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HG10023312 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023312
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionneurogenic locus notch homolog protein 3-like
Genome locationChr05:32951663..32952868
RNA-Seq ExpressionHG10023312
SyntenyHG10023312
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015869449.2 neurogenic locus notch homolog protein 3-like [Ziziphus jujuba]1.2e-1853.61Show/hide
Query:  ATSGILNSSSSSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPFEFSN
        ++S I    S+ L   VC+ INCGQGTCKASNAS LGFDCEC  GW+K+QIG  TFP C+LPN T +FQ G   P P P  P   +P    P   SN
Subjt:  ATSGILNSSSSSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPFEFSN

XP_022145504.1 uncharacterized protein LOC111014937 isoform X1 [Momordica charantia]8.2e-3671.43Show/hide
Query:  EEGFGLCILISFQFFLATSGILNSSS---SSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS
        E  F + ILIS QFFLATS  LNSS    SS    VCSVINCGQGTCKASNASFLGFDCECNSGWR+LQIG FTFP CVLPN   +F+ GG  P PPPL 
Subjt:  EEGFGLCILISFQFFLATSGILNSSS---SSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS

Query:  PTTVVPFLHTPFEFSNCTA
        PTTVVPFL +PF FSN +A
Subjt:  PTTVVPFLHTPFEFSNCTA

XP_022145513.1 uncharacterized protein LOC111014937 isoform X2 [Momordica charantia]2.4e-3572.41Show/hide
Query:  EEGFGLCILISFQFFLATSGILNSSS---SSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS
        E  F + ILIS QFFLATS  LNSS    SS    VCSVINCGQGTCKASNASFLGFDCECNSGWR+LQIG FTFP CVLPN   +F+ GG  P PPPL 
Subjt:  EEGFGLCILISFQFFLATSGILNSSS---SSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS

Query:  PTTVVPFLHTPFEFSN
        PTTVVPFL +PF FSN
Subjt:  PTTVVPFLHTPFEFSN

XP_035548234.1 neurogenic locus notch homolog protein 3-like [Juglans regia]1.2e-1858.82Show/hide
Query:  VCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPFEFSNCTAL
        VC++INCG+GTCKASNAS LGFDCECN GW+K+Q+G  TFP CV+PN T +FQ G     PPP  P  +VP    P   SN  AL
Subjt:  VCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPFEFSNCTAL

XP_038899645.1 uncharacterized protein LOC120086904 [Benincasa hispida]1.4e-4085.85Show/hide
Query:  MEEGFGLC--ILISFQFFLATSGILNSSSSSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS
        MEEG  LC  ILISFQFFLATSGILNSS+S  GTAVCSVINCGQGTCKASNASFLGFDCECN GWRK QIGLFTFPYCVLPN TAEFQSGG  P PP L 
Subjt:  MEEGFGLC--ILISFQFFLATSGILNSSSSSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS

Query:  PTTVVP
        PTTVVP
Subjt:  PTTVVP

TrEMBL top hitse value%identityAlignment
A0A1Q3AZ56 Uncharacterized protein (Fragment)1.3e-1856.98Show/hide
Query:  CSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSG-GIYPRPPPLS----PTTVVPFLHTPFEFSNC
        C+++NCGQGTCKASN+S LGF+C CN GW+K+QIG  TFP CV+PN T +FQ G G  P PPP S    P    PFL  P  F  C
Subjt:  CSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSG-GIYPRPPPLS----PTTVVPFLHTPFEFSNC

A0A6J1CVF7 uncharacterized protein LOC111014937 isoform X14.0e-3671.43Show/hide
Query:  EEGFGLCILISFQFFLATSGILNSSS---SSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS
        E  F + ILIS QFFLATS  LNSS    SS    VCSVINCGQGTCKASNASFLGFDCECNSGWR+LQIG FTFP CVLPN   +F+ GG  P PPPL 
Subjt:  EEGFGLCILISFQFFLATSGILNSSS---SSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS

