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IVF0000125 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000125
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTub domain-containing protein
Genome locationchr05:7332642..7332845
RNA-Seq ExpressionIVF0000125
SyntenyIVF0000125
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037880.1 uncharacterized protein E6C27_scaffold36G00470 [Cucumis melo var. makuwa]2.66e-1883.64Show/hide
Query:  RNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL
        RN EN TAQPPPC SACRT KARQAA KVEPQSSIGSLYHRLL TIAI+ VIR L
Subjt:  RNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL
KAA0053092.1 uncharacterized protein E6C27_scaffold778G00180 [Cucumis melo var. makuwa]3.17e-1777.05Show/hide
Query:  CAPAPTRNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL
        C   P RNPENATAQPPP  SACRT KA  AA KVEPQSSIGSLYHRLL TIAI+ VIR L
Subjt:  CAPAPTRNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL
TrEMBL top hitse value%identityAlignment
A0A5A7T3H0 Tub domain-containing protein1.6e-1383.64Show/hide
Query:  RNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL
        RN EN TAQPPPC SACRT KARQAA KVEPQSSIGSLYHRLL TIAI+ VIR L
Subjt:  RNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL
A0A5A7UBI0 Uncharacterized protein4.6e-1377.05Show/hide
Query:  CAPAPTRNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL
        C   P RNPENATAQPPP  SACRT KA  AA KVEPQSSIGSLYHRLL TIAI+ VIR L
Subjt:  CAPAPTRNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGGGCAATAGGTTGTGCACCCGCACCGACGAGGAACCCCGAGAACGCTACTGCTCAGCCACCCCCTTGTTGCTCAGCTTGTCGGACGATGAAAGCACGCCAAGC
CGCACGGAAAGTTGAACCTCAAAGCTCCATCGGAAGTCTCTACCATAGGTTGCTCCCGACGATTGCCATAATGATTGTGATTCGTTTCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACGGGCAATAGGTTGTGCACCCGCACCGACGAGGAACCCCGAGAACGCTACTGCTCAGCCACCCCCTTGTTGCTCAGCTTGTCGGACGATGAAAGCACGCCAAGC
CGCACGGAAAGTTGAACCTCAAAGCTCCATCGGAAGTCTCTACCATAGGTTGCTCCCGACGATTGCCATAATGATTGTGATTCGTTTCCTTTGA
Protein sequenceShow/hide protein sequence
MPRAIGCAPAPTRNPENATAQPPPCCSACRTMKARQAARKVEPQSSIGSLYHRLLPTIAIMIVIRFL