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IVF0000113 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000113
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Genome locationchr04:24582255..24588155
RNA-Seq ExpressionIVF0000113
SyntenyIVF0000113
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR016464 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141152.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]1.87e-6098.95Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_008465169.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo]4.58e-61100Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022152373.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia]6.27e-5994.74Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022935669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata]7.62e-6096.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_038906356.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]3.77e-6096.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPAR FVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0LDA2 L51_S25_CI-B8 domain-containing protein4.9e-4598.95Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A1S3CN67 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.7e-45100Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A5A7T2I6 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 21.7e-45100Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1F628 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like1.4e-4496.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1J6D3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like7.1e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQI KALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

SwissProt top hitse value%identityAlignment
P0CB79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.2e-1851.76Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

P0CB80 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.2e-1851.76Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Q02370 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 26.5e-1850.57Show/hide
Query:  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLV
        RG+L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLV

Q4R5E2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.9e-1751.25Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLV
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLV

Q9FIJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 25.6e-3875.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSG++PQ+WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Arabidopsis top hitse value%identityAlignment
AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative4.0e-3975.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSG++PQ+WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCCGCTAGGGCTTTTGTTGAAAAAAATTACAA
GGACCTCAAGACTTTGAATCCCAAATTTCCAATTTTGATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTC
TGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTGGTTAAAGTTGGGGCATCATGA
mRNA sequenceShow/hide mRNA sequence
CTACTTTTATAAAATTTAGTCTCATTTATAACTGAATTTAATCCTTGTCTATATGTGAATTTTTATTGTAAAGTAAATCAAAGGAGCTCATAGGTAAGATTCATAAACAA
AATTCCCTTGCTTGTTTAACTTAGCATTGGCGAAAAAGCCGATTGGCATTTGGGAAGGTCCGGGTTCGTTCATCAGAAGAAGTTCAGTGACGAAATCACAGCGAGAGAGG
TTGGAAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCCGCTAGGGCTTTTGTTGAAAAAA
ATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCAATTTTGATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTT
GCTCGTCTGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTGGTTAAAGTTGGGGCATCATGAAGGAATAATCTGCTGTGCTATTGTTACTGGCAACT
GACGTTAATAAATGCACGAGTGGAACTTTTGTTGAGATGCTTTTCCGTTTACATTCTTTTCAGTCCGCTTTTATGAGATTATCTCTCAAATATTCATCTTGAGTAATTGT
GTTTCTGCTACGCAAGCCTATTTGGTTTGTATGAATAGTTTCTCCGAGAGTGTTGTCATAATGGATACTCTTTGCGATGCAATGAGAGATTAGATTGAAAGATGTTAAAA
TATGAGAGAATATTTGGACACTTTTTAAATGATGAGGATAAATTGAAAAGCATTACAACGTTAAGTACTAAAACA
Protein sequenceShow/hide protein sequence
MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS