; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10023100 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023100
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionStructural maintenance of chromosomes protein 5
Genome locationChr05:31183469..31186486
RNA-Seq ExpressionHG10023100
SyntenyHG10023100
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0007062 - sister chromatid cohesion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030915 - Smc5-Smc6 complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR027131 - Structural maintenance of chromosomes protein 5
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR038729 - Rad50/SbcC-type AAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014259.1 Structural maintenance of chromosomes protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-14296.36Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RG+DDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEE ITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAGIIQ FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHR LVEKSH IK+IERAVEKNGDTLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHFV
        LNVEQEKDVERVRQR+ELLKKV+SMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDH V
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHFV

TYK10389.1 structural maintenance of chromosomes protein 5 isoform X2 [Cucumis melo var. makuwa]1.1e-14197.41Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAG+IQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHRALV+KSHGIKSIERAVEKNG+TLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        LNVEQEKDVE VRQRDELLKKV+SMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

XP_004135946.1 structural maintenance of chromosomes protein 5 isoform X2 [Cucumis sativus]8.7e-14297.78Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHRALV+KSHGIKSIERAVEKNGDTLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        LNVEQEKDVE VRQRDELLKKV+SMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLK+PIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

XP_008461344.1 PREDICTED: structural maintenance of chromosomes protein 5 isoform X2 [Cucumis melo]1.1e-14197.41Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAG+IQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHRALV+KSHGIKSIERAVEKNG+TLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        LNVEQEKDVE VRQRDELLKKV+SMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

XP_031744571.1 structural maintenance of chromosomes protein 5 isoform X1 [Cucumis sativus]3.9e-14297.42Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHRALV+KSHGIKSIERAVEKNGDTLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEY
        LNVEQEKDVE VRQRDELLKKV+SMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLK+PIE+
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEY

TrEMBL top hitse value%identityAlignment
A0A0A0K5Z4 Structural maintenance of chromosomes protein 54.2e-14297.78Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHRALV+KSHGIKSIERAVEKNGDTLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        LNVEQEKDVE VRQRDELLKKV+SMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLK+PIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

A0A1S3CE57 Structural maintenance of chromosomes protein 55.5e-14297.41Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAG+IQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHRALV+KSHGIKSIERAVEKNG+TLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        LNVEQEKDVE VRQRDELLKKV+SMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

A0A5A7UYJ7 Structural maintenance of chromosomes protein 55.5e-14297.41Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAG+IQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHRALV+KSHGIKSIERAVEKNG+TLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        LNVEQEKDVE VRQRDELLKKV+SMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

A0A5D3CJK5 Structural maintenance of chromosomes protein 55.5e-14297.41Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAG+IQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHRALV+KSHGIKSIERAVEKNG+TLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        LNVEQEKDVE VRQRDELLKKV+SMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

A0A6J1GRQ5 Structural maintenance of chromosomes protein 54.0e-14096.67Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RG+DDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEE ITITRKM
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DTHNKSEWLFNGKVVPKKDVAGIIQ FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL ILHR LVEKSH IK+IERAVEKNGDTLDQLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        LNVEQEKDVERVRQR+ELLKKV+SMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

SwissProt top hitse value%identityAlignment
Q5ZJY5 Structural maintenance of chromosomes protein 52.4e-4136.8Show/hide
Query:  GEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMD
        G+   + GSI+ I + NF+T++  + +PG  LN++IG NG+GKSSIVCAI LGL G+P  LGRA  VG +VK+G   G V I L      E I ITR++ 
Subjt:  GEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMD

Query:  -THNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
           N S W  N K+   K V   +   NIQV+NL QFLPQD+V EFA+++ ++LLE TEK++G P++   H  L       + +E   +   ++L+++K 
Subjt:  -THNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPI
             ++DV+R  +    L  +  +++K PW++Y+  + ++ +VK++  +AK++L      L +++ P+
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPI

Q802R9 Structural maintenance of chromosomes protein 51.1e-4139.2Show/hide
Query:  MPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDT-HNK
        M GSI+ I + NF+T+++ +  PG  LN+++G NG+GKSSIVCAI LGL G+  +LGR   VG YVKRG + G + I L  +     + ITR++   +N+
Subjt:  MPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDT-HNK

Query:  SEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKALNVEQ
        S W+ NGK   +K V   ++   IQV+NL QFLPQ++V EFAK++  +LLE TEK+VG P++   H  L       + +E  V +    +++ K  N   
Subjt:  SEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKALNVEQ

Query:  EKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKL
        + DV R  ++   L  ++ ++KK PW++Y+  + E   VK + +EAK+ L
Subjt:  EKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKL

Q8CG46 Structural maintenance of chromosomes protein 54.3e-4341Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        R    ++ GSI+ I + NF+T++  +  PG  LN++IG NG+GKSSIVCAI LGL G+P  +GRA  VG +VKRG   G V I L   +    + ITR++
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DT-HNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLK
        D   N+S W  N K V +K V   +   NIQV NL QFLPQD+V EFAKL+ ++LLE TEK+VG P++   H  L       K +E + ++  + L+++ 
Subjt:  DT-HNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLK

Query:  ALNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVK---EKEKEAKKKLDE
          N   ++DVER  +R   L  ++ ++ K PW++Y+  + EY  VK   ++ KE  +KL E
Subjt:  ALNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVK---EKEKEAKKKLDE

Q8IY18 Structural maintenance of chromosomes protein 53.3e-4340.93Show/hide
Query:  YMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITL---RGNTKEEKITITRKMD-
        ++ GSI+ I + NF+T++  +  PG  LN+++G NG+GKSSIVCAI LGL G+P  +GRA  VG +VKRG   G V I L    GN     + ITR++D 
Subjt:  YMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITL---RGNTKEEKITITRKMD-

Query:  THNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKAL
          N+S W  N K   +K V   +   NIQV NL QFLPQD+V EFAKL+ ++LLE TEK++G P++   H  L       K +E + ++  + L ++   
Subjt:  THNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKAL

Query:  NVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVK---EKEKEAKKKLDE
        N   ++DVER  +R   L  ++ ++ K PW++Y+  + EY EVK   ++ KE  +KL E
Subjt:  NVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVK---EKEKEAKKKLDE

Q9LFS8 Structural maintenance of chromosomes protein 51.7e-11981.11Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDD++PG+IIEIELHNFMTFNHL CKPGSRLNLVIGPNGSGKSS+VCAIAL LGGEPQLLGRATSVGAYVKRGE+SGYV+I+LRGNT+EE +TI RK+
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DT NKSEW+FNG  V KKD+  IIQ+FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL + HRALVEKS  +K +ERAV KNG+TL+QLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        L  EQEKDVERVRQR+  L KV SMKKKLPWLKYDMKKAEYM+ K++ KEA+KKLDEAA  LN +KEPIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

Arabidopsis top hitse value%identityAlignment
AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein7.9e-0825Show/hide
Query:  GSIIEIELHNFMTF-NHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEP-QLLGRATS--VGAYVKRGEE----SGYVRITLRGNTKEEKITITRKM
        G I+++E+ NF ++  H    P      +IGPNGSGKS+++ AI+  LG    QL G      + A+  R +E      +VR+  + +   E +  TR +
Subjt:  GSIIEIELHNFMTF-NHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEP-QLLGRATS--VGAYVKRGEE----SGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
         +   SE+  + +VV   +  G ++   I V      + Q  V   A   P +L    E+  G  +L   +  L EK    +     + +   T+   K 
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKY----DMKKAE-------------YMEVKEKEKEAKKKLDEAANTLNDLKE
        L   Q+++ E+  +  E LK +K  +++  W  Y    D++KA                E+++ E+EA K+  E A  L ++ +
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKY----DMKKAE-------------YMEVKEKEKEAKKKLDEAANTLNDLKE

AT3G54670.3 Structural maintenance of chromosomes (SMC) family protein7.9e-0825Show/hide
Query:  GSIIEIELHNFMTF-NHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEP-QLLGRATS--VGAYVKRGEE----SGYVRITLRGNTKEEKITITRKM
        G I+++E+ NF ++  H    P      +IGPNGSGKS+++ AI+  LG    QL G      + A+  R +E      +VR+  + +   E +  TR +
Subjt:  GSIIEIELHNFMTF-NHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEP-QLLGRATS--VGAYVKRGEE----SGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
         +   SE+  + +VV   +  G ++   I V      + Q  V   A   P +L    E+  G  +L   +  L EK    +     + +   T+   K 
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKY----DMKKAE-------------YMEVKEKEKEAKKKLDEAANTLNDLKE
        L   Q+++ E+  +  E LK +K  +++  W  Y    D++KA                E+++ E+EA K+  E A  L ++ +
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKY----DMKKAE-------------YMEVKEKEKEAKKKLDEAANTLNDLKE

AT5G07660.1 structural maintenance of chromosomes 6A6.5e-1024.2Show/hide
Query:  GSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKE--------EKITITRKM
        G I+ I L NFM  ++L+ + G  +N + G NGSGKS+I+ A+ +  G   +   RA ++  ++K G     V + L+   ++        + + I R++
Subjt:  GSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKE--------EKITITRKM

Query:  DTHNKSEWL--FNGKVVP--KKDVAGIIQRFNIQVNNLTQFLPQDRVCEFA-------------KLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKS
                L    G+ +   K+++  +++ +NI V N    + QD+  EF              K T +Q +++  +++G  +L+  +  L E    IK 
Subjt:  DTHNKSEWL--FNGKVVP--KKDVAGIIQRFNIQVNNLTQFLPQDRVCEFA-------------KLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKS

Query:  IERAVEKNGDTLDQLKALNVEQEKDVERVRQRDELLKKVKSMKKKLPW-LKYDMKKAEYMEVKEKEKEAKKKLDEAANTLN
        IE+ + +            +E+ K++E V   +E+ ++V  +KKKL W   YD+ + +  E  EK  + K+++    N ++
Subjt:  IERAVEKNGDTLDQLKALNVEQEKDVERVRQRDELLKKVKSMKKKLPW-LKYDMKKAEYMEVKEKEKEAKKKLDEAANTLN

AT5G15920.1 structural maintenance of chromosomes 51.2e-12081.11Show/hide
Query:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM
        RGEDD++PG+IIEIELHNFMTFNHL CKPGSRLNLVIGPNGSGKSS+VCAIAL LGGEPQLLGRATSVGAYVKRGE+SGYV+I+LRGNT+EE +TI RK+
Subjt:  RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA
        DT NKSEW+FNG  V KKD+  IIQ+FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL + HRALVEKS  +K +ERAV KNG+TL+QLKA
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        L  EQEKDVERVRQR+  L KV SMKKKLPWLKYDMKKAEYM+ K++ KEA+KKLDEAA  LN +KEPIE
Subjt:  LNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

AT5G61460.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein7.2e-0922.78Show/hide
Query:  GSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEE--------KITITRKM
        GSI+ I++ NFM  ++L+ + G  +N + G NGSGKS+I+ A+ +  G   +   RA ++  ++K G     V++ ++ + ++          I I R++
Subjt:  GSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEE--------KITITRKM

Query:  DTHNKSEWL--FNGKVVPKK--DVAGIIQRFNIQVNNLTQFLPQDRVCEFAKL-TPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTL
             +  L  + GK V  K  ++  +++ FNI V N    + QD+  EF          +   KA    Q++ L +++ E    +      V++  +T+
Subjt:  DTHNKSEWL--FNGKVVPKK--DVAGIIQRFNIQVNNLTQFLPQDRVCEFAKL-TPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTL

Query:  DQLKALNVEQEKDVERVRQRDELLKKVKSMKKKLPW-LKYDMKK------AEYMEVKEKEKEAKKKLDEAANTLNDLKEPI
          ++    E    ++ + Q +E+ ++++ +KKKL W   YD+ +       + +++KE+    + K+D     +  L++ +
Subjt:  DQLKALNVEQEKDVERVRQRDELLKKVKSMKKKLPW-LKYDMKK------AEYMEVKEKEKEAKKKLDEAANTLNDLKEPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACCAATGAAAGTTTAACTCTTAAAGAAGCAGGAAGCACTTCAAGAAGTCATTCAGAAGTCATTCTGAATTTGATTGATTTGGTTATTTCCTTATTACATGCAGA
GGGGAAGCTTGAAGAGGTTTCTCTCCTAGTTAGAAGGCTGGAAACACCATTTCTCATTCAATTTCCATGTGCTAAGCGTGTCACTAGCTTTCATCCTGAGCCACTCGAAC
ACGTTAGCTTTAGGGGGGAAGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTTAACCACTTGAAATGTAAACCAGGATCACGTCTA
AACCTTGTAATTGGGCCTAACGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTCAGCTCCTTGGAAGGGCAACCAGTGTTGGAGC
ATACGTGAAGCGTGGGGAGGAGTCCGGTTATGTAAGAATAACCTTGAGAGGGAATACTAAAGAGGAAAAGATTACAATTACACGTAAAATGGACACACATAACAAATCTG
AGTGGTTGTTCAATGGAAAAGTTGTGCCAAAAAAAGATGTAGCTGGAATCATTCAAAGGTTTAACATTCAAGTTAATAATTTGACTCAATTTTTACCTCAGGACAGGGTT
TGTGAGTTTGCCAAATTAACTCCTGTGCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGTGATCCTCAACTTTCTATCCTACATCGTGCACTTGTTGAGAAAAGCCATGG
CATAAAAAGTATAGAAAGAGCTGTTGAGAAGAATGGTGACACCCTAGATCAGTTGAAGGCATTAAATGTCGAGCAAGAGAAAGATGTTGAGCGTGTTCGTCAAAGAGATG
AACTTTTAAAAAAGGTTAAGTCCATGAAAAAGAAACTGCCATGGCTAAAGTATGACATGAAAAAGGCTGAATACATGGAAGTTAAGGAAAAGGAAAAGGAGGCCAAAAAG
AAGTTAGATGAAGCTGCTAACACTTTGAATGATTTAAAGGAGCCAATTGAGTATGATCACTTCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACACCAATGAAAGTTTAACTCTTAAAGAAGCAGGAAGCACTTCAAGAAGTCATTCAGAAGTCATTCTGAATTTGATTGATTTGGTTATTTCCTTATTACATGCAGA
GGGGAAGCTTGAAGAGGTTTCTCTCCTAGTTAGAAGGCTGGAAACACCATTTCTCATTCAATTTCCATGTGCTAAGCGTGTCACTAGCTTTCATCCTGAGCCACTCGAAC
ACGTTAGCTTTAGGGGGGAAGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTTAACCACTTGAAATGTAAACCAGGATCACGTCTA
AACCTTGTAATTGGGCCTAACGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTCAGCTCCTTGGAAGGGCAACCAGTGTTGGAGC
ATACGTGAAGCGTGGGGAGGAGTCCGGTTATGTAAGAATAACCTTGAGAGGGAATACTAAAGAGGAAAAGATTACAATTACACGTAAAATGGACACACATAACAAATCTG
AGTGGTTGTTCAATGGAAAAGTTGTGCCAAAAAAAGATGTAGCTGGAATCATTCAAAGGTTTAACATTCAAGTTAATAATTTGACTCAATTTTTACCTCAGGACAGGGTT
TGTGAGTTTGCCAAATTAACTCCTGTGCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGTGATCCTCAACTTTCTATCCTACATCGTGCACTTGTTGAGAAAAGCCATGG
CATAAAAAGTATAGAAAGAGCTGTTGAGAAGAATGGTGACACCCTAGATCAGTTGAAGGCATTAAATGTCGAGCAAGAGAAAGATGTTGAGCGTGTTCGTCAAAGAGATG
AACTTTTAAAAAAGGTTAAGTCCATGAAAAAGAAACTGCCATGGCTAAAGTATGACATGAAAAAGGCTGAATACATGGAAGTTAAGGAAAAGGAAAAGGAGGCCAAAAAG
AAGTTAGATGAAGCTGCTAACACTTTGAATGATTTAAAGGAGCCAATTGAGTATGATCACTTCGTTTAA
Protein sequenceShow/hide protein sequence
MDTNESLTLKEAGSTSRSHSEVILNLIDLVISLLHAEGKLEEVSLLVRRLETPFLIQFPCAKRVTSFHPEPLEHVSFRGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRL
NLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRV
CEFAKLTPVQLLEETEKAVGDPQLSILHRALVEKSHGIKSIERAVEKNGDTLDQLKALNVEQEKDVERVRQRDELLKKVKSMKKKLPWLKYDMKKAEYMEVKEKEKEAKK
KLDEAANTLNDLKEPIEYDHFV