; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10023241 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023241
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionserine-rich protein-related
Genome locationChr05:32452259..32452552
RNA-Seq ExpressionHG10023241
SyntenyHG10023241
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]4.8e-3479.81Show/hide
Query:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT----APPRGSQSKAA--TTDH-LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHR
        MANKT SSSRLCLCAPTTHPGSFRCSLHRRPS +S KT     PP GSQSKAA  TTDH  +KAFLMQIVKPSSH LQRR NFQPKPSRFCN+V A D R
Subjt:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT----APPRGSQSKAA--TTDH-LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHR

Query:  LAVS
        LAVS
Subjt:  LAVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2975Show/hide
Query:  MANKTG-SSSRLCLCAPTTHPGSFRCSLHRRPSKASDK--TAPPRGSQSKAATTDHLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHRLAVS
        MANKT  SS RLCLCAPTTHPGSFRCSLHRR  KAS+K    PP G+QSKA +   LVKAFLMQ++KPSS DLQRRRNFQPKPSRFCN   ASD+ LAVS
Subjt:  MANKTG-SSSRLCLCAPTTHPGSFRCSLHRRPSKASDK--TAPPRGSQSKAATTDHLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHRLAVS

KAG7014157.1 hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3178.22Show/hide
Query:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDH----LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHRLAV
        MANKT SSSRLCLCAPT+HPGSFRCSLHRRP KASDKT   RGSQSKAAT       L K FLMQ +KPSSHDL RRRNFQPKPSRFCN   ASDHRL V
Subjt:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDH----LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHRLAV

Query:  S
        S
Subjt:  S

KGN45240.1 hypothetical protein Csa_016736 [Cucumis sativus]3.1e-3379.05Show/hide
Query:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAP-----PRGSQSKAA--TTD-HLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDH
        M NKT SSSRLCLCAPTTHPGSFRCSLHRR S +S KT P     PRGSQSKAA  TTD HL+KAFLMQIVKPSSHDLQRR +F+PKPSRFC+VV ASD 
Subjt:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAP-----PRGSQSKAA--TTD-HLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDH

Query:  RLAVS
        RLAVS
Subjt:  RLAVS

XP_008461151.1 PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]1.8e-3378.85Show/hide
Query:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT----APPRGSQSKAA--TTDH-LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHR
        M NKT SSSRLCLCAPTTHPGSFRCSLHRRPS +S KT     PP GSQSKAA  TTDH  +KAFLMQIVKPSSH LQRR NFQPKPSRFCN+V A D R
Subjt:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT----APPRGSQSKAA--TTDH-LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHR

Query:  LAVS
        LAVS
Subjt:  LAVS

TrEMBL top hitse value%identityAlignment
A0A0A0K698 Uncharacterized protein1.5e-3379.05Show/hide
Query:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAP-----PRGSQSKAA--TTD-HLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDH
        M NKT SSSRLCLCAPTTHPGSFRCSLHRR S +S KT P     PRGSQSKAA  TTD HL+KAFLMQIVKPSSHDLQRR +F+PKPSRFC+VV ASD 
Subjt:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAP-----PRGSQSKAA--TTD-HLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDH

Query:  RLAVS
        RLAVS
Subjt:  RLAVS

A0A1S3CEH6 uncharacterized protein LOC1034998228.9e-3478.85Show/hide
Query:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT----APPRGSQSKAA--TTDH-LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHR
        M NKT SSSRLCLCAPTTHPGSFRCSLHRRPS +S KT     PP GSQSKAA  TTDH  +KAFLMQIVKPSSH LQRR NFQPKPSRFCN+V A D R
Subjt:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT----APPRGSQSKAA--TTDH-LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHR

Query:  LAVS
        LAVS
Subjt:  LAVS

A0A5A7UZ19 Uncharacterized protein2.3e-3479.81Show/hide
Query:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT----APPRGSQSKAA--TTDH-LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHR
        MANKT SSSRLCLCAPTTHPGSFRCSLHRRPS +S KT     PP GSQSKAA  TTDH  +KAFLMQIVKPSSH LQRR NFQPKPSRFCN+V A D R
Subjt:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT----APPRGSQSKAA--TTDH-LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHR

