CuGenDBv2

Gene ID	IVF0000105
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	COX assembly mitochondrial protein
Genome location	chr09:1213307..1216951
RNA-Seq Expression	IVF0000105
Synteny	IVF0000105
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578501.1 hypothetical protein SDJN03_22949, partial [Cucurbita argyrosperma subsp. sororia]

4.20e-55

94.38

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTND+VL+EMKREYALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

XP_008459466.1 PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]

6.75e-58

100

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

XP_022993759.1 uncharacterized protein DDB_G0275933 [Cucurbita maxima]

1.87e-55

94.38

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTND+VL+EMKREYALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

XP_023549716.1 uncharacterized protein DDB_G0275933 [Cucurbita pepo subsp. pepo]

1.08e-54

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCR+QAKELNNCLH YTND+VL+EMKREYALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

XP_038889684.1 uncharacterized protein DDB_G0275933 [Benincasa hispida]

5.36e-55

94.38

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDH+ASKYAECAYGRTLSV+FKCR QAKELNNCLHLYTN+SVL+EMKREYALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX6 COX assembly mitochondrial protein

2.0e-40

94.38

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECD YASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTNDS+LDEMKREYALQ DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

A0A1S3CA82 COX assembly mitochondrial protein

3.3e-43

100

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

A0A6J1BW91 COX assembly mitochondrial protein

2.1e-37

88.64

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGK
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYAS+YAECAYGRTLSV++KCR+QAKELN+CLH YTND+VL+EMKR+YALQ DGK
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGK

A0A6J1FIP8 COX assembly mitochondrial protein

1.5e-40

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTND+VL+EMKREYA QHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

A0A6J1K100 COX assembly mitochondrial protein

2.4e-41

94.38

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTND+VL+EMKREYALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

SwissProt top hits

e value

%identity

Alignment

Q552P9 Uncharacterized protein DDB_G0275933

4.8e-07

37.88

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Query:  VEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREY
        V+  LR K+K ++LKEC  + + +A+C+  + +SV+++CR   + + NCL  YT    L  MKRE+
Subjt:  VEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREY

Arabidopsis top hits

e value

%identity

Alignment

AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like

3.7e-31

70.93

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Query:  YIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGK
        Y+++ARENHVKKKVEEALRSKMK KAL ECD Y SKYA+CA GRT SV++ CR QA+ELN CLH +TND+VL+EMKR Y +Q +GK
Subjt:  YIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGK

Sequences

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CDS sequence

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ATGGGTTACATTCAGGAAGCTCGAGAAAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTACGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCATTACGCTTC
GAAATATGCTGAATGCGCTTATGGCAGAACGTTATCTGTCATTTTCAAGTGTCGTAATCAAGCTAAAGAATTGAACAATTGTCTTCACTTATACACTAACGACTCCGTGT
TGGACGAGATGAAGCGGGAATATGCACTTCAACATGATGGGAAGCCTTGA

mRNA sequence

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AAATAAATAAAATAATAGTGAACTGGGGAATCGGAATCGAGACTCCGGAGTTGGCTTCGAACGTCCTACTTCCGACGAAATCAAGGGGATTTGACTGCTAATTCATGGGT
TACATTCAGGAAGCTCGAGAAAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTACGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCATTACGCTTCGAAATA
TGCTGAATGCGCTTATGGCAGAACGTTATCTGTCATTTTCAAGTGTCGTAATCAAGCTAAAGAATTGAACAATTGTCTTCACTTATACACTAACGACTCCGTGTTGGACG
AGATGAAGCGGGAATATGCACTTCAACATGATGGGAAGCCTTGAGAAAGAGTATAACATTACCCAATGAGAACTGAAGATTAATGTTATGTATCAGTCTCAGGCGCACTA
TCAGATGATTGTCACTGAAGTATTGATATTAGTAAGACTTGGACGAAAGTTGAGGCTTTTTTCATTTTGTGATCTGAACAAGCAAAGAAATTCTGGTTTTTTGGCATAAG
AATGATCTTTGATCTCTTCATGTATAAAATTCAATGCTATTCTTCTACGTTAAATCATAATCTTTACCATTTTTGCAGGCATATCTTTACAAGGAACGAGTTGTCTTCAA
TATAATTTTTGCCGAATGCTAAAGTTTCCTTCCATTTGCCATTTAGGATCCTAGTTGTTAGACTAGAGAAAGCCATAATCTGATTTACGGACTTCGGCGTCCTTGACTTG
CTTGGAGTGTAAAAGAAGAATG

Protein sequence

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MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKELNNCLHLYTNDSVLDEMKREYALQHDGKP

IVF0000105 (gene) of Melon (IVF77) v1 genome