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IVF0000080 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000080
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:12169020..12169172
RNA-Seq ExpressionIVF0000080
SyntenyIVF0000080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031989.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.20e-0560Show/hide
Query:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKRS
        +VLA+GS+N     DE+SSNPH+S+ RRAEEG+    PQK+DKRS
Subjt:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKRS
KAA0041782.1 uncharacterized protein E6C27_scaffold67G001450 [Cucumis melo var. makuwa]5.28e-0761.36Show/hide
Query:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
        DV    S N  Q SDE+SSNPH SVG+R +EGM DR  QK+DKR
Subjt:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
KAA0054935.1 TMV resistance protein N-like [Cucumis melo var. makuwa]7.59e-1066.67Show/hide
Query:  MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
        MDV A+GS+++  T DE+SSNPH+SV  RA+EG+FDR PQKLDKR
Subjt:  MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
KAA0067233.1 uncharacterized protein E6C27_scaffold418G00440 [Cucumis melo var. makuwa]2.47e-0761.36Show/hide
Query:  MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDK
        +DVLA GS NR Q SDE+SSNPH  VGRR EE M D  P+ +D+
Subjt:  MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDK
TYK29193.1 uncharacterized protein E5676_scaffold880G00030 [Cucumis melo var. makuwa]5.62e-0970.45Show/hide
Query:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
        DV A  S NR Q   E+SSNPH  VGR AEEGMFD FPQKLDKR
Subjt:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
TrEMBL top hitse value%identityAlignment
A0A5A7VGL4 Retrotrans_gag domain-containing protein7.6e-0557.14Show/hide
Query:  MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKRSTSR
        +DVLA GS NR Q SDE+SSNPH  VGRR EE M D  P+ +D+    R
Subjt:  MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKRSTSR
A0A5D3D2P1 Putative Retrotransposon protein8.4e-0460Show/hide
Query:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKRS
        +VLA+GS+N     DE+SSNPH+S+ RRAEEG+    PQK+DKRS
Subjt:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKRS
A0A5D3DGJ4 TMV resistance protein N-like3.7e-0766.67Show/hide
Query:  MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
        MDV A+GS+++  T DE+SSNPH+SV  RA+EG+FDR PQKLDKR
Subjt:  MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
A0A5D3DTR2 Retrotrans_gag domain-containing protein1.7e-0461.36Show/hide
Query:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
        DV    S N  Q SDE+SSNPH SVG+R +EGM DR  QK+DKR
Subjt:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
A0A5D3DZK7 Uncharacterized protein9.0e-0670.45Show/hide
Query:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
        DV A  S NR Q   E+SSNPH  VGR AEEGMFD FPQKLDKR
Subjt:  DVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTCTAGCTGTCGGGAGCTCCAATAGAGGACAAACATCTGATGAGATATCTAGTAACCCACATAATTCAGTGGGGAGAAGAGCTGAGGAAGGCATGTTTGATCG
CTTTCCTCAGAAGTTAGATAAAAGATCAACATCGAGAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTCTAGCTGTCGGGAGCTCCAATAGAGGACAAACATCTGATGAGATATCTAGTAACCCACATAATTCAGTGGGGAGAAGAGCTGAGGAAGGCATGTTTGATCG
CTTTCCTCAGAAGTTAGATAAAAGATCAACATCGAGAGACTAA
Protein sequenceShow/hide protein sequence
MDVLAVGSSNRGQTSDEISSNPHNSVGRRAEEGMFDRFPQKLDKRSTSRD