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IVF0000066 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000066
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDynein beta chain, ciliary protein
Genome locationchr11:26884147..26887289
RNA-Seq ExpressionIVF0000066
SyntenyIVF0000066
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]6.03e-10985.26Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS+ ASSLKMES+VDRKPPPR AEKARESG+LDSGDV  S+S N LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
        Y RPMP+LR+T++KSSKYEDRPAPPGTLNVAQMR IILLHEGKA+DHDGPMG +QIAERYNV VAQI+TILQFLSLPPEDSL+DK   SK
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK

XP_008458465.1 PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo]2.43e-131100Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
        YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK

XP_011657169.1 uncharacterized protein LOC101223121 [Cucumis sativus]5.96e-12596.3Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDSGN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDS
        YGRPMPKLRDTNI SSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPEDSLRDKI DS
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDS

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]8.57e-10985.26Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS+ ASSLKMES+VDRKPPPR AEKARESG+LDSGDV  S+S N LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
        Y RPMP+LR+T++KSSKYEDRPAPPGTLNVAQMR I+LLHEGKA+DHDGPMG +QIAERYNV VAQI+TILQFLSLPPEDSLRDK   SK
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]5.40e-11287.37Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS+ ASSLKMES+VDRKPPPR AEKARESGSLDSGDV  S+SGN LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
        Y RPMPKLR+T++KSSKYEDRPAPPGTLNVAQMR IILLHEGKADDHDGPMG +QIAERYNV V+QI+TILQFLSLPPEDSLRDK   SK
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK

TrEMBL top hitse value%identityAlignment
A0A0A0KCC5 Uncharacterized protein1.4e-9496.3Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDSGN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDS
        YGRPMPKLRDTNI SSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPEDSLRDKI DS
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDS

A0A1S3C957 uncharacterized protein LOC103497865 isoform X11.8e-99100Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
        YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK

A0A6J1C9H1 uncharacterized protein LOC1110095502.2e-7377.2Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKA-----RESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEA
        MGQAFRRAAGRIKPASS+DS TASSLKMES+VDR+PPPR  +KA     RESG+LDSG +  S+S N  EERDPQFDAML QMVGRIKSKPGGKLEMGEA
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKA-----RESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEA

Query:  SVVERYGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITD
        +VVERY RPMPKLR+T++KSS+YEDRPAPPGTLNVAQMR +I LHEGKA+DH+G M   QIA+RYNVSV QI TILQFLSLPPED+LR K  D
Subjt:  SVVERYGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITD

A0A6J1H4J6 uncharacterized protein LOC1114599752.0e-8285.26Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS +ASSLKMES+VDRKPPPR AEKARESG+LDSGDV  S+S N LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
        Y RPMP+LR+T++KSSKYEDRPAPPGTLNVAQMR I+LLHEGKA+DHDGPMG +QIAERYNV VAQI+TILQFLSLPPEDSLRDK   SK
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK

A0A6J1L288 uncharacterized protein LOC1114991807.4e-8587.37Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS +ASSLKMES+VDRKPPPR AEKARESGSLDSGDV  S+SGN LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK
        Y RPMPKLR+T++KSSKYEDRPAPPGTLNVAQMR IILLHEGKADDHDGPMG +QIAERYNV V+QI+TILQFLSLPPEDSLRDK   SK
Subjt:  YGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21400.1 unknown protein3.7e-4452.38Show/hide
Query:  MGQAFRRAAGRIKPASSVDSTTAS----SLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEAS
        MGQ  RRA G+IK       +  S    SL  E +   K  P     A   G  D G  T+ D  N LEERDP++D ML+QMVGRIK+KPGGK EMGEAS
Subjt:  MGQAFRRAAGRIKPASSVDSTTAS----SLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEAS

Query:  VVERYGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDK
        VVE   RP+PKLR+T  +S++YE+ P P GTLNVAQ+R I+LL +GK+ DH GPMG ++IAE+Y + V+Q+Q I QFLSLP E + + K
Subjt:  VVERYGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTGTCGATTCCACTACTGCCTCTTCGTTGAAAATGGAAAGCATCGTTGATCGGAAGCCTCC
TCCGCGTGTTGCCGAGAAGGCACGGGAGAGTGGCTCTCTTGATTCCGGTGATGTCACTGCAAGTGATTCGGGAAACAGGCTTGAAGAACGAGATCCCCAATTTGATGCCA
TGCTTAGCCAAATGGTGGGTCGAATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGATACGGTAGACCAATGCCAAAGCTAAGAGAT
ACAAATATAAAATCGAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAAATGCGACAAATAATTCTCTTACACGAAGGTAAGGCTGATGATCA
TGATGGGCCAATGGGACCTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAG
ACAAAATCACGGATTCTAAATGA
mRNA sequenceShow/hide mRNA sequence
GGATTGGCCACGTTCGCCCTTCCAACACTTTTATTTTCTTCTTGGCGCCTCGAGTTTCGAACTCAGTAAAATCCGAGTCACGACTCACCCGATTCCTCATTTCGTCTCCA
TTTCTCCCTCCTGAAAATTTCTCGTAAAACCCTCCGTATCGTAGGGCTCTGATCAATTTTCGTACGAATCTGAACCTCTGATTCCAGTTAGTTCTGTGAGATCGTTGCTC
GTTTTGAAGAAGGAAAGGATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTGTCGATTCCACTACTGCCTCTTCGTTGAAAATGGAAAGCAT
CGTTGATCGGAAGCCTCCTCCGCGTGTTGCCGAGAAGGCACGGGAGAGTGGCTCTCTTGATTCCGGTGATGTCACTGCAAGTGATTCGGGAAACAGGCTTGAAGAACGAG
ATCCCCAATTTGATGCCATGCTTAGCCAAATGGTGGGTCGAATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGATACGGTAGACCA
ATGCCAAAGCTAAGAGATACAAATATAAAATCGAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAAATGCGACAAATAATTCTCTTACACGA
AGGTAAGGCTGATGATCATGATGGGCCAATGGGACCTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTC
CAGAGGACAGTCTTAGAGACAAAATCACGGATTCTAAATGACAGGAATGGAGCCATGAAAACAACGGTAGGGGGGCGACTTTTGCTCCTAAGAAGAAATAATAAAGGTTC
CAAAAATTTTCTAAATGGTTTTATACGAGTTTTTAAACTGTCGATTTTGTATACAATAAGTTCTTGAAATTTTAACTTTATGTCCA
Protein sequenceShow/hide protein sequence
MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRD
TNIKSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKITDSK