; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10023325 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023325
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionthionin-like protein 2
Genome locationChr05:33095293..33100765
RNA-Seq ExpressionHG10023325
SyntenyHG10023325
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4182.65Show/hide
Query:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV
        MKSIV+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF AS+P DL+H+DTHYFCKLGCATSLCTKFSTK DP E++ +  V
Subjt:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]9.3e-3877.89Show/hide
Query:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQ
        MKS+V+ICFILSL+AGRSTASF KCYAKCF+ CAITPGI +GTCGA CLA CLFIAS+PMD +HM+THYFCKLGCATS+CTKFSTK DP E++ +
Subjt:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQ

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4182.65Show/hide
Query:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV
        MKSIV+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF AS+P DL+H+DTHYFCKLGCATSLCTKFSTK DP E++ +  V
Subjt:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]1.4e-4181.63Show/hide
Query:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV
        MKS+V+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF+AS+P DL+H+DTHYFCKLGCATSLCTKFSTK DP E++ +  V
Subjt:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]1.6e-4283.67Show/hide
Query:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV
        MKS++LICFI+SLV GRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCL DCLFIASSP+D +H+DTHYFCKLGCATSLCTKFSTKKDP E++ +  V
Subjt:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV

TrEMBL top hitse value%identityAlignment
A0A061GC54 To encode a PR protein, Belongs to the plant thionin family with the following members:, putative1.2e-2536.45Show/hide
Query:  MKSIVLICFILSLVAGRSTASFG-KCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWVI
        + +++++C +L  + G+STA     CYA CF+ C          C AKCL DC+   S+   +   DT YFCKLGCAT+LCT  STK+DPG+  AQ    
Subjt:  MKSIVLICFILSLVAGRSTASFG-KCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWVI

Query:  VGRSFSDSGVVNTVSAAGLQQRGRSVAVWISDLQGGFRGYSWRVDLSIISGRWPACFSCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEK
                              G +V  + +         +       I      C      P ST+     DT +FCKLGCAT+LCT  STKEDP E+K
Subjt:  VGRSFSDSGVVNTVSAAGLQQRGRSVAVWISDLQGGFRGYSWRVDLSIISGRWPACFSCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEK

Query:  VEGCVNACGQTCTK
        V  CV+AC  TC K
Subjt:  VEGCVNACGQTCTK

A0A0A0KC18 Uncharacterized protein1.2e-4381.13Show/hide
Query:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWVIV
        MKS+VLICFILSLVAGRSTASFGKCYAKCF+VCAITPGIP+GTCGAKCLADCLFIASSPMDL++MDTHYFCKLGCATS CTKFSTKKDPG++ +   V  
Subjt:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWVIV

Query:  GRSFSD
          S+++
Subjt:  GRSFSD

A0A5D3BCH5 Thionin-like protein 22.7e-2261.22Show/hide
Query:  MKSIVLICFILSLVAGRST--ASFGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQ
        M+SIVLI FILSLVAGRST      K + KC   CAI P IP +  C  KC+ADC+ +ASSPMDL+ MDTHYFCKLGC T  CTK STKKD  E + +
Subjt:  MKSIVLICFILSLVAGRST--ASFGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQ

A0A6J1DDL8 thionin-like protein 21.1e-3175Show/hide
Query:  IVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLF-IASSPMDL-DHMDTHYFCKLGCATSLCTKFSTKKDPGERE
        ++L+  +LSLVAG+STASFGKCYAKCFVVCAITPGIP+GTC AKCL DCLF  AS+  D  D +DT YFCKLGCATSLCTKFSTKKDP E++
Subjt:  IVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLF-IASSPMDL-DHMDTHYFCKLGCATSLCTKFSTKKDPGERE

A0A6J1KDK0 thionin-like protein 26.7e-4281.63Show/hide
Query:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV
        MKS+V+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF+AS+P DL+H+DTHYFCKLGCATSLCTKFSTK DP E++ +  V
Subjt:  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 27.5e-0640Show/hide
Query:  CITNPS----STMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTK
        C+  PS    S+ ++D  ++++FCKLGCAT  C   S+ ++P  E+V  CV++C   CTK
Subjt:  CITNPS----STMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTK

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.5.3e-0740Show/hide
Query:  CITNPS----STMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTK
        C+  PS    S+ ++D  ++++FCKLGCAT  C   S+ ++P  E+V  CV++C   CTK
Subjt:  CITNPS----STMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTK

AT1G12672.1 unknown protein5.9e-0637.04Show/hide
Query:  ITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCT
        +T   ST +++H D  ++CKLGC+T  C   S+ ++P  +KV  CV++C   C+
Subjt:  ITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCT

AT1G12672.2 unknown protein2.0e-0638.33Show/hide
Query:  SCITNPSSTMD----LDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCT
        +C+  PSS MD    ++H D  ++CKLGC+T  C   S+ ++P  +KV  CV++C   C+
Subjt:  SCITNPSSTMD----LDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACC
AGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTG
GTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTGAAAGGGAAGCGCAGCCGTGGGTCATCGTCGGCCGTTCGTTTTCCGATAGTGGCGTCGTG
AATACTGTTTCAGCGGCGGGGTTGCAGCAGCGTGGACGAAGCGTTGCCGTTTGGATCTCCGATTTGCAGGGTGGTTTCAGAGGCTATAGTTGGCGCGTGGATCTCTCCAT
AATCAGTGGTCGTTGGCCGGCGTGCTTCTCTTGCATCACCAATCCATCTTCCACTATGGATTTGGACCATGTGGACACTAATCACTTCTGCAAACTTGGTTGTGCCACTT
CTCTATGCACCAAATTCAGCACCAAGGAAGATCCTGCTGAGGAGAAAGTAGAAGGCTGTGTGAACGCATGTGGTCAAACATGCACGAAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACC
AGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTG
GTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTGAAAGGGAAGCGCAGCCGTGGGTCATCGTCGGCCGTTCGTTTTCCGATAGTGGCGTCGTG
AATACTGTTTCAGCGGCGGGGTTGCAGCAGCGTGGACGAAGCGTTGCCGTTTGGATCTCCGATTTGCAGGGTGGTTTCAGAGGCTATAGTTGGCGCGTGGATCTCTCCAT
AATCAGTGGTCGTTGGCCGGCGTGCTTCTCTTGCATCACCAATCCATCTTCCACTATGGATTTGGACCATGTGGACACTAATCACTTCTGCAAACTTGGTTGTGCCACTT
CTCTATGCACCAAATTCAGCACCAAGGAAGATCCTGCTGAGGAGAAAGTAGAAGGCTGTGTGAACGCATGTGGTCAAACATGCACGAAAGCTTAG
Protein sequenceShow/hide protein sequence
MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWVIVGRSFSDSGVV
NTVSAAGLQQRGRSVAVWISDLQGGFRGYSWRVDLSIISGRWPACFSCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTKA