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IVF0000001 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000001
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr05:21192003..21192563
RNA-Seq ExpressionIVF0000001
SyntenyIVF0000001
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.98e-11796.77Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQT+SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRG+HNEYLYYEVPAAVPEQSDELQQQENAAVPGQSD QQQQEN EEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.29e-11595.21Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTK--SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQT+  SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTK--SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMH HGRGRGEHNEYLYYEVPAAVP+QSDE QQQENA VP QSD QQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.50e-118100Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.19e-11697.85Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQT+SEHNYVSPVMMMPTFGTTYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSD QQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.90e-11997.34Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTK--SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQT+  SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTK--SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSD QQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein7.8e-9598.39Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQT+SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSD QQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein1.9e-9396.77Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQT+SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRG+HNEYLYYEVPAAVPEQSDELQQQENAAVPGQSD QQQQEN EEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein8.3e-97100Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.6e-9497.85Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQT+SEHNYVSPVMMMPTFGTTYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSD QQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.9e-9396.77Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQT+SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRG+HNEYLYYEVPAAVPEQSDELQQQENAAVPGQSD QQQQEN EEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGG
GGAAGAAGTGCCTCCAATGACACAGACAAAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAAT
CGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCAT
GGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCTACAGCAACAAGAGAATGCAGCAGTACC
CGGGCAATCGGATGGGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAGTCGACGACGACAACCAGCTAGAAATCGTCGACGTCCAGGTTGTG
GAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGG
GGAAGAAGTGCCTCCAATGACACAGACAAAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAAT
CGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCAT
GGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCTACAGCAACAAGAGAATGCAGCAGTACC
CGGGCAATCGGATGGGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAGTCGACGACGACAACCAGCTAGAAATCGTCGACGTCCAGGTTGTG
GAACACATTGA
Protein sequenceShow/hide protein sequence
MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMH
GHGRGRGEHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH