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IVF0000017 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000017
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr10:13923907..13924281
RNA-Seq ExpressionIVF0000017
SyntenyIVF0000017
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049609.1 transposase [Cucumis melo var. makuwa]2.67e-3052.89Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA
        +V+ EKV F+ E IN+++ LPND + AY G +LI    +G A+ ++K IVW +A+    P  RLQL+PHQLT E+NVWLFFIKKKI PT HDS +  +YA
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA

Query:  MLLYSILMKQAFNLGYLMQGA
        ++LY I  K+ FNLGY+M  A
Subjt:  MLLYSILMKQAFNLGYLMQGA

KAA0067453.1 hypothetical protein E6C27_scaffold40G001190 [Cucumis melo var. makuwa]5.53e-2753.54Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP-----MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA
        MV+REKV+F  E IN+++GLP+ E +AY  HQLIN PT+G  R ML  I W   +W+ +        +LQLYPHQLT E+++WLFFIK KILP  HD A
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP-----MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA

TYK09554.1 hypothetical protein E5676_scaffold757G00370 [Cucumis melo var. makuwa]2.75e-2754.55Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP-----MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA
        MV+REKV+F  E IN+++GLP+ E +AY  HQLIN PT+G  R ML  I W   +W+ +        +LQLYPHQLT E++VWLFFIK KILP  HD A
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP-----MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]3.34e-3152.89Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA
        +V+ EKV F+ E IN+++ LPND + AY G +LI    +G A+ ++K IVW +A+    P  RLQL+PHQLT E+NVWLFFIKKKI PT HDS +  +YA
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA

Query:  MLLYSILMKQAFNLGYLMQGA
        ++LY I  K+ FNLGY+M  A
Subjt:  MLLYSILMKQAFNLGYLMQGA

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]1.67e-3652.07Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA
        +V+R+KVSF++E IN+++GL ND +++Y    LI  PT+G +R++++ I WL A W +     LQLYPHQLTTE+NVWL FIKKKI+P  +DS +P +Y 
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA

Query:  MLLYSILMKQAFNLGYLMQGA
        +LLY  + KQ FNLGY+M  A
Subjt:  MLLYSILMKQAFNLGYLMQGA

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase6.7e-2651.61Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA
        +V+ EKV F+ E IN+++ LPND + AY G +LI    +G A+ ++K IVW +A+    P  RLQL+PHQLT E+NVWLFFIKKKI PT HDS +  +YA
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA

Query:  MLLYSILMKQAFNLGYLMQGALFA
        ++LY I  K+ FNLGY+M  A  +
Subjt:  MLLYSILMKQAFNLGYLMQGALFA

A0A5A7VH86 Uncharacterized protein4.2e-2053.54Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKI-----PMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA
        MV+REKV+F  E IN+++GLP D+ +AY  HQLIN PT+G  R ML  I W   +W+ +        +LQLYPHQLT E+++WLFFIK KILP  HD A
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKI-----PMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA

A0A5D3CEC6 Uncharacterized protein2.5e-2054.55Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKI-----PMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA
        MV+REKV+F  E IN+++GLP D+ +AY  HQLIN PT+G  R ML  I W   +W+ +        +LQLYPHQLT E++VWLFFIK KILP  HD A
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKI-----PMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA

A0A5D3CVL7 Uncharacterized protein6.7e-2651.61Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA
        +V+ EKV F+ E IN+++ LPND + AY G +LI    +G A+ ++K IVW +A+    P  RLQL+PHQLT E+NVWLFFIKKKI PT HDS +  +YA
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA

Query:  MLLYSILMKQAFNLGYLMQGALFA
        ++LY I  K+ FNLGY+M  A  +
Subjt:  MLLYSILMKQAFNLGYLMQGALFA

A0A5D3DES7 Uncharacterized protein4.2e-2852.07Show/hide
Query:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA
        +V+R+KVSF++E IN+++GL ND +++Y    LI  PT+G +R++++ I WL A W +     LQLYPHQLTTE+NVWL FIKKKI+P  +DS +P +Y 
Subjt:  MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYA

Query:  MLLYSILMKQAFNLGYLMQGA
        +LLY  + KQ FNLGY+M  A
Subjt:  MLLYSILMKQAFNLGYLMQGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATAGGGAAAAGGTCTCTTTTAGCGTAGAGACTATTAACAAAATACATGGACTCCCAAACGATGAGGTGGAAGCATACCTTGGCCACCAACTGATCAACGCGCC
TACTCAAGGTTTCGCAAGGATAATGTTAAAAAAGATCGTGTGGCTAGACGCTGAGTGGAAGAAGATACCTATGGGGAGGTTGCAACTCTACCCGCATCAACTTACAACTG
AATCCAACGTTTGGCTTTTCTTTATAAAGAAGAAAATTCTTCCCACAAGGCATGATAGTGCGATGCCGTTTGACTACGCGATGCTTCTCTACTCCATCCTCATGAAGCAA
GCGTTCAACTTAGGCTATTTAATGCAAGGGGCACTTTTCGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATAGGGAAAAGGTCTCTTTTAGCGTAGAGACTATTAACAAAATACATGGACTCCCAAACGATGAGGTGGAAGCATACCTTGGCCACCAACTGATCAACGCGCC
TACTCAAGGTTTCGCAAGGATAATGTTAAAAAAGATCGTGTGGCTAGACGCTGAGTGGAAGAAGATACCTATGGGGAGGTTGCAACTCTACCCGCATCAACTTACAACTG
AATCCAACGTTTGGCTTTTCTTTATAAAGAAGAAAATTCTTCCCACAAGGCATGATAGTGCGATGCCGTTTGACTACGCGATGCTTCTCTACTCCATCCTCATGAAGCAA
GCGTTCAACTTAGGCTATTTAATGCAAGGGGCACTTTTCGCTTAG
Protein sequenceShow/hide protein sequence
MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYAMLLYSILMKQ
AFNLGYLMQGALFA