; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10023192 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023192
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNuclear pore complex protein
Genome locationChr05:32044084..32045799
RNA-Seq ExpressionHG10023192
SyntenyHG10023192
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575646.1 hypothetical protein SDJN03_26285, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4993.46Show/hide
Query:  KRRSRSNTKVKHRFMELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAAS
        K RSRS TKVKHRFMELWHKMIFPVRRVWL VSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV H+PKRK RPFWRVSVWSN AAAAS
Subjt:  KRRSRSNTKVKHRFMELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAAS

Query:  SYTATHA
        SYTATHA
Subjt:  SYTATHA
KAG7014198.1 hypothetical protein SDJN02_24373, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4993.46Show/hide
Query:  KRRSRSNTKVKHRFMELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAAS
        K RSRS TKVKHRFMELWHKMIFPVRRVWL VSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV H+PKRK RPFWRVSVWSN AAAAS
Subjt:  KRRSRSNTKVKHRFMELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAAS

Query:  SYTATHA
        SYTATHA
Subjt:  SYTATHA
KGN45194.1 hypothetical protein Csa_015637 [Cucumis sativus]3.3e-4496.77Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
        MELWHKMIFPVRRVWLAVSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV HQPKRKQRPFWRVSVWSN AAAASSYTATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
XP_022143553.1 uncharacterized protein LOC111013423 [Momordica charantia]2.0e-4496.77Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
        MELWHKMIFPVRRVWLAVSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSN AAAASS+TATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
XP_038900267.1 uncharacterized protein LOC120087349 [Benincasa hispida]3.0e-4598.92Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
        MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSN AAAASSYTATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
TrEMBL top hitse value%identityAlignment
A0A0A0K8I7 Uncharacterized protein1.6e-4496.77Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
        MELWHKMIFPVRRVWLAVSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV HQPKRKQRPFWRVSVWSN AAAASSYTATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
A0A1S4E346 uncharacterized protein LOC1079917963.6e-4495.7Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
        MELWHKMIFPVRRVWLAVS+RVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV HQPKRKQRPFWRVSVWSN AAAASSYTATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
A0A5A7UWX2 Uncharacterized protein1.5e-4292.71Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQ---AAAASSYTATHA
        MELWHKMIFPVRRVWLAVS+RVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV HQPKRKQRPFWRVSVWSN    AAAASSYTATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQ---AAAASSYTATHA
A0A6J1CR01 uncharacterized protein LOC1110134239.5e-4596.77Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
        MELWHKMIFPVRRVWLAVSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSN AAAASS+TATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
A0A6J1JS76 uncharacterized protein LOC1114884372.3e-4394.62Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
        MELWHKMIFPVRRVWL VSARVRARKSGAGLLKLHDDVETCGYEDVKVMWE+LRRSESELVGH+PKRK RPFWRVSVWSN AAAASSYTATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43150.1 unknown protein4.0e-1137.5Show/hide
Query:  RFMELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL---VGHQPKRKQRPFWRV
        R+ E W+ M FP RR+W   + RV  R S  GLL+L  DV +C YED+ +MW +L ++E      +  Q +++++P W +
Subjt:  RFMELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL---VGHQPKRKQRPFWRV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAGGCGGAGCCGGAGTAACACCAAAGTTAAGCATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGTGTTAG
GGCTAGGAAAAGTGGAGCTGGACTTCTGAAGCTTCATGATGATGTAGAAACTTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGTTACGTCGATCGGAGTCAGAGT
TGGTCGGTCACCAACCGAAACGCAAGCAGCGACCGTTTTGGAGAGTCTCTGTGTGGTCCAACCAAGCTGCTGCAGCCTCTTCTTACACTGCAACTCATGCTTGA
mRNA sequenceShow/hide mRNA sequence
AAGAGGCGGAGCCGGAGTAACACCAAAGTTAAGCATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGTGTTAG
GGCTAGGAAAAGTGGAGCTGGACTTCTGAAGCTTCATGATGATGTAGAAACTTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGTTACGTCGATCGGAGTCAGAGT
TGGTCGGTCACCAACCGAAACGCAAGCAGCGACCGTTTTGGAGAGTCTCTGTGTGGTCCAACCAAGCTGCTGCAGCCTCTTCTTACACTGCAACTCATGCTTGA
Protein sequenceShow/hide protein sequence
KRRSRSNTKVKHRFMELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNQAAAASSYTATHA