| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6593155.1 U1 small nuclear ribonucleoprotein C, partial [Cucurbita argyrosperma subsp. sororia] | 1.4e-93 | 92.75 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPG PGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESN
PPV PRP+PGAPGYLP PTMPPMM PPGA MPGQVN+PSRPPPPAPIPGS PQPSSTNGAPL AP YQANPAAPGSGGYDSFT+MAQPSESN
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESN
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| XP_004148886.1 U1 small nuclear ribonucleoprotein C [Cucumis sativus] | 1.1e-96 | 95.9 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP+MPGAAPGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
PPVLPRPIPGAPGYLP PTMPPMM PPGAP+PGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPS YQANPAAPGSGGYDSFTSMAQP SESNH
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
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| XP_008451425.1 PREDICTED: U1 small nuclear ribonucleoprotein C [Cucumis melo] | 1.8e-96 | 95.9 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP++PGAAPGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
PPVLPRPIPGAPGYLP PTMPPMM PPGAP+PGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS YQANPAAPGSGGYDSFTSMAQP SESNH
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
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| XP_023515032.1 U1 small nuclear ribonucleoprotein C [Cucurbita pepo subsp. pepo] | 4.2e-93 | 93.26 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPG APGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESN
PPV PRP+PGAPGYLP PTMPPMM PPGA MPGQVNIPSRPPPPAPIPGS QPSSTNGAPL AP YQANPAAPGSGGYDSFT+MAQPSESN
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESN
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| XP_038899936.1 U1 small nuclear ribonucleoprotein C isoform X1 [Benincasa hispida] | 7.3e-98 | 95.36 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPGAAPGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESNH
PPVLPRP+PGAPGYLPAPTMPPMM PPGAPMPGQVNIP+RPPPPAP+PGSAPQPSSTNGAPLA PSMYQANPAAPGSGGY+SFT+MAQPSE NH
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESNH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K515 U1 small nuclear ribonucleoprotein C | 5.1e-97 | 95.9 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP+MPGAAPGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
PPVLPRPIPGAPGYLP PTMPPMM PPGAP+PGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPS YQANPAAPGSGGYDSFTSMAQP SESNH
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
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| A0A1S3BS92 U1 small nuclear ribonucleoprotein C | 8.7e-97 | 95.9 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP++PGAAPGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
PPVLPRPIPGAPGYLP PTMPPMM PPGAP+PGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS YQANPAAPGSGGYDSFTSMAQP SESNH
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
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| A0A5A7UNW2 U1 small nuclear ribonucleoprotein C | 8.7e-97 | 95.9 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP++PGAAPGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
PPVLPRPIPGAPGYLP PTMPPMM PPGAP+PGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS YQANPAAPGSGGYDSFTSMAQP SESNH
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQP-SESNH
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| A0A6J1H7P8 U1 small nuclear ribonucleoprotein C | 4.5e-93 | 92.75 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPG APGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESN
PPV PRP+PGAPGYLP PTMPPMM PPGA MPGQVN+PSRPPPPAPIPGS PQ SSTNGAPL AP YQANPAAPGSGGYDSFT+MAQPSESN
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESN
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| A0A6J1KWY5 U1 small nuclear ribonucleoprotein C | 2.6e-93 | 92.75 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPG APGLMPGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMPGIR
Query: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESN
PPV PRP+PGAPGYLP PTMPPMM PPGA MPGQVN+PSRPPPPAPIPGS QPSSTNGAPL AP YQANPAAPGSGGYDSFT+MAQPSESN
Subjt: PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYDSFTSMAQPSESN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| C5XYW4 U1 small nuclear ribonucleoprotein C-2 | 1.1e-48 | 59.21 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPIMPGAAP--
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP P
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPIMPGAAP--
Query: GLMPGIRPPVLPRP----IPGAPGYLPAPTMPP-MMGPPGAPMPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSMYQANPAAPG
LMPG+RPP+LP P PGAP +P P PP M PGAP PG + P PP P P P + P P+S GAP+ A P++YQANP AP
Subjt: GLMPGIRPPVLPRP----IPGAPGYLPAPTMPP-MMGPPGAPMPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSMYQANPAAPG
Query: ---SGGYDS-------FTSMAQPSESNH
SG + S A PSE NH
Subjt: ---SGGYDS-------FTSMAQPSESNH
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| C5XZK6 U1 small nuclear ribonucleoprotein C-1 | 9.4e-48 | 59.74 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPIMPGA---A
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP A
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPIMPGA---A
Query: PG--LMPGIRPPVLPRP-IPGAPGYLPA---PTMPP-MMGPPGAPMPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSMYQANPA
PG LMPG+RPP+LP P IPG PG P P PP M PGAP PG + P PP P P P + P P+S GAP+ A P++YQ NP
Subjt: PG--LMPGIRPPVLPRP-IPGAPGYLPA---PTMPP-MMGPPGAPMPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSMYQANPA
Query: APG---SGGYDS-------FTSMAQPSESNH
AP SG + S AQPSE NH
Subjt: APG---SGGYDS-------FTSMAQPSESNH
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| F6HQ26 U1 small nuclear ribonucleoprotein C | 1.7e-65 | 69.95 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPIMP--GAAP
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHL+ RPRLPVLPTP MP G+AP
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPIMP--GAAP
Query: -----GLMPGIRPPVLPRPIPGAPGYLPAPTMPPMMGPPGA---PMPGQVNIPSRPP----PPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYD
L+PG+RPPVLPRP+PGAPGY+PAP MP MM PPGA PMP ++P RPP PPA +PGS P+S + MYQANPA P SGG+D
Subjt: -----GLMPGIRPPVLPRPIPGAPGYLPAPTMPPMMGPPGA---PMPGQVNIPSRPP----PPAPIPGSAPQPSSTNGAPLAAPSMYQANPAAPGSGGYD
Query: SFTSMAQPSESNH
SF AQ E+NH
Subjt: SFTSMAQPSESNH
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| Q32PA0 U1 small nuclear ribonucleoprotein C | 5.1e-17 | 43.05 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPG-AAPGLMPGI
++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ AAFQQ + P P +PG PG+MP
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPG-AAPGLMPGI
Query: R---PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPI
PP++P P PG +P P M P G MP P PP P+
Subjt: R---PPVLPRPIPGAPGYLPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPI
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| Q56XE4 U1 small nuclear ribonucleoprotein C | 5.5e-48 | 61.22 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMP-GI
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ +QQVGA +NQH+L RPR P++ PG MP G+
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPIMPGAAPGLMP-GI
Query: RPPVLPRPIPGAPGYLPAPTMPPMMGPPGAPM-PGQVNIPSRPPPPAPIPGS-------APQPSSTNGAP-----LAAPSMYQANPAAPGSGGYDS
RPPVLPRP+ GY+P P +P MM PPGAP+ P N RPP APIPG AP P G P L P Y NPAAP SG +++
Subjt: RPPVLPRPIPGAPGYLPAPTMPPMMGPPGAPM-PGQVNIPSRPPPPAPIPGS-------APQPSSTNGAP-----LAAPSMYQANPAAPGSGGYDS
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