Query:  LAVS
        LAVS
Subjt:  LAVS

A0A5B7BSA6 Uncharacterized protein (Fragment)3.6e-1961.9Show/hide
Query:  NKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAP--PRGSQSKAATTDHLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFC
        + + SS+R CLC+PTTHPGSFRCSLHR   K S ++     R   SK  +   L+KAFLM I+KPSSHDLQRRRNFQPKP+RFC
Subjt:  NKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAP--PRGSQSKAATTDHLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFC

A0A6J1DD51 uncharacterized protein LOC1110193813.1e-2673.33Show/hide
Query:  MANKT----GSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV
        MA KT     S+SRLCLCAPTTHPGSFRCSLHRRP KASDK+     S         LVKAFLMQI+KPSSHDLQRRRNFQPKPSRFCNV
Subjt:  MANKT----GSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein9.2e-0741.51Show/hide
Query:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDH
        ++ +T  +  +C+C+PTTHPGSF+C LHR PS   +K+      QS     DH
Subjt:  MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDH

AT5G11090.1 serine-rich protein-related1.2e-1136.19Show/hide
Query:  SRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHL---------------------VKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVV
        SR C+C+PTTHPGSFRCSLH+         A P G  + + TT+ L                     V+  L  +++PSSH L+RR  +QP+PSR   + 
Subjt:  SRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHL---------------------VKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVV

Query:  VASDH
         A ++
Subjt:  VASDH

AT5G20370.1 serine-rich protein-related4.1e-0735.58Show/hide
Query:  SSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPP-------RGSQS----------KAATTDHLVK-----------AFLMQIVKPSSHDLQRRRNFQPK
        + R CLC+PTTHPGSFRCS HRR      KT          RG  +          K A  + L K           +    + KPSS    RR  F+P+
Subjt:  SSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPP-------RGSQS----------KAATTDHLVK-----------AFLMQIVKPSSHDLQRRRNFQPK

Query:  PSRF
         SRF
Subjt:  PSRF

AT5G25280.1 serine-rich protein-related2.7e-1134.55Show/hide
Query:  NKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHL---------------------VKAFLMQIVKPSSHDLQRRRNFQPKPS
        +K   S R C+C+PTTHPGSFRCSLH+         A P G  + + TT+ L                     V+  L  +++PSSH L+RR  ++P+ S
Subjt:  NKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHL---------------------VKAFLMQIVKPSSHDLQRRRNFQPKPS

Query:  RFCNVVVASD
        R  ++  A D
Subjt:  RFCNVVVASD

AT5G25280.2 serine-rich protein-related2.7e-1134.55Show/hide
Query:  NKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHL---------------------VKAFLMQIVKPSSHDLQRRRNFQPKPS
        +K   S R C+C+PTTHPGSFRCSLH+         A P G  + + TT+ L                     V+  L  +++PSSH L+RR  ++P+ S
Subjt:  NKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHL---------------------VKAFLMQIVKPSSHDLQRRRNFQPKPS

Query:  RFCNVVVASD
        R  ++  A D
Subjt:  RFCNVVVASD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAAAACCGGTTCCTCTTCCCGCCTCTGTCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGTCTCCACCGCCGTCCGTCGAAGGCCTCCGACAA
AACGGCGCCTCCGCGTGGAAGCCAATCGAAAGCAGCGACGACGGATCATCTCGTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCACGATCTCCAGAGACGGA
GGAATTTCCAGCCTAAACCTTCTCGATTTTGCAATGTCGTCGTCGCTTCGGATCATCGATTGGCTGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACAAAACCGGTTCCTCTTCCCGCCTCTGTCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGTCTCCACCGCCGTCCGTCGAAGGCCTCCGACAA
AACGGCGCCTCCGCGTGGAAGCCAATCGAAAGCAGCGACGACGGATCATCTCGTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCACGATCTCCAGAGACGGA
GGAATTTCCAGCCTAAACCTTCTCGATTTTGCAATGTCGTCGTCGCTTCGGATCATCGATTGGCTGTTTCTTGA
Protein sequenceShow/hide protein sequence
MANKTGSSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTAPPRGSQSKAATTDHLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVVASDHRLAVS