; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10023174 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023174
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationChr05:31883443..31883730
RNA-Seq ExpressionHG10023174
SyntenyHG10023174
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575656.1 hypothetical protein SDJN03_26295, partial [Cucurbita argyrosperma subsp. sororia]7.8e-2172.04Show/hide
Query:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS
        MM+EI HLE   GM  TAAVF+LVQILVYLILSKSS VFSKN  RSLSFRQVRSL+IRRI+ ALSDFPS   G+  P  SRGEC   FDE SS
Subjt:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS

XP_022954080.1 uncharacterized protein LOC111456452 [Cucurbita moschata]1.6e-2174.19Show/hide
Query:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS
        MM+EI HLE   GM  TAAVF+LVQILVYLILSKSS VFSKN  RSLSFRQVRSLSIRRI+ ALSDFPS TG    P  SRGEC   FDE SS
Subjt:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS

XP_022991948.1 uncharacterized protein LOC111488440 [Cucurbita maxima]1.1e-1772.94Show/hide
Query:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECE
        MM+EI HLE   GM  TAAVF+LVQILVYLILSKSS VFSKN  RSLSFRQVRSLSIRRI+ ALSDFPS  G    P  SRG  E
Subjt:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECE

XP_023548863.1 uncharacterized protein LOC111807384 [Cucurbita pepo subsp. pepo]3.5e-2173.12Show/hide
Query:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS
        MM+EI HLE   GM  TAAVF+LVQILVYLILSKSS VFSKN  RSLSFRQVRSL+IRRI+ ALSDFPS TG    P  SRGEC   FDE SS
Subjt:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS

XP_038898457.1 uncharacterized protein LOC120086089 [Benincasa hispida]3.4e-1668.09Show/hide
Query:  MMMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS
        MMM+EISH +GM+   ATAAVFILVQILVYLILSKSSQVFSK  NRSLSFRQV+SLS  RII+ LSDFPSS+             E TFDE SS
Subjt:  MMMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS

TrEMBL top hitse value%identityAlignment
A0A660KP35 Uncharacterized protein7.9e-1158.02Show/hide
Query:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSR
        M++EIS L     M    A+F+LVQ+LVYLILS SS +FSKNA RSLSFR  RS+SI R++  LSD P+  GGE SP+ SR
Subjt:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSR

A0A6J0PQA3 uncharacterized protein LOC1095065092.0e-0967.74Show/hide
Query:  AVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLS
        A+F+LVQ LVYLILSKSS +FS    RSLSFR VRS+SIRR++ ALSD P   GGE SPS S
Subjt:  AVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLS

A0A6J1D0M4 uncharacterized protein LOC1110162091.4e-1563.37Show/hide
Query:  MMMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSR-------GECEMTFDEDS
        MM +EI  LEG++   ATAAVF LVQILVYLILSKSS VFSKN  RSLSFR VRSLSIRRI+ ALSD PS  GGE SP           GEC   F + S
Subjt:  MMMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSR-------GECEMTFDEDS

Query:  S
        S
Subjt:  S

A0A6J1GRF7 uncharacterized protein LOC1114564527.6e-2274.19Show/hide
Query:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS
        MM+EI HLE   GM  TAAVF+LVQILVYLILSKSS VFSKN  RSLSFRQVRSLSIRRI+ ALSDFPS TG    P  SRGEC   FDE SS
Subjt:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS

A0A6J1JXQ0 uncharacterized protein LOC1114884405.1e-1872.94Show/hide
Query:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECE
        MM+EI HLE   GM  TAAVF+LVQILVYLILSKSS VFSKN  RSLSFRQVRSLSIRRI+ ALSDFPS  G    P  SRG  E
Subjt:  MMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05575.1 unknown protein1.7e-1057.35Show/hide
Query:  GMQATAAVFILVQILVYLILSKSSQVF--SKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPS
        GM    ++F L+Q LVYLILSKSS VF  SK   R+ SFR  RS+SIRRI+  L D P+  GGE SPS
Subjt:  GMQATAAVFILVQILVYLILSKSSQVF--SKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPS

AT2G31945.1 unknown protein7.3e-0951.16Show/hide
Query:  LEGMLG-MQATAAVFILVQILVYLILSKSSQVF--SKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDE
        ++G LG M    A+F LVQ LVYLIL KSS+VF  S +  R+ SFR +RS+SIRRI+ AL D P+  G + SPS S G    + DE
Subjt:  LEGMLG-MQATAAVFILVQILVYLILSKSSQVF--SKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGGTGGAGATTAGCCATTTGGAAGGAATGCTAGGAATGCAAGCGACTGCTGCCGTGTTTATCCTCGTGCAGATTCTAGTTTATCTAATCCTCTCTAAATC
TTCTCAAGTCTTCTCTAAGAATGCGAACAGGTCTCTCAGTTTTCGACAGGTCCGATCTCTGAGTATTCGTCGGATTATTGAAGCTCTCTCTGACTTTCCCTCTAGCACCG
GTGGCGAGGCGTCTCCTTCTCTAAGTCGTGGAGAATGTGAAATGACATTCGATGAAGACAGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGATGGTGGAGATTAGCCATTTGGAAGGAATGCTAGGAATGCAAGCGACTGCTGCCGTGTTTATCCTCGTGCAGATTCTAGTTTATCTAATCCTCTCTAAATC
TTCTCAAGTCTTCTCTAAGAATGCGAACAGGTCTCTCAGTTTTCGACAGGTCCGATCTCTGAGTATTCGTCGGATTATTGAAGCTCTCTCTGACTTTCCCTCTAGCACCG
GTGGCGAGGCGTCTCCTTCTCTAAGTCGTGGAGAATGTGAAATGACATTCGATGAAGACAGTTCTTGA
Protein sequenceShow/hide protein sequence
MMMMVEISHLEGMLGMQATAAVFILVQILVYLILSKSSQVFSKNANRSLSFRQVRSLSIRRIIEALSDFPSSTGGEASPSLSRGECEMTFDEDSS