CuGenDBv2

Gene ID	HG10022961
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	outer envelope pore protein 16-4, chloroplastic
Genome location	Chr05:29992764..29995754
RNA-Seq Expression	HG10022961
Synteny	HG10022961
Gene Ontology terms	GO:0045039 - protein insertion into mitochondrial inner membrane (biological process) GO:0071806 - protein transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component) GO:0008320 - protein transmembrane transporter activity (molecular function) GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domains	IPR039175 - Mitochondrial import inner membrane translocase subunit TIM22

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136026.1 outer envelope pore protein 16-4, chloroplastic [Cucumis sativus]

1.6e-46

78.46

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKN                      GLVAGTFTLTHCGIQRYR++NDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        AT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_008451566.1 PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo]

7.2e-47

79.23

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKN                      GLVAGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        AT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_022143748.1 outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia]

8.5e-48

81.54

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN                      GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        ATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_022960078.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata]

5.5e-47

80.77

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN                      GLVAG FTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        ATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_038896772.1 outer envelope pore protein 16-4, chloroplastic [Benincasa hispida]

5.5e-47

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        ME+ELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN                      GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGA I
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        ATRTRSWSQVVGM ALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BSK4 outer envelope pore protein 16-4, chloroplastic

3.5e-47

79.23

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKN                      GLVAGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        AT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A5A7VIR9 Outer envelope pore protein 16-4

3.5e-47

79.23

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKN                      GLVAGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        AT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1CRH2 outer envelope pore protein 16-4, chloroplastic isoform X2

4.1e-48

81.54

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN                      GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        ATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1H7T5 outer envelope pore protein 16-4, chloroplastic

2.7e-47

80.77

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN                      GLVAG FTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        ATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1KSU1 outer envelope pore protein 16-4, chloroplastic

2.7e-47

80.77

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN                      GLVAG FTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKN----------------------GLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        ATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKSL

SwissProt top hits

e value

%identity

Alignment

Q5BIN4 Mitochondrial import inner membrane translocase subunit Tim22

9.3e-05

38.71

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Query:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY
        +V   F+ T C ++ YR K+DW N +I+G + G AI  R    + V+G     +AFSAA +Y
Subjt:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY

Q9CQ85 Mitochondrial import inner membrane translocase subunit Tim22

2.7e-04

37.1

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Query:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY
        +V   F+ T C ++ YR K+DW N +I+G + G AI  R    +  +G     +AFSAA +Y
Subjt:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY

Q9JKW1 Mitochondrial import inner membrane translocase subunit Tim22

2.7e-04

37.1

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Query:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY
        +V   F+ T C ++ YR K+DW N +I+G + G AI  R    +  +G     +AFSAA +Y
Subjt:  LVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEY

Q9LZH8 Outer envelope pore protein 16-4, chloroplastic

4.4e-31

54.26

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRK----------------------NGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK                       GLV+G FT+THCG+QRYR KNDW+N L+ GAVAGAA+
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRK----------------------NGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKS
        A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKS

Arabidopsis top hits

e value

%identity

Alignment

AT3G62880.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

3.1e-32

54.26

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRK----------------------NGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK                       GLV+G FT+THCG+QRYR KNDW+N L+ GAVAGAA+
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRK----------------------NGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKS
        A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKS

AT3G62880.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

3.1e-32

54.26

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRK----------------------NGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI
        ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK                       GLV+G FT+THCG+QRYR KNDW+N L+ GAVAGAA+
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRK----------------------NGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAI

Query:  ATRTRSWSQVVGMAALVSAFSAAAEYSKS
        A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  ATRTRSWSQVVGMAALVSAFSAAAEYSKS

Sequences

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CDS sequence

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ATGGAAGACGAACTCAACGGCGTCGTTCCATGTTCATCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTATGGGTCCGTACAA
TTCTCGTAAAAATGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAAGAATGATTGGTTGAATGGTTTGATTGCGGGTGCGGTCG
CAGGAGCAGCGATTGCTACAAGGACTAGAAGTTGGTCGCAGGTAGTTGGGATGGCTGCCCTTGTCTCTGCCTTCAGTGCTGCTGCTGAATATTCAAAATCACTTTAG

mRNA sequence

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Protein sequence

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MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

HG10022961 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome