; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10023291 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023291
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description39S ribosomal protein L41-A, mitochondrial
Genome locationChr05:32773533..32774839
RNA-Seq ExpressionHG10023291
SyntenyHG10023291
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_002513969.1 39S ribosomal protein L41-A, mitochondrial [Ricinus communis]1.6e-3091.89Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKRAFM
        MALGLILG+GRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK  F+
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKRAFM

XP_015571444.1 39S ribosomal protein L41-A, mitochondrial-like [Ricinus communis]6.2e-3095.71Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        MALGLILG+GRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

XP_021600476.1 39S ribosomal protein L41-A, mitochondrial [Manihot esculenta]6.2e-3095.71Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        M LGLILG+GRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]1.6e-3097.14Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNY+VPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]1.3e-3098.57Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein5.1e-3095.71Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDL+DFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

A0A2C9U139 Uncharacterized protein3.0e-3095.71Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        M LGLILG+GRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

A0A5A7UUA4 39S ribosomal protein L41-A5.1e-3095.71Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDL+DFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial7.9e-3197.14Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNY+VPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

B9RJQ0 Uncharacterized protein7.9e-3191.89Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKRAFM
        MALGLILG+GRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK  F+
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKRAFM

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial1.2e-0447.83Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FK
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

Q6DJI4 39S ribosomal protein L41-A, mitochondrial7.2e-0539.71Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FK
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

Q6INF3 39S ribosomal protein L41-B, mitochondrial1.2e-0439.71Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FK
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

Q9CQN7 39S ribosomal protein L41, mitochondrial1.2e-0445.65Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FK
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L275.8e-2678.57Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYV+ P+KLPNYVVPDLT FK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

AT5G39800.1 Mitochondrial ribosomal protein L272.1e-2882.09Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        GL++G+GR+ RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYV+ P+KLPNYVVPDLT FK
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK

AT5G40080.1 Mitochondrial ribosomal protein L272.8e-2882.09Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK
        GL++G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYV+ P+KLPNYVVPDLT FK
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTAGGACTAATATTGGGACTTGGAAGAGCAATGCGGAGGAAGCGTACATCTTCTCTGGACATTCTTTCATCTAAACGAGCTCCACGAGATTACTATAAG
GGCAAGAATTGCAAGCCTACTGGTTTTCATACGCGTAAAGGTGGATATGTATTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAG
AGAGCTTTTATGCTACATTTTTTTTCTGATAGCTTCCCCAATGATGCTTTTGAGTTAAATAGTTGTGGGGAAAGTAGAGTTAGGGGACTTTTGTCTGCTAAGGAA
AATTGTTTTTGGCTGGTGGTAGAGCGACTAGCAGGCACCTTTACCGTTGAAGCTTACTGCCTTGTGGGGAAAGCTAGGGGACTCTTGCTTGCTAAGGAAGTTTGT
TTATGGCTGGTTGTAGGGCAACTAGCTCTGGCAACTTGGCCTATGAAGCTTTGCTGCTCTTTTAAGAGTTTTGTCATAATTCTGTATAACAAGATGTGCATCAAT
TTGAAAAGTCAAGGACTCAAGATTGACGATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTAGGACTAATATTGGGACTTGGAAGAGCAATGCGGAGGAAGCGTACATCTTCTCTGGACATTCTTTCATCTAAACGAGCTCCACGAGATTACTATAAG
GGCAAGAATTGCAAGCCTACTGGTTTTCATACGCGTAAAGGTGGATATGTATTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAG
AGAGCTTTTATGCTACATTTTTTTTCTGATAGCTTCCCCAATGATGCTTTTGAGTTAAATAGTTGTGGGGAAAGTAGAGTTAGGGGACTTTTGTCTGCTAAGGAA
AATTGTTTTTGGCTGGTGGTAGAGCGACTAGCAGGCACCTTTACCGTTGAAGCTTACTGCCTTGTGGGGAAAGCTAGGGGACTCTTGCTTGCTAAGGAAGTTTGT
TTATGGCTGGTTGTAGGGCAACTAGCTCTGGCAACTTGGCCTATGAAGCTTTGCTGCTCTTTTAAGAGTTTTGTCATAATTCTGTATAACAAGATGTGCATCAAT
TTGAAAAGTCAAGGACTCAAGATTGACGATTCCTAA
Protein sequenceShow/hide protein sequence
MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKRAFMLHFFSDSFPNDAFELNSCGESRVRGLLSAKE
NCFWLVVERLAGTFTVEAYCLVGKARGLLLAKEVCLWLVVGQLALATWPMKLCCSFKSFVIILYNKMCINLKSQGLKIDDS