; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10022990 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022990
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTwo-component response regulator
Genome locationChr05:30281440..30284188
RNA-Seq ExpressionHG10022990
SyntenyHG10022990
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR044841 - Transcription factor LUX/BOA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD37046.1 TPA_asm: hypothetical protein HUJ06_007687 [Nelumbo nucifera]1.7e-1146.32Show/hide
Query:  LAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISLDVTKRRS
        + K      KR+R +WT ELHQ F+DAV  L  EKA+PKKILE M   G+  +TR  +ASHLQKYR+ LKR   + +AS+ P  S++  +  + S
Subjt:  LAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISLDVTKRRS

KAA0046668.1 type B response regulator [Cucumis melo var. makuwa]6.6e-5651.04Show/hide
Query:  ELGGPSTAHGGEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR-HLEVDKA
        ELGGPSTA GGEIN FD++  L +R  IG +RTRFIWT E HQIF++AVN+LTL++AVP+KILEYMR CGVQNITRAIVASHLQKYRL LK+ H+EVDKA
Subjt:  ELGGPSTAHGGEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR-HLEVDKA

Query:  SKLPSQSISLDVTKRRSNQEEDMRK------------------------------QMLQENVI-CEMKHQRWPLI-ESLLGPGIKLHNMFFPHLYKKNQH
        S++P ++IS + T  R NQEE+MR                               Q LQEN++  EM +QRWPL  ESL  PG+   NMF P    KN+ 
Subjt:  SKLPSQSISLDVTKRRSNQEEDMRK------------------------------QMLQENVI-CEMKHQRWPLI-ESLLGPGIKLHNMFFPHLYKKNQH

Query:  IRLPNLPNY------------------QFSRYVDENNNNNVIVPLINDRLTNDV-SNDCLHL-QILRE---YQEAYKDFYDHSMHIRP
          L NLPN                   QF+RY D NNNNNV+  LIND L+N V  ND  H  ++LRE   YQE   D +D  M+I+P
Subjt:  IRLPNLPNY------------------QFSRYVDENNNNNVIVPLINDRLTNDV-SNDCLHL-QILRE---YQEAYKDFYDHSMHIRP

KAE8009422.1 hypothetical protein FH972_005859 [Carpinus fangiana]1.3e-1160Show/hide
Query:  IGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        +GAK++R IWT +LH  F+  VN L L++AVPKKILE M+  GV N+TR  VASHLQKYRL L++
Subjt:  IGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

KAG6593219.1 Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. sororia]8.5e-1946.85Show/hide
Query:  GGPSTAHGGEINCFDLEANLAK---RKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRH-LEVDK
        GG S   GGE+    +E+  +K   R+E   KR RF+WTDELH+IF+ A N  TL++AVP+KILE+MR  GV+NITRAI+ASHLQKYRL+LKR+ L+VDK
Subjt:  GGPSTAHGGEINCFDLEANLAK---RKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRH-LEVDK

Query:  A------SKLPSQSISLDVTKRRSNQEEDMRKQMLQENVICEM
        +      S  PS  I  +  +R  + +  M       N+  +M
Subjt:  A------SKLPSQSISLDVTKRRSNQEEDMRKQMLQENVICEM

XP_007508971.1 type-b response regulator [Bathycoccus prasinos]1.3e-1147.42Show/hide
Query:  GGPSTAHGGEINCFDLEANLAK-------RKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        G P+TA G ++N   ++ N A            G+K+ R +W+ ELHQ F++AVN L ++KAVPK+IL+ M    VQ +TR  VASHLQKYRL LKR
Subjt:  GGPSTAHGGEINCFDLEANLAK-------RKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

TrEMBL top hitse value%identityAlignment
A0A0A0KB26 Uncharacterized protein1.5e-2159.26Show/hide
Query:  ENSAAPTA------------GELGGPSTAHGG-EINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAI
        ENSA PTA            GELGG S A  G + N FD +  L +R+EI  +RTRFIWTDE H+IF++AV+ LTL++AVP+KILEYM  CGVQNITRAI
Subjt:  ENSAAPTA------------GELGGPSTAHGG-EINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAI

Query:  VASHLQKY
        VASHLQ +
Subjt:  VASHLQKY

A0A1U8BCS5 two-component response regulator ARR14-like8.3e-1246.32Show/hide
Query:  LAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISLDVTKRRS
        + K      KR+R +WT ELHQ F+DAV  L  EKA+PKKILE M   G+  +TR  +ASHLQKYR+ LKR   + +AS+ P  S++  +  + S
Subjt:  LAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISLDVTKRRS

A0A5D3D1X5 Type B response regulator3.2e-5651.04Show/hide
Query:  ELGGPSTAHGGEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR-HLEVDKA
        ELGGPSTA GGEIN FD++  L +R  IG +RTRFIWT E HQIF++AVN+LTL++AVP+KILEYMR CGVQNITRAIVASHLQKYRL LK+ H+EVDKA
Subjt:  ELGGPSTAHGGEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR-HLEVDKA

Query:  SKLPSQSISLDVTKRRSNQEEDMRK------------------------------QMLQENVI-CEMKHQRWPLI-ESLLGPGIKLHNMFFPHLYKKNQH
        S++P ++IS + T  R NQEE+MR                               Q LQEN++  EM +QRWPL  ESL  PG+   NMF P    KN+ 
Subjt:  SKLPSQSISLDVTKRRSNQEEDMRK------------------------------QMLQENVI-CEMKHQRWPLI-ESLLGPGIKLHNMFFPHLYKKNQH

Query:  IRLPNLPNY------------------QFSRYVDENNNNNVIVPLINDRLTNDV-SNDCLHL-QILRE---YQEAYKDFYDHSMHIRP
          L NLPN                   QF+RY D NNNNNV+  LIND L+N V  ND  H  ++LRE   YQE   D +D  M+I+P
Subjt:  IRLPNLPNY------------------QFSRYVDENNNNNVIVPLINDRLTNDV-SNDCLHL-QILRE---YQEAYKDFYDHSMHIRP

A0A5N6QU17 Uncharacterized protein6.3e-1260Show/hide
Query:  IGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        +GAK++R IWT +LH  F+  VN L L++AVPKKILE M+  GV N+TR  VASHLQKYRL L++
Subjt:  IGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

K8EP92 Type-b response regulator6.3e-1247.42Show/hide
Query:  GGPSTAHGGEINCFDLEANLAK-------RKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        G P+TA G ++N   ++ N A            G+K+ R +W+ ELHQ F++AVN L ++KAVPK+IL+ M    VQ +TR  VASHLQKYRL LKR
Subjt:  GGPSTAHGGEINCFDLEANLAK-------RKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

SwissProt top hitse value%identityAlignment
A2X1N2 Two-component response regulator ORR241.6e-1262.9Show/hide
Query:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        K+ R +W+ ELH+ F+ AVN L +EKAVPKKIL+ M    V+NITR  VASHLQKYRL LKR
Subjt:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

B8AEH1 Two-component response regulator ORR232.1e-1245.45Show/hide
Query:  GEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISL
        GE+N  D++   A       K+ R +W+ ELH+ F+ AVN L ++KAVPK+ILE M    V+ +TR  VASHLQKYRL LKR       S + SQ +S+
Subjt:  GEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISL

Q6H805 Two-component response regulator ORR241.6e-1262.9Show/hide
Query:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        K+ R +W+ ELH+ F+ AVN L +EKAVPKKIL+ M    V+NITR  VASHLQKYRL LKR
Subjt:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

Q6K8X6 Two-component response regulator ORR232.1e-1245.45Show/hide
Query:  GEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISL
        GE+N  D++   A       K+ R +W+ ELH+ F+ AVN L ++KAVPK+ILE M    V+ +TR  VASHLQKYRL LKR       S + SQ +S+
Subjt:  GEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISL

Q8L9Y3 Two-component response regulator ARR144.7e-1248.86Show/hide
Query:  AKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISLDVTKRRSN
        +K++R +W+ ELHQ F++AVN L ++KAVPK+ILE M + G   ++R  VASHLQK+RL LKR       S   SQS   + TKR  N
Subjt:  AKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISLDVTKRRSN

Arabidopsis top hitse value%identityAlignment
AT2G01760.1 response regulator 143.3e-1348.86Show/hide
Query:  AKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISLDVTKRRSN
        +K++R +W+ ELHQ F++AVN L ++KAVPK+ILE M + G   ++R  VASHLQK+RL LKR       S   SQS   + TKR  N
Subjt:  AKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLPSQSISLDVTKRRSN

AT3G16857.1 response regulator 19.7e-1359.68Show/hide
Query:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        K+ R +W+ ELHQ F+ AVN L +EKAVPKKILE M + G   +TR  VASHLQKYR+ L+R
Subjt:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

AT3G16857.2 response regulator 19.7e-1359.68Show/hide
Query:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        K+ R +W+ ELHQ F+ AVN L +EKAVPKKILE M + G   +TR  VASHLQKYR+ L+R
Subjt:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

AT4G16110.1 response regulator 21.3e-1253.62Show/hide
Query:  KRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR
        K      K+ R +W+ ELHQ F+ AVN L ++KAVPKKILE M + G   +TR  VASHLQKYR+ L+R
Subjt:  KRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKR

AT5G58080.1 response regulator 181.6e-1250.68Show/hide
Query:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLP
        K+ R +W+ ELHQ F+ AV  L L+KAVPKKIL+ M    ++ +TR  VASHLQKYRL LK+  E  + +  P
Subjt:  KRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDKASKLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCCGAAAATTCAGCCGCCCCGACCGCCGGAGAATTGGGTGGTCCTTCCACCGCACACGGAGGAGAAATCAATTGTTTTGATCTAGAAGCTAATTTAGCGAAAAG
AAAAGAAATAGGAGCTAAAAGGACACGTTTCATTTGGACGGATGAACTCCACCAAATATTTATTGATGCTGTTAATAGTTTAACTCTAGAAAAAGCTGTTCCGAAGAAAA
TTTTAGAATATATGAGAATTTGTGGTGTTCAAAATATCACAAGAGCAATTGTTGCTAGTCACCTTCAGAAATATAGGTTGAATCTTAAAAGACATCTTGAGGTTGATAAA
GCATCAAAGTTACCTTCCCAATCAATCTCTCTCGATGTGACCAAAAGAAGATCAAATCAAGAAGAAGACATGAGAAAACAAATGTTGCAAGAAAATGTCATTTGTGAAAT
GAAACATCAACGGTGGCCTCTAATTGAATCTCTATTAGGACCGGGCATAAAGCTACACAACATGTTTTTTCCTCATTTATATAAGAAAAATCAACATATTCGTCTTCCAA
ATCTACCTAATTATCAATTCTCTAGATATGTTGATGAGAATAATAATAACAATGTTATTGTCCCTCTTATCAACGATAGATTGACCAATGATGTTTCAAATGATTGTCTC
CATCTCCAGATTTTGAGAGAATATCAAGAAGCTTACAAAGATTTCTATGATCATAGTATGCATATCAGACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGCCGAAAATTCAGCCGCCCCGACCGCCGGAGAATTGGGTGGTCCTTCCACCGCACACGGAGGAGAAATCAATTGTTTTGATCTAGAAGCTAATTTAGCGAAAAG
AAAAGAAATAGGAGCTAAAAGGACACGTTTCATTTGGACGGATGAACTCCACCAAATATTTATTGATGCTGTTAATAGTTTAACTCTAGAAAAAGCTGTTCCGAAGAAAA
TTTTAGAATATATGAGAATTTGTGGTGTTCAAAATATCACAAGAGCAATTGTTGCTAGTCACCTTCAGAAATATAGGTTGAATCTTAAAAGACATCTTGAGGTTGATAAA
GCATCAAAGTTACCTTCCCAATCAATCTCTCTCGATGTGACCAAAAGAAGATCAAATCAAGAAGAAGACATGAGAAAACAAATGTTGCAAGAAAATGTCATTTGTGAAAT
GAAACATCAACGGTGGCCTCTAATTGAATCTCTATTAGGACCGGGCATAAAGCTACACAACATGTTTTTTCCTCATTTATATAAGAAAAATCAACATATTCGTCTTCCAA
ATCTACCTAATTATCAATTCTCTAGATATGTTGATGAGAATAATAATAACAATGTTATTGTCCCTCTTATCAACGATAGATTGACCAATGATGTTTCAAATGATTGTCTC
CATCTCCAGATTTTGAGAGAATATCAAGAAGCTTACAAAGATTTCTATGATCATAGTATGCATATCAGACCCTAG
Protein sequenceShow/hide protein sequence
MIAENSAAPTAGELGGPSTAHGGEINCFDLEANLAKRKEIGAKRTRFIWTDELHQIFIDAVNSLTLEKAVPKKILEYMRICGVQNITRAIVASHLQKYRLNLKRHLEVDK
ASKLPSQSISLDVTKRRSNQEEDMRKQMLQENVICEMKHQRWPLIESLLGPGIKLHNMFFPHLYKKNQHIRLPNLPNYQFSRYVDENNNNNVIVPLINDRLTNDVSNDCL
HLQILREYQEAYKDFYDHSMHIRP