; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022973 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022973
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic
Genome locationChr05:30094315..30096120
RNA-Seq ExpressionHG10022973
SyntenyHG10022973
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067975.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]6.2e-8484.77Show/hide
Query:  CSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDP
        C      + +DLLPCFL QRGFKYH QRNPN + QAIKCSSSLL SFT SKI  SLAY  PPLKPAAAYEAARTIPFALQDASM+ASDF+N+++LADLDP
Subjt:  CSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDP

Query:  GMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        G AKLAI  LGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  GMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

TYK18148.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]1.8e-8384.26Show/hide
Query:  CSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDP
        C      + +DLLPCFL QRGFKYH QRNPN + QAIKCSSSLL SFT SKI  SLAY  PPLKPAAAYEAARTIPFAL+DASM+ASDF+N+++LADLDP
Subjt:  CSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDP

Query:  GMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        G AKLAI  LGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  GMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_004136016.2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 [Cucumis sativus]3.4e-8280.86Show/hide
Query:  AAAACSSFSSIRVIDLLPCFLVQ--------RGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASD
        AA ACSS SSIRVI +    L          RGFKYH QRNPNC+ QAIKCSSSLL SFT SK  LSLAY  PPLKPAAAYEAARTIPF LQDASM+ASD
Subjt:  AAAACSSFSSIRVIDLLPCFLVQ--------RGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASD

Query:  FMNNVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGL
        F+N+++LADLDPG AKLAI  LGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQGL
Subjt:  FMNNVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGL

Query:  LVLLSQQVS
        LVLLSQQVS
Subjt:  LVLLSQQVS

XP_038896182.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 [Benincasa hispida]6.4e-8987.86Show/hide
Query:  AAACSSFSSIRVI---DLLPCF---LVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMN
        AAACSS S IRVI    L+P +      RGFKYH QRNPNCR QA KCSSS+LDSFT SK+ LSLAYAT PLKPAAAYEAARTIPFALQDASMSASDFMN
Subjt:  AAACSSFSSIRVI---DLLPCF---LVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMN

Query:  NVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVL
        NV+LADLDPGMAKLAIG LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVL
Subjt:  NVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVL

Query:  LSQQVS
        LSQQVS
Subjt:  LSQQVS

XP_038896183.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 [Benincasa hispida]1.6e-8788.5Show/hide
Query:  AAACSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLAD
        AAACSS S IR           RGFKYH QRNPNCR QA KCSSS+LDSFT SK+ LSLAYAT PLKPAAAYEAARTIPFALQDASMSASDFMNNV+LAD
Subjt:  AAACSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLAD

Query:  LDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        LDPGMAKLAIG LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  LDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

TrEMBL top hitse value%identityAlignment
A0A0A0K9A7 Uncharacterized protein1.7e-8280.86Show/hide
Query:  AAAACSSFSSIRVIDLLPCFLVQ--------RGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASD
        AA ACSS SSIRVI +    L          RGFKYH QRNPNC+ QAIKCSSSLL SFT SK  LSLAY  PPLKPAAAYEAARTIPF LQDASM+ASD
Subjt:  AAAACSSFSSIRVIDLLPCFLVQ--------RGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASD

Query:  FMNNVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGL
        F+N+++LADLDPG AKLAI  LGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLL+ATRKVIPPLGGVDVTPVVWFGL+SFLNEILLGPQGL
Subjt:  FMNNVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGL

Query:  LVLLSQQVS
        LVLLSQQVS
Subjt:  LVLLSQQVS

A0A1S3BSI7 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic4.8e-8283.74Show/hide
Query:  MAAAAACSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVS
        MAA AACSS SSIR           RGFKYH QRNPN + QAIKCSSSLL SFT SKI  SLAY  PPLKPAAAYEAARTIPFALQDASM+ASDF+N+++
Subjt:  MAAAAACSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVS

Query:  LADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQ
        LADLDPG AKLAI  LGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQ
Subjt:  LADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQ

Query:  QVS
        QVS
Subjt:  QVS

A0A5A7VQJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB33.0e-8484.77Show/hide
Query:  CSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDP
        C      + +DLLPCFL QRGFKYH QRNPN + QAIKCSSSLL SFT SKI  SLAY  PPLKPAAAYEAARTIPFALQDASM+ASDF+N+++LADLDP
Subjt:  CSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDP

Query:  GMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        G AKLAI  LGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  GMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A5D3D3A7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB38.8e-8484.26Show/hide
Query:  CSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDP
        C      + +DLLPCFL QRGFKYH QRNPN + QAIKCSSSLL SFT SKI  SLAY  PPLKPAAAYEAARTIPFAL+DASM+ASDF+N+++LADLDP
Subjt:  CSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDP

Query:  GMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        G AKLAI  LGP LS FSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  GMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A6J1GQG0 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic9.1e-8183.58Show/hide
Query:  AAAACSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLA
        AA ACSS S+IR           RGF YH Q NPNCR QA KCSSSLL SFT SKI L L YATPPLKP     AARTIPFALQDAS++ASDFMNNVSLA
Subjt:  AAAACSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLA

Query:  DLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQV
        DLDPG AKLAIG LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQV
Subjt:  DLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQV

