; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022962 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022962
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L22-2
Genome locationChr05:29998656..30002478
RNA-Seq ExpressionHG10022962
SyntenyHG10022962
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]2.3e-3398.73Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

XP_022960081.1 60S ribosomal protein L22-2-like [Cucurbita moschata]1.1e-3297.47Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]5.0e-3397.47Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

XP_023514139.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]3.3e-3296.2Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGA GDSVTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]5.0e-3397.47Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

TrEMBL top hitse value%identityAlignment
A0A0A0K637 Uncharacterized protein1.1e-3398.73Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

A0A1S3BRQ9 60S ribosomal protein L22-21.1e-3398.73Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

A0A5D3D2W6 60S ribosomal protein L22-2-like1.1e-3398.73Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

A0A6J1DLK6 60S ribosomal protein L22-21.1e-3398.73Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

A0A6J1JVR1 60S ribosomal protein L22-2-like2.4e-3397.47Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTR+KNKITVNSDSNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

SwissProt top hitse value%identityAlignment
P47198 60S ribosomal protein L229.2e-1459.46Show/hide
Query:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTREKNKITVNSDSNFSKR
        A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSKR
Subjt:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTREKNKITVNSDSNFSKR

Q98TF8 60S ribosomal protein L225.4e-1460Show/hide
Query:  AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTREKNKITVNSDSNFSKR
        AA GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSKR
Subjt:  AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTREKNKITVNSDSNFSKR

Q9FE58 60S ribosomal protein L22-38.1e-2677.22Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TREK+KITV +D  FSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

Q9M9W1 60S ribosomal protein L22-23.6e-2678.48Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TREK+KITV +D  FSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

Q9SRX7 Putative 60S ribosomal protein L22-11.2e-2167.09Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family8.6e-2367.09Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

AT3G05560.1 Ribosomal L22e protein family2.6e-2778.48Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TREK+KITV +D  FSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

AT3G05560.2 Ribosomal L22e protein family2.6e-2778.48Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TREK+KITV +D  FSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

AT3G05560.3 Ribosomal L22e protein family2.6e-2778.48Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TREK+KITV +D  FSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR

AT5G27770.1 Ribosomal L22e protein family5.7e-2777.22Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TREK+KITV +D  FSKR
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGTGTGACCTTCGTCATCGATTGTGCGAAGCCAGTTGAGGACAAGATCATGGACATCGCCTC
GTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGTAAAGCCGGGGCACTTGGTGACTCGGTTACCGTCACTCGGGAGAAGAACAAGATCACCGTCAACTCCGATA
GCAATTTCTCCAAGAGGTTAGTTAGTGTGCCGGTGGAGTGTGGTTGTGGTCGTCAATTGGGCAGAGGTTCAGATGAGAATGAAGAAGGCAATCCGACAACCATAACAAAG
AAAAGAGCACAAAGAGAAAAAGAAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGTGTGACCTTCGTCATCGATTGTGCGAAGCCAGTTGAGGACAAGATCATGGACATCGCCTC
GTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGTAAAGCCGGGGCACTTGGTGACTCGGTTACCGTCACTCGGGAGAAGAACAAGATCACCGTCAACTCCGATA
GCAATTTCTCCAAGAGGTTAGTTAGTGTGCCGGTGGAGTGTGGTTGTGGTCGTCAATTGGGCAGAGGTTCAGATGAGAATGAAGAAGGCAATCCGACAACCATAACAAAG
AAAAGAGCACAAAGAGAAAAAGAAAGTTAG
Protein sequenceShow/hide protein sequence
MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTREKNKITVNSDSNFSKRLVSVPVECGCGRQLGRGSDENEEGNPTTITK
KRAQREKES