Query:  PTTVVPFLHTPFEFSNCTA
        PTTVVPFL +PF FSN +A
Subjt:  PTTVVPFLHTPFEFSNCTA

A0A6J1CW51 uncharacterized protein LOC111014937 isoform X21.2e-3572.41Show/hide
Query:  EEGFGLCILISFQFFLATSGILNSSS---SSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS
        E  F + ILIS QFFLATS  LNSS    SS    VCSVINCGQGTCKASNASFLGFDCECNSGWR+LQIG FTFP CVLPN   +F+ GG  P PPPL 
Subjt:  EEGFGLCILISFQFFLATSGILNSSS---SSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLS

Query:  PTTVVPFLHTPFEFSN
        PTTVVPFL +PF FSN
Subjt:  PTTVVPFLHTPFEFSN

A0A6P3YZ54 neurogenic locus notch homolog protein 3-like5.8e-1953.61Show/hide
Query:  ATSGILNSSSSSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPFEFSN
        ++S I    S+ L   VC+ INCGQGTCKASNAS LGFDCEC  GW+K+QIG  TFP C+LPN T +FQ G   P P P  P   +P    P   SN
Subjt:  ATSGILNSSSSSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPFEFSN

A0A6P9EL29 neurogenic locus notch homolog protein 3-like5.8e-1958.82Show/hide
Query:  VCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPFEFSNCTAL
        VC++INCG+GTCKASNAS LGFDCECN GW+K+Q+G  TFP CV+PN T +FQ G     PPP  P  +VP    P   SN  AL
Subjt:  VCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPFEFSNCTAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14746.1 CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).1.3e-0735.71Show/hide
Query:  ATSGILNSSSSSLGTAVCSVINCGQGTCKA-SNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSG----GIYPRPPP
        ATS  L+   + +   +C  + CG+G CKA SN +F+ ++CEC  GW++    L   P C+ PN T +   G       P+PPP
Subjt:  ATSGILNSSSSSLGTAVCSVINCGQGTCKA-SNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSG----GIYPRPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGGCTTCGGTCTCTGCATCCTCATTTCTTTTCAGTTCTTCCTTGCAACCAGTGGAATTCTGAACTCTTCAAGCTCATCACTAGGTACTGCTGTGTGCTCAGT
CATAAATTGTGGGCAAGGAACTTGCAAGGCATCTAATGCTTCATTTCTTGGTTTCGATTGCGAGTGCAACTCCGGTTGGAGGAAACTCCAAATTGGTTTGTTCACCTTCC
CCTATTGTGTTCTTCCCAACAGCACTGCCGAATTCCAAAGTGGCGGCATATATCCACGTCCACCACCACTGTCACCGACAACGGTGGTTCCTTTCCTTCATACACCTTTC
GAATTTTCAAACTGTACTGCTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGGCTTCGGTCTCTGCATCCTCATTTCTTTTCAGTTCTTCCTTGCAACCAGTGGAATTCTGAACTCTTCAAGCTCATCACTAGGTACTGCTGTGTGCTCAGT
CATAAATTGTGGGCAAGGAACTTGCAAGGCATCTAATGCTTCATTTCTTGGTTTCGATTGCGAGTGCAACTCCGGTTGGAGGAAACTCCAAATTGGTTTGTTCACCTTCC
CCTATTGTGTTCTTCCCAACAGCACTGCCGAATTCCAAAGTGGCGGCATATATCCACGTCCACCACCACTGTCACCGACAACGGTGGTTCCTTTCCTTCATACACCTTTC
GAATTTTCAAACTGTACTGCTCTCTAA
Protein sequenceShow/hide protein sequence
MEEGFGLCILISFQFFLATSGILNSSSSSLGTAVCSVINCGQGTCKASNASFLGFDCECNSGWRKLQIGLFTFPYCVLPNSTAEFQSGGIYPRPPPLSPTTVVPFLHTPF
EFSNCTAL