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HG10023155 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023155
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHMG box domain-containing protein
Genome locationChr05:31655284..31655478
RNA-Seq ExpressionHG10023155
SyntenyHG10023155
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646409.1 hypothetical protein Csa_016523 [Cucumis sativus]7.1e-1882.35Show/hide
Query:  MLSSVLVSSLLGCFLPSQSPKVS-DEEQHSNSKLKQQKPKSDSS---QSPKAPIIVSYFPVSANLSRL
        MLSSVLVS+LLGCF+PS+SPKVS +E+QHSNSKLKQQKPKSDSS   QSPKAPI++SYFPVS+NLSRL
Subjt:  MLSSVLVSSLLGCFLPSQSPKVS-DEEQHSNSKLKQQKPKSDSS---QSPKAPIIVSYFPVSANLSRL

XP_009151594.1 uncharacterized protein LOC103874892 [Brassica rapa]9.0e-0549.15Show/hide
Query:  LVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL
        L++S  GCF+P    K+S  +  ++  +  +KPKS  S+SP+AP+IVSYFPV +NLSRL
Subjt:  LVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL

XP_013591373.1 PREDICTED: uncharacterized protein LOC106299904 [Brassica oleracea var. oleracea]8.2e-0656.67Show/hide
Query:  LVSSLLGCFLPSQSPKVSDEEQHSNSK-LKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL
        L++S  GCF+P    K+S  +  SNSK L  +KPKS  S+SP+AP+IVSYFPV +NLSRL
Subjt:  LVSSLLGCFLPSQSPKVSDEEQHSNSK-LKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL

XP_018469213.1 PREDICTED: uncharacterized protein LOC108840909 [Raphanus sativus]9.0e-0556.9Show/hide
Query:  LVSSLLGCFLPSQSPKVSDEEQHSNSK-LKQQKPKSDSSQSPKAPIIVSYFPVSANLS
        L SS  GCF+P+   K+S  +  SNSK L  +KPKS  S+SP+AP+IVSYFPV +NLS
Subjt:  LVSSLLGCFLPSQSPKVSDEEQHSNSK-LKQQKPKSDSSQSPKAPIIVSYFPVSANLS

XP_038899513.1 uncharacterized protein LOC120086791 [Benincasa hispida]4.1e-1371.88Show/hide
Query:  MLSSVLVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL
        M SS+  S LLGCFLPSQSPKVS  E++SN K+K +KPKS+SS+S KAPIIVSYFPVS+N SRL
Subjt:  MLSSVLVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL

TrEMBL top hitse value%identityAlignment
A0A0A0K638 Uncharacterized protein4.7e-1576.47Show/hide
Query:  MLSSVLVSSLLGCFLPSQSPKVS-DEEQHSNSKLKQQKPKSDSS---QSPKAPIIVSYFPVSANLSRL
        M SS  VS+L GCFLPS+S KVS +E+QHSNSKLKQQKPKSDSS   QSPKAPI++SYFPVS+NLSRL
Subjt:  MLSSVLVSSLLGCFLPSQSPKVS-DEEQHSNSKLKQQKPKSDSS---QSPKAPIIVSYFPVSANLSRL

A0A398AHS5 Uncharacterized protein4.4e-0549.15Show/hide
Query:  LVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL
        L++S  GCF+P    K+S  +  ++  +  +KPKS  S+SP+AP+IVSYFPV +NLSRL
Subjt:  LVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL

A0A3P6FFT4 Uncharacterized protein4.0e-0656.67Show/hide
Query:  LVSSLLGCFLPSQSPKVSDEEQHSNSK-LKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL
        L++S  GCF+P    K+S  +  SNSK L  +KPKS  S+SP+AP+IVSYFPV +NLSRL
Subjt:  LVSSLLGCFLPSQSPKVSDEEQHSNSK-LKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL

A0A6J0MB66 uncharacterized protein LOC1088409094.4e-0556.9Show/hide
Query:  LVSSLLGCFLPSQSPKVSDEEQHSNSK-LKQQKPKSDSSQSPKAPIIVSYFPVSANLS
        L SS  GCF+P+   K+S  +  SNSK L  +KPKS  S+SP+AP+IVSYFPV +NLS
Subjt:  LVSSLLGCFLPSQSPKVSDEEQHSNSK-LKQQKPKSDSSQSPKAPIIVSYFPVSANLS

M4D568 Uncharacterized protein4.4e-0549.15Show/hide
Query:  LVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL
        L++S  GCF+P    K+S  +  ++  +  +KPKS  S+SP+AP+IVSYFPV +NLSRL
Subjt:  LVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCTTCTGTCTTAGTTTCATCCCTGTTGGGTTGTTTCCTTCCTTCTCAATCTCCAAAGGTTTCTGATGAAGAACAACATTCAAACTCAAAACTCAAACAACAGAA
ACCAAAATCAGATTCATCACAGTCTCCTAAAGCTCCAATAATCGTCTCTTATTTCCCTGTTTCTGCAAATTTGTCTCGCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCTTCTGTCTTAGTTTCATCCCTGTTGGGTTGTTTCCTTCCTTCTCAATCTCCAAAGGTTTCTGATGAAGAACAACATTCAAACTCAAAACTCAAACAACAGAA
ACCAAAATCAGATTCATCACAGTCTCCTAAAGCTCCAATAATCGTCTCTTATTTCCCTGTTTCTGCAAATTTGTCTCGCTTGTGA
Protein sequenceShow/hide protein sequence
MLSSVLVSSLLGCFLPSQSPKVSDEEQHSNSKLKQQKPKSDSSQSPKAPIIVSYFPVSANLSRL