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
Q8RWM7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic1.2e-4576.98Show/hide
Query:  EAARTIPFALQDASMSASDFMNNVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV
        EAA T     Q  S+S S  + N+SLADLDPG AKLAIG+LGP LSAF FLFI RIVMSWYPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPV
Subjt:  EAARTIPFALQDASMSASDFMNNVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV

Query:  VWFGLVSFLNEILLGPQGLLVLLSQQ
        VWFGLVSFL+EIL+GPQGLLVL+SQQ
Subjt:  VWFGLVSFLNEILLGPQGLLVLLSQQ

Arabidopsis top hitse value%identityAlignment
AT3G07430.1 YGGT family protein2.3e-0427.93Show/hide
Query:  SMSASDFMNNVSLADLDPG-----MAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVS
        S+S +  +   SL D  PG     +  +A+G +  +L  +S + + R+++SW+P +P  + P        +P L   R +IPP+   +DV+P++ F ++ 
Subjt:  SMSASDFMNNVSLADLDPG-----MAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVS

Query:  FLNEILLGPQG
         L  I+ G  G
Subjt:  FLNEILLGPQG

AT4G27990.1 YGGT family protein8.9e-0429.11Show/hide
Query:  LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG
        L  +L  +S + + R+++SW+P +P  + P        +P L   R +IPP+   +DV+P++ F ++  L  IL   +G
Subjt:  LGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG

AT5G21920.1 YGGT family protein5.2e-0433.71Show/hide
Query:  MNNVSLADLDPG--MAKLAI--GLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPT--EPLLIATRKVIPPLGGVDVTPVVWF
        M+N   A + PG  +A L +  GL+  FL+ ++ + + R+V++W+P  P    P ++    T  +P L   R  IPPLGG+D++P++ F
Subjt:  MNNVSLADLDPG--MAKLAI--GLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPT--EPLLIATRKVIPPLGGVDVTPVVWF

AT5G36120.1 cofactor assembly, complex C (B6F)8.5e-4776.98Show/hide
Query:  EAARTIPFALQDASMSASDFMNNVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV
        EAA T     Q  S+S S  + N+SLADLDPG AKLAIG+LGP LSAF FLFI RIVMSWYPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPV
Subjt:  EAARTIPFALQDASMSASDFMNNVSLADLDPGMAKLAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPV

Query:  VWFGLVSFLNEILLGPQGLLVLLSQQ
        VWFGLVSFL+EIL+GPQGLLVL+SQQ
Subjt:  VWFGLVSFLNEILLGPQGLLVLLSQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCCGCCTGCTCCTCTTTCAGCTCCATTCGAGTAATAGATTTATTACCTTGTTTCCTTGTACAGAGAGGCTTCAAGTACCATTCTCAAAGGAATCCAAA
CTGCAGAGGCCAAGCAATCAAATGTAGCTCATCTTTGTTGGATTCTTTTACCTGTTCCAAGATTCGTCTGTCACTGGCCTATGCCACCCCTCCATTAAAGCCAGCTGCTG
CATATGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCTATGTCTGCCTCTGATTTCATGAACAATGTGTCCTTGGCCGACCTCGATCCAGGAATGGCAAAG
CTTGCGATCGGCCTTCTGGGGCCATTTCTCTCGGCATTTTCGTTTTTGTTTATTGCGAGAATAGTAATGTCTTGGTATCCCAAGTTGCCTGTGGGGAAGTTTCCATATGT
TATAGCTTATGCCCCCACTGAACCACTTCTAATTGCAACAAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGATGTAACGCCAGTCGTCTGGTTCGGATTGGTTAGTTTTC
TCAACGAGATATTGCTTGGTCCCCAAGGGCTGCTTGTCCTCCTTTCTCAACAGGTCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGCCGCCTGCTCCTCTTTCAGCTCCATTCGAGTAATAGATTTATTACCTTGTTTCCTTGTACAGAGAGGCTTCAAGTACCATTCTCAAAGGAATCCAAA
CTGCAGAGGCCAAGCAATCAAATGTAGCTCATCTTTGTTGGATTCTTTTACCTGTTCCAAGATTCGTCTGTCACTGGCCTATGCCACCCCTCCATTAAAGCCAGCTGCTG
CATATGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCTATGTCTGCCTCTGATTTCATGAACAATGTGTCCTTGGCCGACCTCGATCCAGGAATGGCAAAG
CTTGCGATCGGCCTTCTGGGGCCATTTCTCTCGGCATTTTCGTTTTTGTTTATTGCGAGAATAGTAATGTCTTGGTATCCCAAGTTGCCTGTGGGGAAGTTTCCATATGT
TATAGCTTATGCCCCCACTGAACCACTTCTAATTGCAACAAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGATGTAACGCCAGTCGTCTGGTTCGGATTGGTTAGTTTTC
TCAACGAGATATTGCTTGGTCCCCAAGGGCTGCTTGTCCTCCTTTCTCAACAGGTCAGCTGA
Protein sequenceShow/hide protein sequence
MAAAAACSSFSSIRVIDLLPCFLVQRGFKYHSQRNPNCRGQAIKCSSSLLDSFTCSKIRLSLAYATPPLKPAAAYEAARTIPFALQDASMSASDFMNNVSLADLDPGMAK
LAIGLLGPFLSAFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS