQHPSLFGAM PLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG+AMRGIPPDLGPGMATR
Subjt:  WADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATR

Query:  NYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSA
        NY MPPASY   AYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFT GK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSA
Subjt:  NYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSA

Query:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        KVFVDKTSGVSKCFGFVSYDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

XP_008451423.1 PREDICTED: RNA-binding protein BRN1 [Cucumis melo]2.6e-23192.98Show/hide
Query:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSR GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK
        ADGELERL              EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK
Subjt:  ADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK

Query:  WADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATR
        WADTEKERQARK QKAQSQA+NVLNADSQHPSLFGAM PLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG+AMRGIPPDLGPGMATR
Subjt:  WADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATR

Query:  NYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSA
        NY MPPASY   AYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFT GK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSA
Subjt:  NYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSA

Query:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

XP_022953846.1 RNA-binding protein BRN1-like [Cucurbita moschata]5.4e-22991.87Show/hide
Query:  MAEGS-RGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA
        MAEGS  GERK SSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYA
Subjt:  MAEGS-RGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA

Query:  DGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW
        DGELERL              EHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKW
Subjt:  DGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW

Query:  ADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRN
        ADTEKERQARK QKAQSQASNVLNADSQ  SLFGA+ PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG+AMRGIPPDLGPGMATRN
Subjt:  ADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRN

Query:  YGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAK
        YGMPPASYVG AYP VPGLQHPMAYPGGMMSPGVVSSS  PGPFT G NNSPTSSLGKGSG QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAK
Subjt:  YGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAK

Query:  VFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        VFVDKTSGVSKCFGFVSYDS EAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  VFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

XP_038900154.1 RNA-binding protein BRN1 [Benincasa hispida]4.2e-23793.83Show/hide
Query:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAEGSRGERKES+QEEEDSVKLFVGQVPK MTEAQLLAMFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
Subjt:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA
        GELERL              EHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA
Subjt:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA

Query:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRNY
        DTEKERQARK QKAQSQASNVLNADSQHPSLFGAM PLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSG+PNMIPQLNQG+AMRGIPPDLGPGMATRNY
Subjt:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRNY

Query:  GMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKV
        GMPPA+YV  AYPGVPGLQHPMAY GGMMSPGVVSSSPGPGPFT GKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKV
Subjt:  GMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKV

Query:  FVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        FVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  FVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

TrEMBL top hitse value%identityAlignment
A0A0A0K5R5 Uncharacterized protein6.3e-23192.76Show/hide
Query:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSR GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK
        ADGELERL              EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK
Subjt:  ADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK

Query:  WADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATR
        WADTEKERQARK QKAQSQA+NVLNADSQHPSLFGAM PLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG+AMRGIPPDLGPGMATR
Subjt:  WADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATR

Query:  NYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSA
        NY MPPASY   AYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFT GK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSA
Subjt:  NYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSA

Query:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        KVFVDKTSGVSKCFGFVSYDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

A0A1S3BRF9 RNA-binding protein BRN11.3e-23192.98Show/hide
Query:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSR GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK
        ADGELERL              EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK
Subjt:  ADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK

Query:  WADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATR
        WADTEKERQARK QKAQSQA+NVLNADSQHPSLFGAM PLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG+AMRGIPPDLGPGMATR
Subjt:  WADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATR

Query:  NYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSA
        NY MPPASY   AYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFT GK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSA
Subjt:  NYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSA

Query:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

A0A5A7UR22 RNA-binding protein BRN14.5e-22989.85Show/hide
Query:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRG-----------------CCFVICPSRQEADKAVNAC
        MAEGSR GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRG                 CCFVICPSRQEADKAVNAC
Subjt:  MAEGSR-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRG-----------------CCFVICPSRQEADKAVNAC

Query:  HNKKTLPGASSPLQVKYADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEA
        HNKKTLPGASSPLQVKYADGELERL             AEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEA
Subjt:  HNKKTLPGASSPLQVKYADGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEA

Query:  INGKCKMEGSSVPLVVKWADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG
        INGKCKMEGSSVPLVVKWADTEKERQARK QKAQSQA+NVLNADSQHPSLFGAM PLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG
Subjt:  INGKCKMEGSSVPLVVKWADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG

Query:  SAMRGIPPDLGPGMATRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFG
        +AMRGIPPDLGPGMATRNY MPPASY   AYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFT GK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFG
Subjt:  SAMRGIPPDLGPGMATRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFG

Query:  DLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        D ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  DLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

A0A6J1DAN8 RNA-binding protein BRN11.2e-22690.31Show/hide
Query:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAEG R   + +SQEEEDSVKLFVGQVPKHM+E QLLAMFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
Subjt:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA
        GELERL              EHKLFIGMLPKNVSED+VSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK KMEGSSVPLVVKWA
Subjt:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA

Query:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRNY
        DTEKERQARK QKAQSQ SNVLNADSQHPSLFGAM PLGYVPPYNG+GYQAPGSYGLMQYHLPP+QNQSGF NMIPQLNQG+AMRGIPPDLGPGMA RNY
Subjt:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRNY

Query:  GMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKV
        GMPPASYVG AYPGVPGLQHPMAYPGGMMSPGVVSSSPG G  T GK+NSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRA+GRVLSAKV
Subjt:  GMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKV

Query:  FVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        FVDKTSGVSKCFGFVSYDS EAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  FVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

A0A6J1GP82 RNA-binding protein BRN1-like2.6e-22991.87Show/hide
Query:  MAEGS-RGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA
        MAEGS  GERK SSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYA
Subjt:  MAEGS-RGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA

Query:  DGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW
        DGELERL              EHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKW
Subjt:  DGELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW

Query:  ADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRN
        ADTEKERQARK QKAQSQASNVLNADSQ  SLFGA+ PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG+AMRGIPPDLGPGMATRN
Subjt:  ADTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRN

Query:  YGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAK
        YGMPPASYVG AYP VPGLQHPMAYPGGMMSPGVVSSS  PGPFT G NNSPTSSLGKGSG QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAK
Subjt:  YGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAK

Query:  VFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        VFVDKTSGVSKCFGFVSYDS EAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  VFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

SwissProt top hitse value%identityAlignment
A0JM51 CUGBP Elav-like family member 53.8e-6835.68Show/hide
Query:  RKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVC
        ++  S ++ D++KLFVGQ+P+++ E  L  +F++F  + E+ +++D+ T   +GC F+   +R  A KA  A H +KTLPG + P+QVK AD E      
Subjt:  RKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVC

Query:  MDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQA
          S G       + KLF+GML K  SE+EV+ +F  +G+I++  +LRG   +SKGCAF+K+ +  +A AA++A++G   M G+S  LVVK+ADT+KER  
Subjt:  MDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQA

Query:  RKVQK--------------------------AQSQASNVLNADSQHPSLFGAMPP--LGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
        R++Q+                           Q Q + +  +   + S   A P   +  +   N  G  A         H PP+   +  P ++  L  
Subjt:  RKVQK--------------------------AQSQASNVLNADSQHPSLFGAMPP--LGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ

Query:  GSAMRGIPPDLGPGMAT--RNYGMP-----PASYVGPAYPGVPGLQHPMA-YPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLF
        G       P   P + T   N  +P     PA  V   +P   G+Q   A YP   ++P V  S+P P P                   Q EGP G NLF
Subjt:  GSAMRGIPPDLGPGMAT--RNYGMP-----PASYVGPAYPGVPGLQHPMA-YPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLF

Query:  IYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        IYH+PQEFGD EL   F  FG ++S+KVF+D+ +  SKCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Subjt:  IYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

Q08E07 CUGBP Elav-like family member 31.2e-6635.32Show/hide
Query:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMDSNGW
        +E D++KLFVGQ+P+H+ E  L  +F++F  + E+ +I+DK T   +GC F+   +R  A KA +A H +KTLPG + P+QVK AD E        S G 
Subjt:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMDSNGW

Query:  LFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKVQKA
              + KLF+GML K  ++++V  +F  +GTI +  +LRG   TSKGCAF+K++T  +A AA+  ++    + G+S  LVVK+ADTEKER  R++Q+ 
Subjt:  LFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKVQKA

Query:  QSQ--------------ASNVLNADSQHPSLFGA----MPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPG--
         +Q              ++       Q  +L  A    + P+  +         A  + GL+   + P    S      P     + +  IP  LG    
Subjt:  QSQ--------------ASNVLNADSQHPSLFGA----MPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPG--

Query:  --MATRNYGMP-----------------PASYVGPAYPGVPGLQHPMAYPGGM--------MSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPP
          + T+  G P                 PA+ V P      G+QH  AYP             P +V+  P P P    +              Q EGP 
Subjt:  --MATRNYGMP-----------------PASYVGPAYPGVPGLQHPMAYPGGM--------MSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPP

Query:  GANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        G N+FIYH+PQEF D E+   F  FG V+SAKVFVD+ +  SKCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Subjt:  GANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

Q6P0B1 CUGBP Elav-like family member 24.2e-6735.8Show/hide
Query:  GERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE
        G  + S Q + D++K+FVGQ+P+  +E +L  +F+ +  V ++NI+RD++     S+GCCFV   +R+ A +A NA HN KTL G   P+Q+K AD E  
Subjt:  GERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE

Query:  RLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEK
          V             + KLFIGM+ K  +E+++  +FS YG I++ +ILRG    S+GCAF+ + T+  A  A++A++    MEG S P+VVK+ADT+K
Subjt:  RLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEK

Query:  ERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQY---------HLPPMQN------------QSGFPNMIPQLNQGSA
        +++ R++Q+  +Q    LN+ S   SL G     G  P Y     QA  S  L  +         +   +QN             S  P+    L   + 
Subjt:  ERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQY---------HLPPMQN------------QSGFPNMIPQLNQGSA

Query:  MRGIPPDLGPGMATRNYGMPPASYVGPAYPGVPG--------------LQHPMAYPGGMMSPGVVSSSPGP----GPFTSGKNNSPTSSL----------
          G         A  +  M     +G    G+ G              +    A  GG+ S G+ + S GP        SG      ++L          
Subjt:  MRGIPPDLGPGMATRNYGMPPASYVGPAYPGVPG--------------LQHPMAYPGGMMSPGVVSSSPGP----GPFTSGKNNSPTSSL----------

Query:  -GKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
            +G Q EGP GANLFIYH+PQEFGD ++   F  FG V+SAKVF+DK + +SKCFGFVSYD+  +AQ+AI  MNG Q+G K+LKVQLKR    SKPY
Subjt:  -GKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

Q8GZ26 RNA-binding protein BRN21.1e-13960.8Show/hide
Query:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMD
        E + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++K TRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL    
Subjt:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMD

Query:  SNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK
                  EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+
Subjt:  SNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK

Query:  VQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGSAMRG------IPPDLGPGMATRNYGMP
        + K QS  S +   D Q+PS+FGA+ P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+   
Subjt:  VQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGSAMRG------IPPDLGPGMATRNYGMP

Query:  PASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVD
          +Y      G  GLQ+PMA+P GM+ P +  ++  PG   S    S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVD
Subjt:  PASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVD

Query:  KTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSK
        K +G+SKCFGF+SYDS  AAQ+AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  KTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSK

Q8LFS6 RNA-binding protein BRN19.8e-15765.65Show/hide
Query:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAE     R+++  EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYAD
Subjt:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA
        GELERL              EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWA
Subjt:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA

Query:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--SAMRGIPPD-LGPGMA
        DTE+ER  R++QKAQS  + + N D  +PSLFGA+ P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  +A++G  PD + P +A
Subjt:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--SAMRGIPPD-LGPGMA

Query:  TRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVL
         RN+ MPP +Y+G  YP + G   P AYP G++SP  +SSSPG    +     S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VL
Subjt:  TRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVL

Query:  SAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKP
        SAKVFVDK +GVSKCFGFVSYDS  AAQ+AI MMNG  LGGKKLKVQLKRD+   +P
Subjt:  SAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKP

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.8e-14160.8Show/hide
Query:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMD
        E + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++K TRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL    
Subjt:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMD

Query:  SNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK
                  EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+
Subjt:  SNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK

Query:  VQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGSAMRG------IPPDLGPGMATRNYGMP
        + K QS  S +   D Q+PS+FGA+ P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+   
Subjt:  VQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGSAMRG------IPPDLGPGMATRNYGMP

Query:  PASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVD
          +Y      G  GLQ+PMA+P GM+ P +  ++  PG   S    S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVD
Subjt:  PASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVD

Query:  KTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSK
        K +G+SKCFGF+SYDS  AAQ+AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  KTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSK

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.2e-14261.02Show/hide
Query:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMD
        E + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++K TRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL  +D
Subjt:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMD

Query:  SNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK
         +        EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+
Subjt:  SNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK

Query:  VQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGSAMRG------IPPDLGPGMATRNYGMP
        + K QS  S +   D Q+PS+FGA+ P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+   
Subjt:  VQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGSAMRG------IPPDLGPGMATRNYGMP

Query:  PASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVD
          +Y      G  GLQ+PMA+P GM+ P +  ++  PG   S    S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVD
Subjt:  PASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVD

Query:  KTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSK
        K +G+SKCFGF+SYDS  AAQ+AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  KTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSK

AT4G03110.1 RNA-binding protein-defense related 17.0e-15865.65Show/hide
Query:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAE     R+++  EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYAD
Subjt:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA
        GELERL              EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWA
Subjt:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA

Query:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--SAMRGIPPD-LGPGMA
        DTE+ER  R++QKAQS  + + N D  +PSLFGA+ P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  +A++G  PD + P +A
Subjt:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--SAMRGIPPD-LGPGMA

Query:  TRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVL
         RN+ MPP +Y+G  YP + G   P AYP G++SP  +SSSPG    +     S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VL
Subjt:  TRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVL

Query:  SAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKP
        SAKVFVDK +GVSKCFGFVSYDS  AAQ+AI MMNG  LGGKKLKVQLKRD+   +P
Subjt:  SAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKP

AT4G03110.2 RNA-binding protein-defense related 13.4e-14464.61Show/hide
Query:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAE     R+++  EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYAD
Subjt:  MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA
        GELERL              EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWA
Subjt:  GELERLVCMDSNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA

Query:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--SAMRGIPPD-LGPGMAT
        DTE+ER  R++QKAQS  + + N D  +PSLFGA+ P+GYVPPYNGYGY  PG+YG   Y LPP+QNQ+ F NMI Q NQG  +A++G  PD + P +A 
Subjt:  DTEKERQARKVQKAQSQASNVLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--SAMRGIPPD-LGPGMAT

Query:  RNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLS
        RN+ MPP +Y+G  YP + G   P AYP G++SP  +SSSPG    +     S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VLS
Subjt:  RNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLS

Query:  AKVFVDKTSGVSKCFGFVSYD
        AKVFVDK +GVSKCFG +S+D
Subjt:  AKVFVDKTSGVSKCFGFVSYD

AT4G16280.2 RNA binding;abscisic acid binding9.5e-3833.64Show/hide
Query:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMDSNGW
        +   +VKLFVG VP+  TE ++   F++   V EV +I+DK T   +GCCFV   + ++AD+A+ A HN+ TLPG + P+QV+YADGE ER+  +     
Subjt:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMDSNGW

Query:  LFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKVQKA
              E KLF+G L K  +E EV  +F Q+G ++D+ ++R   + S+GC F+KY +K+ A+AA++ +NG   M G + PL+V++A+ ++ +     + A
Subjt:  LFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKVQKA

Query:  QSQASNVLNADSQHPSLFGAMPP--LGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLG--PGMAT--RNYGMPPA
                             PP  LG  P +   G +   ++G       H  P +  +   N+ P  N G  +RG   D    PG AT   N G P  
Subjt:  QSQASNVLNADSQHPSLFGAMPP--LGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLG--PGMAT--RNYGMPPA

Query:  SYVGPAYPGVPGLQHPMAYPG
         Y      GVP L +P+  PG
Subjt:  SYVGPAYPGVPGLQHPMAYPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGGGAGTAGAGGAGAGAGAAAGGAGAGTAGTCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTGCCAAAGCATATGACCGAAGCTCAACTTCT
CGCAATGTTCCAAGAGTTTGCACTTGTAGACGAAGTCAACATCATCAGAGACAAGGCCACTCGCGCCTCTAGAGGTTGCTGTTTTGTGATCTGTCCTTCGAGGCAGGAGG
CGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGTGTGTATGGAT
AGTAATGGTTGGTTATTTCTGGAAAGAGCAGAACACAAACTCTTCATTGGAATGCTTCCGAAAAATGTGTCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAATATGGAAC
GATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAACG
GAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGTTCAGAAAGCTCAATCACAGGCCTCTAAT
GTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCT
TATGCAATATCATCTACCTCCAATGCAGAATCAATCTGGTTTCCCCAATATGATACCTCAATTAAACCAAGGAAGCGCAATGCGAGGGATCCCACCTGACCTTGGCCCGG
GTATGGCCACTAGAAATTATGGCATGCCTCCTGCAAGTTACGTTGGCCCTGCCTATCCTGGAGTTCCAGGTCTTCAACATCCCATGGCGTACCCTGGAGGAATGATGAGT
CCTGGGGTTGTGAGCAGTTCACCTGGTCCGGGGCCATTTACTAGTGGGAAGAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGAGGTCAGATTGAAGGTCCACC
TGGTGCTAATCTTTTTATTTATCACATACCTCAAGAATTTGGGGATCTGGAGCTTGCTAATTCTTTTCGAGCATTTGGGCGAGTTTTGAGCGCTAAAGTATTTGTTGACA
AAACATCTGGAGTTAGCAAATGTTTTGGGTTCGTTAGTTATGATTCTGCTGAGGCTGCTCAATCTGCCATAAGTATGATGAATGGATGCCAATTAGGTGGAAAGAAATTA
AAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGGGGAGTAGAGGAGAGAGAAAGGAGAGTAGTCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTGCCAAAGCATATGACCGAAGCTCAACTTCT
CGCAATGTTCCAAGAGTTTGCACTTGTAGACGAAGTCAACATCATCAGAGACAAGGCCACTCGCGCCTCTAGAGGTTGCTGTTTTGTGATCTGTCCTTCGAGGCAGGAGG
CGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGTGTGTATGGAT
AGTAATGGTTGGTTATTTCTGGAAAGAGCAGAACACAAACTCTTCATTGGAATGCTTCCGAAAAATGTGTCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAATATGGAAC
GATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAACG
GAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGTTCAGAAAGCTCAATCACAGGCCTCTAAT
GTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCT
TATGCAATATCATCTACCTCCAATGCAGAATCAATCTGGTTTCCCCAATATGATACCTCAATTAAACCAAGGAAGCGCAATGCGAGGGATCCCACCTGACCTTGGCCCGG
GTATGGCCACTAGAAATTATGGCATGCCTCCTGCAAGTTACGTTGGCCCTGCCTATCCTGGAGTTCCAGGTCTTCAACATCCCATGGCGTACCCTGGAGGAATGATGAGT
CCTGGGGTTGTGAGCAGTTCACCTGGTCCGGGGCCATTTACTAGTGGGAAGAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGAGGTCAGATTGAAGGTCCACC
TGGTGCTAATCTTTTTATTTATCACATACCTCAAGAATTTGGGGATCTGGAGCTTGCTAATTCTTTTCGAGCATTTGGGCGAGTTTTGAGCGCTAAAGTATTTGTTGACA
AAACATCTGGAGTTAGCAAATGTTTTGGGTTCGTTAGTTATGATTCTGCTGAGGCTGCTCAATCTGCCATAAGTATGATGAATGGATGCCAATTAGGTGGAAAGAAATTA
AAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGA
Protein sequenceShow/hide protein sequence
MAEGSRGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLVCMD
SNGWLFLERAEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKVQKAQSQASN
VLNADSQHPSLFGAMPPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGSAMRGIPPDLGPGMATRNYGMPPASYVGPAYPGVPGLQHPMAYPGGMMS
PGVVSSSPGPGPFTSGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKL
KVQLKRDNKQSKPY