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IVF0000052 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000052
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr11:23613347..23613700
RNA-Seq ExpressionIVF0000052
SyntenyIVF0000052
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039625.1 pol protein [Cucumis melo var. makuwa]1.19e-0547.31Show/hide
Query:  ARVGSGLQRETGQPRATVLRRSTTVKNDSLEAFDDRLRFNATESDWASAEG---GEHAGGRRREPKRNRVEGGRG--GRKLKLESFDDVDGDG
        A +GSG Q ETG   +  LRRSTT     LE  DDRLRFN  ESDWASA+      H   R RE +R    GG     +    E+ DD DGDG
Subjt:  ARVGSGLQRETGQPRATVLRRSTTVKNDSLEAFDDRLRFNATESDWASAEG---GEHAGGRRREPKRNRVEGGRG--GRKLKLESFDDVDGDG
KAA0047842.1 gag/pol protein [Cucumis melo var. makuwa]2.41e-0460.47Show/hide
Query:  QRETGQPRATVLRRSTTVKNDSLEAFDDRLRFNATESDWASAE
        Q ETG   +  LRRST      LE FDDRLRFNA +SDWASA+
Subjt:  QRETGQPRATVLRRSTTVKNDSLEAFDDRLRFNATESDWASAE
TrEMBL top hitse value%identityAlignment
A0A5A7TDW4 Pol protein4.0e-0447Show/hide
Query:  ARVGSGLQRETGQPRATVLRRSTTVKNDSLEAFDDRLRFNATESDWASAE---GGEHAGGRRREPKRNRVEGGRG--GRKLKLESFDDVDGDG----DGD
        A +GSG Q ETG   +  LRRSTT     LE  DDRLRFN  ESDWASA+      H   R RE +R    GG     +    E+ DD DGDG    DGD
Subjt:  ARVGSGLQRETGQPRATVLRRSTTVKNDSLEAFDDRLRFNATESDWASAE---GGEHAGGRRREPKRNRVEGGRG--GRKLKLESFDDVDGDG----DGD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTCGGCTAGCTCGGGTCGGGTCGGGTTTGCAGCGCGAAACGGGGCAACCACGAGCAACGGTTCTACGACGTTCGACGACCGTGAAGAATGACAGCTTGGAGGC
GTTCGACGACCGGCTCCGCTTCAACGCGACGGAGAGCGACTGGGCGTCGGCGGAAGGTGGGGAGCACGCTGGTGGCCGGCGTCGTGAGCCCAAGAGGAACAGAGTAGAGG
GGGGCCGCGGCGGTCGAAAGTTGAAGCTGGAAAGCTTCGACGACGTGGACGGAGACGGAGATGGAGATGTGCGCGACGGAAGGAAGAAGAAGAAGGAGGAGGAGGAGCGG
CGGCGCGAAAGGGAGAGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTCGGCTAGCTCGGGTCGGGTCGGGTTTGCAGCGCGAAACGGGGCAACCACGAGCAACGGTTCTACGACGTTCGACGACCGTGAAGAATGACAGCTTGGAGGC
GTTCGACGACCGGCTCCGCTTCAACGCGACGGAGAGCGACTGGGCGTCGGCGGAAGGTGGGGAGCACGCTGGTGGCCGGCGTCGTGAGCCCAAGAGGAACAGAGTAGAGG
GGGGCCGCGGCGGTCGAAAGTTGAAGCTGGAAAGCTTCGACGACGTGGACGGAGACGGAGATGGAGATGTGCGCGACGGAAGGAAGAAGAAGAAGGAGGAGGAGGAGCGG
CGGCGCGAAAGGGAGAGAAAATGA
Protein sequenceShow/hide protein sequence
MVARLARVGSGLQRETGQPRATVLRRSTTVKNDSLEAFDDRLRFNATESDWASAEGGEHAGGRRREPKRNRVEGGRGGRKLKLESFDDVDGDGDGDVRDGRKKKKEEEER
RRERERK