CuGenDBv2

Gene ID	HG10023221
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Genome location	Chr05:32314137..32317382
RNA-Seq Expression	HG10023221
Synteny	HG10023221
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR044983 - Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0058709.1 photosynthetic NDH subunit of subcomplex B 1 [Cucumis melo var. makuwa]

7.3e-253

94.46

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Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF PTSSFPPSSPS+HFTKPLFL P  ISLST    SSKL+IP SKKNPW DPFDDG+DPEMEYGSLF+DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA
        GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+A
Subjt:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN
        EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIPHEKERENVEEEVG NASIVF+TTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN

Query:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        TAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSS TGRLIDIDMGT+KKAIQSFEVPLALAF
Subjt:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

KAG6575629.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-254

94.26

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Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPF P SSFPPSSPS+HFTKP FL PPDISLSTSSSS SKL IPS +KKNPWLDPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        KGRYYDMVLSTKLAGIGHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPHEKERENVEEEVG+NASIVF+TTPGQLAALINDSAG+IAT
Subjt:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT

Query:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        NTAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSS TGRLIDIDMGTVK+AIQSFEVPLALAF
Subjt:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

XP_022953552.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]

1.7e-254

94.26

Show/hide

Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPF P SSFPPSSPS+HFTKP FL PPDISLSTSSSS SKL IPS +KKNPWLDPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        KGRYYDMVLSTKLAGIGHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPHEKERENVEEEVG+NASIVF+TTPGQLAALINDSAG+IAT
Subjt:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT

Query:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        NTAA+QLAIAREKPSIALFCSEEKAKLFVPD+EAKRCI VSSATGRLIDIDMGTVK+AIQSFEVPLALAF
Subjt:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

XP_022992479.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]

1.5e-253

94.04

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Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPF P SSFPPSSPS+HFTKP FL PPDISLSTSSSS SKL IPS +KKNPWLDPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        KGRYYDMVLSTKLAGIGHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPHEKERENVEEEVG+NASIVF+TTPGQLAALINDSAG+IAT
Subjt:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT

Query:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        NTAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSSATGRLIDIDMGTVK+AIQSFEVPLALAF
Subjt:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

XP_038896546.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]

1.2e-258

96.38

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Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF PTSSF PSSPS+HFTKPLFL PPDISLSTSSSSSSKL IPSSKKN WLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA
        GRYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA
Subjt:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN
        EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN +RGFKPVFVIPHEKERENVEEEVG++ASIVF+TTPGQLAALINDSAG+IATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN

Query:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        TAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRL DID+GTVKKAIQSFEVPLALAF
Subjt:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6S9 Uncharacterized protein

7.4e-251

92.96

Show/hide

Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF PTSSFPPSSPS+HFTKP FL PP ISLST    SSK QIP SKKNPW DPFDDG+DPEMEYGSL++DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA
        GRYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+A
Subjt:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN
        EKY+KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA  IRGFKPVFVIPHEKERE+VEEEVG NASIVF+TTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN

Query:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        TAA+QLAIAREKPSIALFCSEEKAKLFVP+AEAKRCITVSSATGRLIDIDMGT+KKAIQSFEVPLALAF
Subjt:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

A0A1S3CEK1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

3.0e-252

94.24

Show/hide

Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF PTSSFPPSSPS+HFTKPLFL P  ISLST    SSKL+IP SKKNPW DPFDDG+DPEMEYGSLF+DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA
        GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+A
Subjt:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN
        EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIP EKERENVEEEVG NASIVF+TTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN

Query:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        TAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSS TGRLIDIDMGT+KKAIQSFEVPLALAF
Subjt:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

A0A5A7UYW0 Photosynthetic NDH subunit of subcomplex B 1

3.5e-253

94.46

Show/hide

Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF PTSSFPPSSPS+HFTKPLFL P  ISLST    SSKL+IP SKKNPW DPFDDG+DPEMEYGSLF+DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA
        GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+A
Subjt:  GRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN
        EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIPHEKERENVEEEVG NASIVF+TTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATN

Query:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        TAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSS TGRLIDIDMGT+KKAIQSFEVPLALAF
Subjt:  TAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

A0A6J1GNJ2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

8.4e-255

94.26

Show/hide

Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPF P SSFPPSSPS+HFTKP FL PPDISLSTSSSS SKL IPS +KKNPWLDPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        KGRYYDMVLSTKLAGIGHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPHEKERENVEEEVG+NASIVF+TTPGQLAALINDSAG+IAT
Subjt:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT

Query:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        NTAA+QLAIAREKPSIALFCSEEKAKLFVPD+EAKRCI VSSATGRLIDIDMGTVK+AIQSFEVPLALAF
Subjt:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

A0A6J1JXN2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

7.1e-254

94.04

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Query:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPF P SSFPPSSPS+HFTKP FL PPDISLSTSSSS SKL IPS +KKNPWLDPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPS-SKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        KGRYYDMVLSTKLAGIGHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIAN IRGFKPVFVIPHEKERENVEEEVG+NASIVF+TTPGQLAALINDSAG+IAT
Subjt:  AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIAT

