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IVF0000084 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000084
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSecoisolariciresinol dehydrogenase-like
Genome locationchr04:29611682..29612171
RNA-Seq ExpressionIVF0000084
SyntenyIVF0000084
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043845.1 secoisolariciresinol dehydrogenase-like [Cucumis melo var. makuwa]1.37e-69100Show/hide
Query:  MHCVPPRLARPTPSMSTAMSQTNPKSKLRLKPQSKPSASSRHHDEQRRHSYPRQASNHRQRQTTRQLEFGQFGIRVNCLSPYGLARGMVTKLDGMQFEMV
        MHCVPPRLARPTPSMSTAMSQTNPKSKLRLKPQSKPSASSRHHDEQRRHSYPRQASNHRQRQTTRQLEFGQFGIRVNCLSPYGLARGMVTKLDGMQFEMV
Subjt:  MHCVPPRLARPTPSMSTAMSQTNPKSKLRLKPQSKPSASSRHHDEQRRHSYPRQASNHRQRQTTRQLEFGQFGIRVNCLSPYGLARGMVTKLDGMQFEMV

Query:  MSSMANLKGV
        MSSMANLKGV
Subjt:  MSSMANLKGV

KAG6580723.1 hypothetical protein SDJN03_20725, partial [Cucurbita argyrosperma subsp. sororia]1.24e-0759.57Show/hide
Query:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV
        +E GQFGIRVNCLSP+ +   + T+   L+G +FEM M+SMANLKGV
Subjt:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV

XP_023527970.1 secoisolariciresinol dehydrogenase-like [Cucurbita pepo subsp. pepo]1.24e-0759.57Show/hide
Query:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV
        +E GQFGIRVNCLSP+ +   + T+   L+G +FEM M+SMANLKGV
Subjt:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV

XP_028104706.1 secoisolariciresinol dehydrogenase-like [Camellia sinensis]9.75e-0863.83Show/hide
Query:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV
        +E GQFGIRVNCL+PY LA  + TK   LD  Q EM MS++ANLKGV
Subjt:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV

XP_038903548.1 secoisolariciresinol dehydrogenase-like [Benincasa hispida]6.83e-0965.96Show/hide
Query:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV
        +E GQFGIRVNCLSPY L   + TK   L+G +FEM M+SMANLKGV
Subjt:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV

TrEMBL top hitse value%identityAlignment
A0A0A0LEP1 Uncharacterized protein1.2e-0561.7Show/hide
Query:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV
        +E GQFGIRVNCLSP+ L   + TK   LDG +FE +M S ANLKGV
Subjt:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV

A0A1S3B7H5 secoisolariciresinol dehydrogenase-like1.2e-0563.83Show/hide
Query:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV
        +E GQFGIRVNCLSPY L   + TK   L+G +FE VM S ANLKGV
Subjt:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV

A0A4S4ER33 Uncharacterized protein6.8e-0663.83Show/hide
Query:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV
        +E GQFGIRVNCL+PY LA  + TK   LD  Q EM MS++ANLKGV
Subjt:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV

A0A5A7TKJ5 Secoisolariciresinol dehydrogenase-like1.2e-0563.83Show/hide
Query:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV
        +E GQFGIRVNCLSPY L   + TK   L+G +FE VM S ANLKGV
Subjt:  LEFGQFGIRVNCLSPYGLARGMVTK---LDGMQFEMVMSSMANLKGV

A0A5D3DPN9 Secoisolariciresinol dehydrogenase-like2.2e-52100Show/hide
Query:  MHCVPPRLARPTPSMSTAMSQTNPKSKLRLKPQSKPSASSRHHDEQRRHSYPRQASNHRQRQTTRQLEFGQFGIRVNCLSPYGLARGMVTKLDGMQFEMV
        MHCVPPRLARPTPSMSTAMSQTNPKSKLRLKPQSKPSASSRHHDEQRRHSYPRQASNHRQRQTTRQLEFGQFGIRVNCLSPYGLARGMVTKLDGMQFEMV
Subjt:  MHCVPPRLARPTPSMSTAMSQTNPKSKLRLKPQSKPSASSRHHDEQRRHSYPRQASNHRQRQTTRQLEFGQFGIRVNCLSPYGLARGMVTKLDGMQFEMV

Query:  MSSMANLKGV
        MSSMANLKGV
Subjt:  MSSMANLKGV

SwissProt top hitse value%identityAlignment
Q94KL7 Secoisolariciresinol dehydrogenase (Fragment)5.6e-0548.33Show/hide
Query:  SNHRQRQTTRQL--EFGQFGIRVNCLSPYGLARGMVTKLDGM----QFEMVMSSMANLKG
        S H     TR L  E GQFGIRVNCLSP+GL   +  K  G+    +FE V++   NLKG
Subjt:  SNHRQRQTTRQL--EFGQFGIRVNCLSPYGLARGMVTKLDGM----QFEMVMSSMANLKG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTGTGTGCCACCACGCTTGGCTCGACCAACTCCTTCTATGTCCACTGCGATGTCACAGACGAATCCCAAGTCGAAGCTGCGGTTGAAGCCGCAGTCGAAACCTTC
CGCAAGCTCTCGACATCATGATGAACAACGCCGGCATAGTTACCCACGTCAAGCCTCGAATCATCGACAACGACAAACAACGCGGCAACTGGAGTTTGGGCAGTTTGGGA
TTAGGGTGAATTGCTTATCGCCGTATGGGTTGGCGAGGGGGATGGTGACGAAGTTGGATGGGATGCAGTTTGAGATGGTTATGAGTTCTATGGCAAATTTGAAAGGAGTG
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTGTGTGCCACCACGCTTGGCTCGACCAACTCCTTCTATGTCCACTGCGATGTCACAGACGAATCCCAAGTCGAAGCTGCGGTTGAAGCCGCAGTCGAAACCTTC
CGCAAGCTCTCGACATCATGATGAACAACGCCGGCATAGTTACCCACGTCAAGCCTCGAATCATCGACAACGACAAACAACGCGGCAACTGGAGTTTGGGCAGTTTGGGA
TTAGGGTGAATTGCTTATCGCCGTATGGGTTGGCGAGGGGGATGGTGACGAAGTTGGATGGGATGCAGTTTGAGATGGTTATGAGTTCTATGGCAAATTTGAAAGGAGTG
TGA
Protein sequenceShow/hide protein sequence
MHCVPPRLARPTPSMSTAMSQTNPKSKLRLKPQSKPSASSRHHDEQRRHSYPRQASNHRQRQTTRQLEFGQFGIRVNCLSPYGLARGMVTKLDGMQFEMVMSSMANLKGV