; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10023171 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023171
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationChr05:31861922..31863760
RNA-Seq ExpressionHG10023171
SyntenyHG10023171
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575660.1 hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sororia]6.2e-4582.95Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG
        MASIFAAPPS+LNLTSRPSLI  AVLPSSIAGIQ+HSN  P PSFR   YRN++GLELRQRSFSITASNSSD NSIKEENGSSKA+SDA+GPPFLTILAG
Subjt:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG

Query:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK
        IFVFSL+LW+ SSA  S+IGLVVKL STK
Subjt:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK

XP_022953425.1 uncharacterized protein LOC111455984 [Cucurbita moschata]1.6e-4582.95Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG
        MASIF+APPS+LNLTSRPSLI  AVLPSSIAGIQ+HSN  P PSFR   YRN++GLELRQRSFSITASNSSDGNSIKEENGSSKA+SDA+GPPFLTILAG
Subjt:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG

Query:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK
        IFVFSL+LW+ SSA  S+IGLVVKL STK
Subjt:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK

XP_022991945.1 uncharacterized protein LOC111488436 [Cucurbita maxima]2.6e-4381.25Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG
        MASIFAAPPS+LNLTSRPSLI  AVLPSSIAGIQ+HSN  P PSFR   YRN++GLEL  RSFSITASNSSDGNSI+EENGSSKA+SDA+GPPFLTILAG
Subjt:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG

Query:  IFVFSLVLWIFSSAIASVIGLVVKLFST
        IFVFSL+LW+ SSA  S+IGLVVKL ST
Subjt:  IFVFSLVLWIFSSAIASVIGLVVKLFST

XP_023547947.1 uncharacterized protein LOC111806743 [Cucurbita pepo subsp. pepo]1.2e-4381.4Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG
        MASIFAAPPS+LNLTSRPSLI  AVLPSS AGIQ+HSN  P PSF   SYRN++GLELRQRSFSITASNSSD NSIKEENGSSKA+ DA+GPPFLTILAG
Subjt:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG

Query:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK
        IFVFSL+LW+ SSA  S+IGLVVKL STK
Subjt:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK

XP_038899532.1 uncharacterized protein LOC120086813 isoform X1 [Benincasa hispida]3.6e-4582.95Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG
        MASIFAAP  +LNLTSRPSLI RA LPSSI  IQFHSN SPFPSFR   YRN+RGLELRQRSFSITASNSSDGNSIKEENGSSKA++DA+GPPFLTILAG
Subjt:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG

Query:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK
        IFVFSLVLWIFSS + S + LVVKL STK
Subjt:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK

TrEMBL top hitse value%identityAlignment
A0A0A0K9W1 Uncharacterized protein1.8e-3775.38Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATS-DAEGPPFLTILA
        MAS+FAAPPSQLNLTSR S I RA LPS IA IQFHSN SPFPSFRY   +N  GLELRQR  SI AS S+DGNSIKEEN SSKA+S DA+GPPFLTILA
Subjt:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATS-DAEGPPFLTILA

Query:  GIFVFSLVLWIFSSAIASVIGLVVKLFSTK
        G FV SL+LWIFSSA+ S++GLVVKL S K
Subjt:  GIFVFSLVLWIFSSAIASVIGLVVKLFSTK

A0A6J1GPL5 uncharacterized protein LOC1114559847.9e-4682.95Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG
        MASIF+APPS+LNLTSRPSLI  AVLPSSIAGIQ+HSN  P PSFR   YRN++GLELRQRSFSITASNSSDGNSIKEENGSSKA+SDA+GPPFLTILAG
Subjt:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG

Query:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK
        IFVFSL+LW+ SSA  S+IGLVVKL STK
Subjt:  IFVFSLVLWIFSSAIASVIGLVVKLFSTK

A0A6J1H506 uncharacterized protein LOC1114606321.8e-3469.23Show/hide
Query:  MASIFAAPPSQLNLTS-RPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILA
        MAS+FAAPPSQL L+S RPSL  +A LP SI G++FH N  P PSFR   Y+N++GL+LRQRSFSITASNSSDGNS KE+N  SK T DA+GPPFLTILA
Subjt:  MASIFAAPPSQLNLTS-RPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILA

Query:  GIFVFSLVLWIFSSAIASVIGLVVKLFSTK
        G FVFSLVLWI SS++ ++I L VKL STK
Subjt:  GIFVFSLVLWIFSSAIASVIGLVVKLFSTK

A0A6J1JUC2 uncharacterized protein LOC1114884361.3e-4381.25Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG
        MASIFAAPPS+LNLTSRPSLI  AVLPSSIAGIQ+HSN  P PSFR   YRN++GLEL  RSFSITASNSSDGNSI+EENGSSKA+SDA+GPPFLTILAG
Subjt:  MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAG

Query:  IFVFSLVLWIFSSAIASVIGLVVKLFST
        IFVFSL+LW+ SSA  S+IGLVVKL ST
Subjt:  IFVFSLVLWIFSSAIASVIGLVVKLFST

A0A6J1KVQ7 uncharacterized protein LOC1114980252.2e-3570.77Show/hide
Query:  MASIFAAPPSQLNLTS-RPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILA
        MAS+FAAPPSQL L+S RPSL  +A LP SI G++FH N  P PSFR   Y+N++GL+LRQRSFSITASNSSDGNS KEEN  SK T DA+GPPFLTILA
Subjt:  MASIFAAPPSQLNLTS-RPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILA

Query:  GIFVFSLVLWIFSSAIASVIGLVVKLFSTK
        G FVFSLVLWI SS++ ++I LVVKL STK
Subjt:  GIFVFSLVLWIFSSAIASVIGLVVKLFSTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCCGAGTTTGATTCCCAGAGCCGTTCTTCCCTCCTCCATCGCCGGCATTCAATTTCACTC
GAACACCTCTCCATTTCCTTCTTTCAGGTATTCGTCGTATAGGAACAGCAGAGGATTGGAATTAAGGCAAAGATCCTTTTCTATAACAGCCTCAAATTCCTCAGATGGGA
ATTCCATCAAGGAGGAAAATGGTTCGAGTAAAGCAACAAGTGATGCCGAAGGTCCTCCATTTCTTACCATTTTGGCTGGAATTTTTGTCTTTTCCCTTGTACTCTGGATA
TTCAGTTCTGCTATCGCGTCAGTTATAGGTCTAGTCGTCAAGCTGTTCTCAACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCCGAGTTTGATTCCCAGAGCCGTTCTTCCCTCCTCCATCGCCGGCATTCAATTTCACTC
GAACACCTCTCCATTTCCTTCTTTCAGGTATTCGTCGTATAGGAACAGCAGAGGATTGGAATTAAGGCAAAGATCCTTTTCTATAACAGCCTCAAATTCCTCAGATGGGA
ATTCCATCAAGGAGGAAAATGGTTCGAGTAAAGCAACAAGTGATGCCGAAGGTCCTCCATTTCTTACCATTTTGGCTGGAATTTTTGTCTTTTCCCTTGTACTCTGGATA
TTCAGTTCTGCTATCGCGTCAGTTATAGGTCTAGTCGTCAAGCTGTTCTCAACAAAGTAG
Protein sequenceShow/hide protein sequence
MASIFAAPPSQLNLTSRPSLIPRAVLPSSIAGIQFHSNTSPFPSFRYSSYRNSRGLELRQRSFSITASNSSDGNSIKEENGSSKATSDAEGPPFLTILAGIFVFSLVLWI
FSSAIASVIGLVVKLFSTK