Query:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF
        NTAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSSATGRLIDIDMGTVK+AIQSFEVPLALAF
Subjt:  NTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKKAIQSFEVPLALAF

SwissProt top hits

e value

%identity

Alignment

Q9S9N6 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

7.0e-190

73.02

Show/hide

Query:  SSLP--TKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGF
        SSLP   K + PFF T   PP S S    KPL  +     L TS SS   + +   K NPWLDPFD G+DP+ EYGSLFADGKQ+EDPRPPDNP+NPYGF
Subjt:  SSLP--TKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGF

Query:  LKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKG
        LKFP+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPAEYTDM+GLLKG
Subjt:  LKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKG

Query:  RYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVAE
        RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KEVVA 
Subjt:  RYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVAE

Query:  KYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATNT
        KY+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENVE+ VG++ SIVF+TTPGQLAALINDSAG+IATNT
Subjt:  KYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATNT

Query:  AALQLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKKAIQSFEVPLAL
        AA+QLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Subjt:  AALQLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKKAIQSFEVPLAL

Arabidopsis top hits

e value

%identity

Alignment

AT1G15980.1 NDH-dependent cyclic electron flow 1

5.0e-191

73.02

Show/hide

Query:  SSLP--TKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGF
        SSLP   K + PFF T   PP S S    KPL  +     L TS SS   + +   K NPWLDPFD G+DP+ EYGSLFADGKQ+EDPRPPDNP+NPYGF
Subjt:  SSLP--TKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGF

Query:  LKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKG
        LKFP+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPAEYTDM+GLLKG
Subjt:  LKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKG

Query:  RYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVAE
        RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KEVVA 
Subjt:  RYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVAE

Query:  KYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATNT
        KY+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENVE+ VG++ SIVF+TTPGQLAALINDSAG+IATNT
Subjt:  KYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATNT

Query:  AALQLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKKAIQSFEVPLAL
        AA+QLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Subjt:  AALQLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKKAIQSFEVPLAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTACTTCTTCTCTACCCACCAAATCTCTCCCGCCATTTTTCCCCACTTCAAGCTTTCCACCTTCTTCTCCTTCATCCCACTTCACTAAGCCGCTCTTTCTAGTCCC
ACCGGACATTTCCCTCTCCACTTCTTCCTCATCCTCCTCAAAGCTTCAAATCCCCAGTTCCAAGAAGAATCCCTGGCTCGATCCCTTCGACGATGGGGATGATCCGGAGA
TGGAATACGGCTCTCTCTTCGCTGACGGGAAGCAGGAAGAGGACCCTCGGCCGCCGGACAATCCGAACAATCCATATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTG
GAAATTGCTTCTCTGGGCCTCAAACTACGGGGAGATGTACGGCGGTGCTGCTGTGTGATCTCTGGCGGTGTGTATGAGAACCTCCTCTTCTTTCCCGCGATTCAGTTGCT
TAAGGATCGGTACCCGGGTGTTCAAATCGACGTGGTGGCTTCGGCGAGGGGCAAACAGACTTATGAATTGAATAAGAATGTGCGATGGTCTAATGTCTATGATCCGGATG
ATTATTTTCCTGAACCAGCGGAGTATACTGACATGGTTGGATTGCTCAAGGGCAGGTATTATGACATGGTCTTGTCAACCAAGCTAGCAGGGATTGGGCATGCTGTGTTT
TTGTTTATGACAACAGCAAGAGACAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCTAATCT
TTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTAGGGAGGCCATTTCGCAGCGTTCCCAGGCATCCCGTTCCTCCACTTAAAGTTTCGATTTCGAGAA
AATTGAAAGAGGTTGTAGCAGAAAAATATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAA
GGTGATACTGATAGCTTGCTACCCATTCAAGCCTGGGCAGAAATAGCCAATTTTATAAGGGGATTCAAGCCAGTTTTTGTCATTCCACATGAAAAGGAAAGGGAAAATGT
TGAGGAGGAGGTTGGAGAAAATGCAAGTATCGTATTTATGACGACCCCGGGACAGCTTGCTGCTCTCATTAATGACTCGGCCGGTCTAATAGCTACCAACACAGCTGCGC
TCCAACTCGCCATTGCTCGTGAAAAACCAAGCATTGCCTTGTTTTGTTCTGAAGAGAAAGCAAAACTATTTGTTCCCGATGCCGAAGCAAAGAGATGCATCACAGTTTCG
TCAGCAACAGGACGACTAATCGACATCGATATGGGTACAGTTAAAAAGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCTTTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MATSSLPTKSLPPFFPTSSFPPSSPSSHFTKPLFLVPPDISLSTSSSSSSKLQIPSSKKNPWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMV
EIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYYDMVLSTKLAGIGHAVF
LFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVAEKYKKAGAEKGKYIVIHGIESDSKASMQSK
GDTDSLLPIQAWAEIANFIRGFKPVFVIPHEKERENVEEEVGENASIVFMTTPGQLAALINDSAGLIATNTAALQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVS
SATGRLIDIDMGTVKKAIQSFEVPLALAF

HG10023221 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome