; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022912 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022912
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationChr05:29558517..29558840
RNA-Seq ExpressionHG10022912
SyntenyHG10022912
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]5.2e-2164.55Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYEVGSVL
        MA+IR L+SIALLALLF FSESL TS+SLTGIP RNI  T AH I N SVESS QRKS+    + RRRIRP+ I  S   H KS   RSR AS+EVGS+L
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYEVGSVL

Query:  GVCIFLRLLL
         +CIFL L L
Subjt:  GVCIFLRLLL

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]2.3e-0545.76Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIG---SSHRKSEAKRSRGA
        MA+I+SLL I+LLALLF FSESL T        SNS+TG+ RRN+ QTA H I +S  + +   K          RIRPV+ G   + +RKS A RS+ A
Subjt:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIG---SSHRKSEAKRSRGA

Query:  SYEVGSVLGVCIFLRLLL
        S+ +G +L    F RL L
Subjt:  SYEVGSVLGVCIFLRLLL

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1154.21Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSSHRKSEAKRSRGASYE
        MA+++SL+S+ALLALL +FSESL          SNSLTG+ RRN+ QTAAH I ++SVESS +RK     +  +RR+RPV+ G+  R S A RSR AS  
Subjt:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSSHRKSEAKRSRGASYE

Query:  VGSVLGV
        VGSVL V
Subjt:  VGSVLGV

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]4.0e-0546.09Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSSHRKSEAKRSRGASYE
        MA+I++LLSIAL+ALL +F ESLPT        S SL GI RRNI QT A              K  N  I+ R R+RPV IG   + S A RSR A   
Subjt:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSSHRKSEAKRSRGASYE

Query:  VGSVLGVCIFLRLLL
        VGS+L + + L L L
Subjt:  VGSVLGVCIFLRLLL

XP_008451651.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]8.5e-1664.21Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE
        MA+IR L+SIALLALLF FSESL TS+SLTGIP RNI  T AH I N SVESS QRKS+    + RRRIRP+ I  S   H KS   RSR AS+E
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE

TrEMBL top hitse value%identityAlignment
A0A0A0K929 Uncharacterized protein2.5e-1357.39Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQ--RKSSNFRIE--ARRRIRPVSIGSS---HRKSEAKR-SRGASYE
        MA+IR LLSIA LA LF FSESL TS+SLTGIP R I  TAAH I + SVE SS   RKS+   I+   +RR  P+ + SS   H KS A R S  AS E
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQ--RKSSNFRIE--ARRRIRPVSIGSS---HRKSEAKR-SRGASYE

Query:  VGSVLGVCIFLRLLL
        VGS+L +CIFL L L
Subjt:  VGSVLGVCIFLRLLL

A0A0A0KAQ7 Uncharacterized protein2.1e-0443.93Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPV--SIGSSHRKSEAKRSRGAS
        MA+I+SL+SI+LLALLF FSESL T        SNS+T + RRNI QTA H I +S  + + + K          R RP+    G+  R S A RSR  S
Subjt:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPV--SIGSSHRKSEAKRSRGAS

Query:  YEVGSVL
        + +G +L
Subjt:  YEVGSVL

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like4.1e-1664.21Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE
        MA+IR L+SIALLALLF FSESL TS+SLTGIP RNI  T AH I N SVESS QRKS+    + RRRIRP+ I  S   H KS   RSR AS+E
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYE

A0A5A7VLE5 Protein no-on-transient A-like1.1e-0545.76Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIG---SSHRKSEAKRSRGA
        MA+I+SLL I+LLALLF FSESL T        SNS+TG+ RRN+ QTA H I +S  + +   K          RIRPV+ G   + +RKS A RS+ A
Subjt:  MASIRSLLSIALLALLFIFSESLPT--------SNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIG---SSHRKSEAKRSRGA

Query:  SYEVGSVLGVCIFLRLLL
        S+ +G +L    F RL L
Subjt:  SYEVGSVLGVCIFLRLLL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like2.5e-2164.55Show/hide
Query:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYEVGSVL
        MA+IR L+SIALLALLF FSESL TS+SLTGIP RNI  T AH I N SVESS QRKS+    + RRRIRP+ I  S   H KS   RSR AS+EVGS+L
Subjt:  MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSS---HRKSEAKRSRGASYEVGSVL

Query:  GVCIFLRLLL
         +CIFL L L
Subjt:  GVCIFLRLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCAGATCCCTACTTTCCATAGCTCTCTTGGCTCTTCTCTTCATCTTCTCCGAATCACTACCCACTTCCAATTCTCTCACCGGAATTCCTCGCCGGAACAT
CTTTCAGACGGCAGCTCATGGGATTACAAATAGCAGTGTTGAGTCCTCTTCCCAAAGGAAGTCGAGTAATTTCCGTATCGAAGCTAGAAGGCGGATTCGACCTGTAAGTA
TCGGCAGCAGCCACCGTAAATCGGAGGCGAAACGGAGCCGAGGAGCATCCTATGAGGTTGGATCTGTGTTGGGTGTATGCATTTTCTTGAGATTGCTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCAGATCCCTACTTTCCATAGCTCTCTTGGCTCTTCTCTTCATCTTCTCCGAATCACTACCCACTTCCAATTCTCTCACCGGAATTCCTCGCCGGAACAT
CTTTCAGACGGCAGCTCATGGGATTACAAATAGCAGTGTTGAGTCCTCTTCCCAAAGGAAGTCGAGTAATTTCCGTATCGAAGCTAGAAGGCGGATTCGACCTGTAAGTA
TCGGCAGCAGCCACCGTAAATCGGAGGCGAAACGGAGCCGAGGAGCATCCTATGAGGTTGGATCTGTGTTGGGTGTATGCATTTTCTTGAGATTGCTTTTGTGA
Protein sequenceShow/hide protein sequence
MASIRSLLSIALLALLFIFSESLPTSNSLTGIPRRNIFQTAAHGITNSSVESSSQRKSSNFRIEARRRIRPVSIGSSHRKSEAKRSRGASYEVGSVLGVCIFLRLLL