; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10023346 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10023346
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLOW QUALITY PROTEIN: ATP-dependent DNA helicase DDX11
Genome locationChr05:33258189..33258818
RNA-Seq ExpressionHG10023346
SyntenyHG10023346
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902859.1 PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo]6.4e-10092.82Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS
        MLLKETI KTNNLFHKTLE+FKDL FKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSID GSV+ASKENVKQEDT VA QS
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS

Query:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
        PPRS+QEKAV EKKKPGA HL+KGDV+NSSTRSN LV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
Subjt:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS

Query:  KRRMGSMRL
        KRRMGSMRL
Subjt:  KRRMGSMRL

XP_022954247.1 uncharacterized protein LOC111456559 [Cucurbita moschata]6.4e-9287.14Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSV-MASKENVKQEDTNVAKQ
        MLLKETI KT+NLFHKTL NFK L  KGFQKLQKPT LITFSCSK KPQHTHPTDRLYIDFYDEWQS LQK+AKRSID GSV M +K+N+KQEDTNVAKQ
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSV-MASKENVKQEDTNVAKQ

Query:  SPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNS
        SPPRSRQEKAV EKKKPG  HL+KGDV+NSS RSN L QKMKELEMLDRGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMD+HSE SVPEPSARSMNS
Subjt:  SPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNS

Query:  SKRRMGSMRL
        SKRRMGSMRL
Subjt:  SKRRMGSMRL

XP_023548201.1 uncharacterized protein LOC111806912 [Cucurbita pepo subsp. pepo]8.4e-9286.12Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS
        MLLKETI KT+NLFHKTL NFK L  KGFQKLQKPT LITFSCSK KPQHTHPTDRLYIDFYDEWQS LQK+AK++ID GSVM +K+N+KQEDTNVAKQS
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS

Query:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
        PPRSRQEKAV EKKKPG+ HL+KGDV+NSS RSN L QKMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKFFMD+HSE SVPEPSARSMNSS
Subjt:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS

Query:  KRRMGSMRL
        KRRMGSMRL
Subjt:  KRRMGSMRL

XP_031744975.1 uncharacterized protein LOC116405196 [Cucumis sativus]3.5e-9890.43Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS
        MLLK+TI KTNNLFHKTLENFK+L FKGFQKLQKPTSLIT SCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSID GS++ASKENVKQEDTNVA QS
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS

Query:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
        PPRS+QEKAV EKKKPGA HL+KGDV+N+STRSN LV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARS+NSS
Subjt:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS

Query:  KRRMGSMRL
        KRR+GSMRL
Subjt:  KRRMGSMRL

XP_038900276.1 uncharacterized protein LOC120087356 [Benincasa hispida]8.4e-10091.9Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKP-QHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQ
        MLLKETI KTNNLFHKTLENFKD  FKGFQKLQKPTSLITFSCSKGKP QHTHPTDRLYIDFYDEWQSTLQKAAKRS+D G+VM SKENVKQEDTNVAKQ
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKP-QHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQ

Query:  SPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNS
        SPPRSRQEK V EKKKPGA HL+KGDV+NSSTRSN LVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPS RS+NS
Subjt:  SPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNS

Query:  SKRRMGSMRL
        SKRR+GSMRL
Subjt:  SKRRMGSMRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAF5 Uncharacterized protein1.7e-9890.43Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS
        MLLK+TI KTNNLFHKTLENFK+L FKGFQKLQKPTSLIT SCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSID GS++ASKENVKQEDTNVA QS
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS

Query:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
        PPRS+QEKAV EKKKPGA HL+KGDV+N+STRSN LV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARS+NSS
Subjt:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS

Query:  KRRMGSMRL
        KRR+GSMRL
Subjt:  KRRMGSMRL

A0A1S4E3Q5 uncharacterized protein LOC1079919043.1e-10092.82Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS
        MLLKETI KTNNLFHKTLE+FKDL FKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSID GSV+ASKENVKQEDT VA QS
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS

Query:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
        PPRS+QEKAV EKKKPGA HL+KGDV+NSSTRSN LV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
Subjt:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS

Query:  KRRMGSMRL
        KRRMGSMRL
Subjt:  KRRMGSMRL

A0A5D3BXY4 Putative ATP-dependent RNA helicase DDX113.1e-10092.82Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS
        MLLKETI KTNNLFHKTLE+FKDL FKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSID GSV+ASKENVKQEDT VA QS
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS

Query:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
        PPRS+QEKAV EKKKPGA HL+KGDV+NSSTRSN LV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
Subjt:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS

Query:  KRRMGSMRL
        KRRMGSMRL
Subjt:  KRRMGSMRL

A0A6J1GQI6 uncharacterized protein LOC1114565593.1e-9287.14Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSV-MASKENVKQEDTNVAKQ
        MLLKETI KT+NLFHKTL NFK L  KGFQKLQKPT LITFSCSK KPQHTHPTDRLYIDFYDEWQS LQK+AKRSID GSV M +K+N+KQEDTNVAKQ
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSV-MASKENVKQEDTNVAKQ

Query:  SPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNS
        SPPRSRQEKAV EKKKPG  HL+KGDV+NSS RSN L QKMKELEMLDRGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMD+HSE SVPEPSARSMNS
Subjt:  SPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNS

Query:  SKRRMGSMRL
        SKRRMGSMRL
Subjt:  SKRRMGSMRL

A0A6J1JPP9 uncharacterized protein LOC1114887161.2e-9186.6Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS
        MLLKETI KT+NLFHKTL NFK L  KGFQKLQKPTSLITFSCSK KPQHTHPT+RLYIDFYDEWQS LQK+AK+SID GSVM +K+N+KQEDTNVAKQS
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQS

Query:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS
        PPRSRQEKAV E KKPG+ HL+KGDV+NSS RSN L QKMKELEMLDRGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMD+HSE SVPEPSARSMNSS
Subjt:  PPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSS

Query:  KRRMGSMRL
        KRRMGSMRL
Subjt:  KRRMGSMRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein1.3e-1343.59Show/hide
Query:  DTNVAKQSPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEP
        DT VA  +  +S   +    KKKP        D +    R + L QKMK+L M+D  D++  LD+ EA+  YS +RSPVYL+IVD FF DM+ E S P  
Subjt:  DTNVAKQSPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEP

Query:  SARSMNSSKRRMGSMRL
        SA+ +N S+R+ GS RL
Subjt:  SARSMNSSKRRMGSMRL

AT3G16070.1 unknown protein1.2e-1632.58Show/hide
Query:  QKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQSPPRSRQE
        QKTN+ FH+TL + K +I +  +KL +P +   FSC+  +  ++   D +Y  F + W+S L+ + +     G +    +  +QE  +  K++   S   
Subjt:  QKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQSPPRSRQE

Query:  KAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHS
                             SS   + + +K+ E+ M +  D+EQ LD+EEA+HYYSR+ SPVYL IVDKFF D++S
Subjt:  KAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHS

AT3G24535.1 unknown protein1.7e-0524.4Show/hide
Query:  MLLKETIQKTNNLFHKTLENFKDLIFKG--FQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAK
        M+L+ +I  T  LF KT++NFK   F    + KL K  +  + + +   P                  S +  ++  SI        K+ V    TN A 
Subjt:  MLLKETIQKTNNLFHKTLENFKDLIFKG--FQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAK

Query:  QSPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQE----LDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSA
           PR                   + +   S  + N +  K+KE+E +   D+  +     D+ E +H YSRLR   YL++V+ FFM+++S+   P    
Subjt:  QSPPRSRQEKAVTEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQE----LDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSA

Query:  RSMNSSKRR
         +  + +RR
Subjt:  RSMNSSKRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTAAAAGAAACCATCCAAAAAACCAACAACCTCTTCCATAAAACTCTTGAAAACTTCAAGGATTTAATTTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTC
CTTGATCACCTTTTCTTGCAGCAAAGGAAAACCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTGCAAAAAGCCGCAA
AGAGAAGCATTGACAGTGGAAGTGTGATGGCATCCAAGGAAAACGTGAAGCAAGAAGACACAAATGTTGCAAAACAAAGTCCTCCAAGAAGCAGACAAGAGAAGGCTGTG
ACAGAGAAGAAGAAACCAGGAGCTTTCCATCTTAAAAAAGGTGATGTTAGAAACAGTAGTACGAGAAGTAATGAGCTGGTACAAAAAATGAAAGAATTGGAGATGTTGGA
CAGGGGTGATATGGAACAAGAATTGGATATAGAAGAGGCAATTCATTATTACTCTCGCCTCAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGC
ACTCTGAAATCTCTGTTCCTGAGCCTTCTGCTAGGAGTATGAACAGCTCAAAGAGAAGAATGGGGTCCATGAGATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTAAAAGAAACCATCCAAAAAACCAACAACCTCTTCCATAAAACTCTTGAAAACTTCAAGGATTTAATTTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTC
CTTGATCACCTTTTCTTGCAGCAAAGGAAAACCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTGCAAAAAGCCGCAA
AGAGAAGCATTGACAGTGGAAGTGTGATGGCATCCAAGGAAAACGTGAAGCAAGAAGACACAAATGTTGCAAAACAAAGTCCTCCAAGAAGCAGACAAGAGAAGGCTGTG
ACAGAGAAGAAGAAACCAGGAGCTTTCCATCTTAAAAAAGGTGATGTTAGAAACAGTAGTACGAGAAGTAATGAGCTGGTACAAAAAATGAAAGAATTGGAGATGTTGGA
CAGGGGTGATATGGAACAAGAATTGGATATAGAAGAGGCAATTCATTATTACTCTCGCCTCAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGC
ACTCTGAAATCTCTGTTCCTGAGCCTTCTGCTAGGAGTATGAACAGCTCAAAGAGAAGAATGGGGTCCATGAGATTATAG
Protein sequenceShow/hide protein sequence
MLLKETIQKTNNLFHKTLENFKDLIFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDSGSVMASKENVKQEDTNVAKQSPPRSRQEKAV
TEKKKPGAFHLKKGDVRNSSTRSNELVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSSKRRMGSMRL