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IVF0000098 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000098
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionVQ domain-containing protein
Genome locationchr05:24834303..24834738
RNA-Seq ExpressionIVF0000098
SyntenyIVF0000098
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063578.1 hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]6.16e-44100Show/hide
Query:  MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDDQGC
        MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDDQGC
Subjt:  MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDDQGC

KAG6599333.1 hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]6.18e-4565.22Show/hide
Query:  MGKCGENQYTNQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPS-SMFHADREMEVLKFSDD
        MGKCGEN++ +Q QSQ    NPTKVQRKPIKVKYISSPMMIKAS+A EFRAIVQQLTGF S+S PTRR N K     A+TPS S  HA+ +ME LK SD 
Subjt:  MGKCGENQYTNQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPS-SMFHADREMEVLKFSDD

Query:  HMASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFFQ
        +M+SLL+FDD+ CF T +N   +L NN M FQ+SC FQ
Subjt:  HMASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFFQ

KGN60779.1 hypothetical protein Csa_019238 [Cucumis sativus]1.03e-7590.07Show/hide
Query:  MGKCGENQYTNQ--SQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADR-EMEVLKFS
        MGKCGENQYTN   SQSQSQNQNPTKVQRKPIKVKYISSPMMIKAS+ALEFRAIVQQLTGFDSN TPTRRRNQK +SDCARTPS+MFHADR EMEVLKFS
Subjt:  MGKCGENQYTNQ--SQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADR-EMEVLKFS

Query:  DDH-MASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFFQ
        DDH M SLLQFD QGCF+TQNNNN ILPNNIMEFQSSCFFQ
Subjt:  DDH-MASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFFQ

PRQ41767.1 hypothetical protein RchiOBHm_Chr3g0450331 [Rosa chinensis]1.54e-1148.19Show/hide
Query:  PIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNST-PTRRRNQKS-VSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDD
        PI +KYISSPMM++A++A EFRAIVQ+LTG +S++T P    NQ S VS+   + S+        E++KFSDD +    QFD+
Subjt:  PIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNST-PTRRRNQKS-VSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDD

XP_010102262.1 sigma factor binding protein 1, chloroplastic [Morus notabilis]3.43e-1136.25Show/hide
Query:  GENQYTNQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTP-----------TRRRNQKSVSDCARTPSSMFHADREMEV
        G +QY N    +SQ Q P+K ++KPIK+KYISSPMM++A++A EFRAIVQ+LTG +SN T             R     S SD  +   S F AD   + 
Subjt:  GENQYTNQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTP-----------TRRRNQKSVSDCARTPSSMFHADREMEV

Query:  L-----------------KFSDDHMASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFF
                          KFS+ +++ L Q D+ G F         +  +   FQSSC F
Subjt:  L-----------------KFSDDHMASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFF

TrEMBL top hitse value%identityAlignment
A0A0A0LIA7 VQ domain-containing protein3.6e-5790.07Show/hide
Query:  MGKCGENQYT--NQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADR-EMEVLKFS
        MGKCGENQYT  N SQSQSQNQNPTKVQRKPIKVKYISSPMMIKAS+ALEFRAIVQQLTGFDSN TPTRRRNQK +SDCARTPS+MFHADR EMEVLKFS
Subjt:  MGKCGENQYT--NQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADR-EMEVLKFS

Query:  DD-HMASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFFQ
        DD HM SLLQFD QGCF+TQ NNNNILPNNIMEFQSSCFFQ
Subjt:  DD-HMASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFFQ

A0A2P6R5P1 VQ domain-containing protein1.2e-0743.88Show/hide
Query:  QSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNST-PTRRRNQKS-VSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDD
        Q +++ Q  +K +  PI +KYISSPMM++A++A EFRAIVQ+LTG +S++T P    NQ S VS+   + S+        E++KFSDD +    QFD+
Subjt:  QSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNST-PTRRRNQKS-VSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDD

A0A5A7V7M1 VQ domain-containing protein4.0e-32100Show/hide
Query:  MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDDQGC
        MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDDQGC
Subjt:  MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDDQGC

A0A6J1A533 uncharacterized protein LOC1104149906.9e-0838.46Show/hide
Query:  QNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDS-----NSTPTRRRNQKSVSDCARTPSSMFHADR------EMEVLKFSDDHMASLLQ
        +++NPTK ++ PIK+KYISSPMM+KAS+A EFRAIVQ+LTG +S     ++ PT      ++ + A    S FH D       +  +L    D M+S L+
Subjt:  QNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDS-----NSTPTRRRNQKSVSDCARTPSSMFHADR------EMEVLKFSDDHMASLLQ

Query:  FDDQGCFDTQNNNNNILPNNIMEFQSSCFF
        FD+   +         +P N+  FQS   F
Subjt:  FDDQGCFDTQNNNNNILPNNIMEFQSSCFF

W9RT96 VQ domain-containing protein6.9e-0836.25Show/hide
Query:  GENQYTNQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTP-----------TRRRNQKSVSDCARTPSSMFHADREMEV
        G +QY N    +SQ Q P+K ++KPIK+KYISSPMM++A++A EFRAIVQ+LTG +SN T             R     S SD  +   S F AD   + 
Subjt:  GENQYTNQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTP-----------TRRRNQKSVSDCARTPSSMFHADREMEV

Query:  L-----------------KFSDDHMASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFF
                          KFS+ +++ L Q D+ G F         +  +   FQSSC F
Subjt:  L-----------------KFSDDHMASLLQFDDQGCFDTQNNNNNILPNNIMEFQSSCFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGTGTGGAGAGAATCAATACACCAACCAAAGCCAAAGCCAAAGCCAAAACCAAAACCCTACAAAAGTTCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAG
TCCAATGATGATCAAAGCAAGCAGTGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCTTCGATTCCAACAGTACTCCTACTCGCCGGAGGAACCAGAAATCGG
TTTCCGACTGCGCCCGAACTCCATCTTCAATGTTTCATGCAGATCGTGAAATGGAAGTTTTGAAGTTCTCAGATGATCACATGGCGTCGCTCCTCCAATTTGATGATCAA
GGTTGTTTTGACACACAAAATAATAATAATAATATTCTTCCCAACAACATTATGGAATTTCAATCTTCTTGTTTTTTCCAATAG
mRNA sequenceShow/hide mRNA sequence
AATCTCTCTCTAACTCTCTCTAATGGGGAAGTGTGGAGAGAATCAATACACCAACCAAAGCCAAAGCCAAAGCCAAAACCAAAACCCTACAAAAGTTCAAAGAAAACCCA
TAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAGTGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCTTCGATTCCAACAGTACTCCTACT
CGCCGGAGGAACCAGAAATCGGTTTCCGACTGCGCCCGAACTCCATCTTCAATGTTTCATGCAGATCGTGAAATGGAAGTTTTGAAGTTCTCAGATGATCACATGGCGTC
GCTCCTCCAATTTGATGATCAAGGTTGTTTTGACACACAAAATAATAATAATAATATTCTTCCCAACAACATTATGGAATTTCAATCTTCTTGTTTTTTCCAATAG
Protein sequenceShow/hide protein sequence
MGKCGENQYTNQSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSDDHMASLLQFDDQ
GCFDTQNNNNNILPNNIMEFQSSCFFQ