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IVF0000020 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000020
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionArmadillo-like helical
Genome locationchr01:29366690..29366908
RNA-Seq ExpressionIVF0000020
SyntenyIVF0000020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060939.1 Armadillo-like helical [Cucumis melo var. makuwa]1.11e-2776.83Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI
        MDCIMFVNG MKMDEGANKRIKIPY          + TWLFA +RLKK+ASTTT QVKKAEDSSNNSSERNGNI+IRTTM+I
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI

TYK05541.1 Armadillo-like helical [Cucumis melo var. makuwa]2.14e-3279.27Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI
        MD IMFVNGRMKMDEGANKRIKI Y          + TWLFA SRLKKLASTTTTQVKKAEDSSNNSSERNGNI+IRTTM+I
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI

XP_004143023.2 uncharacterized protein LOC101221149 [Cucumis sativus]3.01e-2776.83Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI
        MDCIMFVNG MKMDEGANKRIKIPY          + TWLFA +RLKKLASTTT QVKKAEDSSNNSSERNGN +IRTTM+I
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI

XP_008444580.1 PREDICTED: uncharacterized protein LOC103487852 [Cucumis melo]1.17e-2776.83Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI
        MDCIMFVNG MKMDEGANKRIKIPY          + TWLFA +RLKK+ASTTT QVKKAEDSSNNSSERNGNI+IRTTM+I
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI

XP_038886260.1 uncharacterized protein LOC120076487 [Benincasa hispida]6.36e-2272.5Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTM
        MDCIMFVNG MKM+E ANKRIKIPY          + TWLFA +RLKKL STTT QVKKAEDSS NSSE NGNII RTTM
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTM

TrEMBL top hitse value%identityAlignment
A0A0A0LL28 Uncharacterized protein2.6e-2276.83Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI
        MDCIMFVNG MKMDEGANKRIKIPY          + TWLFA +RLKKLAS TTTQVKKAEDSSNNSSERNGN +IRTTM+I
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI

A0A1S3BA59 uncharacterized protein LOC1034878521.2e-2276.83Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI
        MDCIMFVNG MKMDEGANKRIKIPY          + TWLFA +RLKK+AS TTTQVKKAEDSSNNSSERNGNI+IRTTM+I
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI

A0A5A7V5F7 Armadillo-like helical1.2e-2276.83Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI
        MDCIMFVNG MKMDEGANKRIKIPY          + TWLFA +RLKK+AS TTTQVKKAEDSSNNSSERNGNI+IRTTM+I
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI

A0A5D3C0T4 Armadillo-like helical1.4e-2379.27Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI
        MD IMFVNGRMKMDEGANKRIKI Y          + TWLFA SRLKKLASTTTTQVKKAEDSSNNSSERNGNI+IRTTM+I
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPY----------QVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI

A0A6J1BPK8 uncharacterized protein LOC1110046663.9e-1060.26Show/hide
Query:  MDCIMFVNGRMKMDEGANKRIKIPYQV----------TWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRT
        MDCIMFVNG MKM E  +KRIKIPY            TWLFA +RLKKLAS    +V+KAEDSSNNS ER+G +++RT
Subjt:  MDCIMFVNGRMKMDEGANKRIKIPYQV----------TWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGCATAATGTTTGTGAATGGTAGAATGAAGATGGATGAGGGTGCAAATAAGAGAATCAAGATTCCATATCAGGTAACATGGCTTTTTGCAATATCTAGATTAAA
GAAATTGGCTTCAACGACAACAACTCAAGTGAAAAAAGCTGAAGATTCTTCTAACAACAGCAGTGAGAGGAATGGAAACATCATAATCAGAACAACCATGAGTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGCATAATGTTTGTGAATGGTAGAATGAAGATGGATGAGGGTGCAAATAAGAGAATCAAGATTCCATATCAGGTAACATGGCTTTTTGCAATATCTAGATTAAA
GAAATTGGCTTCAACGACAACAACTCAAGTGAAAAAAGCTGAAGATTCTTCTAACAACAGCAGTGAGAGGAATGGAAACATCATAATCAGAACAACCATGAGTATATAA
Protein sequenceShow/hide protein sequence
MDCIMFVNGRMKMDEGANKRIKIPYQVTWLFAISRLKKLASTTTTQVKKAEDSSNNSSERNGNIIIRTTMSI