CuGenDBv2

Gene ID	HG10023076
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Thioredoxin domain-containing protein
Genome location	Chr05:30960443..30962625
RNA-Seq Expression	HG10023076
Synteny	HG10023076
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058568.1 uncharacterized protein E6C27_scaffold339G00350 [Cucumis melo var. makuwa]

1.4e-96

88.1

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        MNSA EAGRRLC+GFGDGRFYTN E+ KLFLVVVAALLAS VV+SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
        SYSSLKLMFMYRNSEKML NAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPE+LPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKG+VT
Subjt:  LSKGIKGNVT

XP_004136136.1 uncharacterized protein LOC101215020 isoform X1 [Cucumis sativus]

2.1e-97

88.1

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        MNSA EAGRRLC GFGDGRFYTN  +WKLFLVVVAALLAS VV SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
        SYSSLKLMFMYRNSEKML NAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPE+LPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKGN+T
Subjt:  LSKGIKGNVT

XP_008461377.1 PREDICTED: uncharacterized protein LOC103499975 isoform X1 [Cucumis melo]

1.4e-96

88.1

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        MNSA EAGRRLC+GFGDGRFYTN E+ KLFLVVVAALLAS VV+SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
        SYSSLKLMFMYRNSEKML NAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPE+LPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKG+VT
Subjt:  LSKGIKGNVT

XP_023548671.1 uncharacterized protein LOC111807261 [Cucurbita pepo subsp. pepo]

5.0e-91

84.76

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        MNSAAEA RR+C  FGDGRF  N E+ KLF VVVAALLA+FVV+SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
         YSSLKLMFMYRNSEKMLVNAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPEELPLTHLNTPE+LKSFLDSTDKALLL EFCGWT +L
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKGNVT
Subjt:  LSKGIKGNVT

XP_038897901.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120085786 [Benincasa hispida]

6.1e-97

88.21

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Query:  MNSAAEAGRRLCQ--GFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENR
        MNS AEAGRRLCQ  GFGDGRFYTN E+WKLFLVVVAALL S VV+SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENR
Subjt:  MNSAAEAGRRLCQ--GFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENR

Query:  KESYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTP
        KESYSSLKLMFMYRNSEKMLVNAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPE+LPLTHLNTPEDLKSFLDSTDKALLLVE CGWTP
Subjt:  KESYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTP

Query:  KLLSKGIKGNVT
        KLLSKGIKGNVT
Subjt:  KLLSKGIKGNVT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K871 Uncharacterized protein

1.0e-97

88.1

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        MNSA EAGRRLC GFGDGRFYTN  +WKLFLVVVAALLAS VV SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
        SYSSLKLMFMYRNSEKML NAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPE+LPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKGN+T
Subjt:  LSKGIKGNVT

A0A1S3CF03 uncharacterized protein LOC103499975 isoform X1

6.5e-97

88.1

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        MNSA EAGRRLC+GFGDGRFYTN E+ KLFLVVVAALLAS VV+SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
        SYSSLKLMFMYRNSEKML NAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPE+LPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKG+VT
Subjt:  LSKGIKGNVT

A0A5A7UTS6 Uncharacterized protein

6.5e-97

88.1

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        MNSA EAGRRLC+GFGDGRFYTN E+ KLFLVVVAALLAS VV+SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
        SYSSLKLMFMYRNSEKML NAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPE+LPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKG+VT
Subjt:  LSKGIKGNVT

A0A6J1GPN2 uncharacterized protein LOC111456351

4.5e-90

83.81

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        M+SAAEA RR+C  FGDGRF  N E+ KLF VVVAALLA+ VV+SNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
         YSSLKLMFMYRNSEKMLVNAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPEELPLTHLNTPE+LKSFLDSTDKALLL EFCGWT +L
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKGNVT
Subjt:  LSKGIKGNVT

A0A6J1JR67 uncharacterized protein LOC111488163

4.5e-90

83.81

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Query:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE
        MNSAAEA RR+C  FGDGRF  N E+ KLF VVVAALLA+ VV+SNASETIGEW ILTRQNFSSQIRLHPHILLLVTLP            +HLIENRKE
Subjt:  MNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKE

Query:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL
         YSSLKLMFMYRNSEKMLVNAIGATSEET+VIFYHHSVSYKYQGRLTAQNIVFSIYPY+SLLPEELPLTHLNTPE+LKSFLDSTDKALLL EFCGWT +L
Subjt:  SYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKL

Query:  LSKGIKGNVT
        LSKGIKGNVT
Subjt:  LSKGIKGNVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G19780.1 LOCATED IN: endomembrane system

4.1e-43

51.38

Show/hide

Query:  FLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKESYSSLKLMFMYRNSEKMLVNAIGATSEET
        FLV V+ +L         S   GEW+ILT QNFSSQIRLHPH+LL VT P            + +++ R+E +  LKLM +YRNSEK+L  AIGA     
Subjt:  FLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKESYSSLKLMFMYRNSEKMLVNAIGATSEET

Query:  DVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKLLSKGIKGNVT
         +++YH+SV Y Y G+L A NI+ SI+PY++  PEELPL HL +P+ LK FL S+DKALLL EFCGWT  L+S+ +K NVT
Subjt:  DVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKLLSKGIKGNVT

AT3G19780.2 LOCATED IN: endomembrane system

4.1e-43

51.38

Show/hide

Query:  FLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKESYSSLKLMFMYRNSEKMLVNAIGATSEET
        FLV V+ +L         S   GEW+ILT QNFSSQIRLHPH+LL VT P            + +++ R+E +  LKLM +YRNSEK+L  AIGA     
Subjt:  FLVVVAALLASFVVKSNASETIGEWQILTRQNFSSQIRLHPHILLLVTLP------------SHLIENRKESYSSLKLMFMYRNSEKMLVNAIGATSEET

Query:  DVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKLLSKGIKGNVT
         +++YH+SV Y Y G+L A NI+ SI+PY++  PEELPL HL +P+ LK FL S+DKALLL EFCGWT  L+S+ +K NVT
Subjt:  DVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLDSTDKALLLVEFCGWTPKLLSKGIKGNVT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCGGACCGTTACAAGACGATTACGAAATACTCGCCACTCGACCCATTTCTGATGTGGACATTTCATTTCACATCCTTTGAAATTGGGTCTCGAAAATTGAAAGTTGG
AGTCTCTGCAACTGGCTGCCACTGGACCATAGATGAAAGAATGAATTCAGCTGCTGAAGCTGGAAGACGACTGTGCCAGGGATTTGGTGATGGGCGGTTTTATACGAACG
GTGAGAGATGGAAGCTGTTTCTGGTGGTCGTGGCCGCACTTTTGGCATCCTTCGTTGTCAAATCTAATGCATCGGAGACAATTGGAGAATGGCAAATTCTTACCAGACAG
AATTTCTCTTCTCAGATCAGACTTCATCCGCATATTCTTCTTCTCGTCACACTGCCCTCCCATCTCATTGAAAATAGAAAAGAAAGCTATAGTTCATTAAAGCTGATGTT
CATGTACAGAAACTCGGAGAAGATGTTAGTGAATGCAATTGGTGCTACTTCAGAGGAGACAGATGTTATTTTCTACCATCATTCTGTATCTTACAAGTATCAAGGGAGAC
TAACAGCCCAAAATATTGTATTCTCAATTTATCCATACATATCACTATTGCCTGAAGAACTTCCCCTTACGCACTTGAATACCCCTGAGGACTTGAAGTCATTCCTTGAT
TCAACTGATAAGGCCTTGCTTCTCGTGGAATTTTGTGGATGGACTCCAAAATTGTTGTCCAAGGGGATAAAGGGCAATGTTACAGGTCTGTGA

mRNA sequence

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Protein sequence

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MSDRYKTITKYSPLDPFLMWTFHFTSFEIGSRKLKVGVSATGCHWTIDERMNSAAEAGRRLCQGFGDGRFYTNGERWKLFLVVVAALLASFVVKSNASETIGEWQILTRQ
NFSSQIRLHPHILLLVTLPSHLIENRKESYSSLKLMFMYRNSEKMLVNAIGATSEETDVIFYHHSVSYKYQGRLTAQNIVFSIYPYISLLPEELPLTHLNTPEDLKSFLD
STDKALLLVEFCGWTPKLLSKGIKGNVTGL

HG10023076 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome