CuGenDBv2

Gene ID	IVF0000148
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Rab-GAP TBC domain-containing protein
Genome location	chr09:14606363..14606857
RNA-Seq Expression	IVF0000148
Synteny	IVF0000148
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0090630 - activation of GTPase activity (biological process) GO:0005096 - GTPase activator activity (molecular function)
InterPro domains	IPR000195 - Rab-GTPase-TBC domain IPR035969 - Rab-GTPase-TBC domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022942457.1 GTPase-activating protein gyp7-like [Cucurbita moschata]

4.49e-24

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKDI YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

XP_022976198.1 GTPase-activating protein GYP7-like [Cucurbita maxima]

4.49e-24

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKDI YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

XP_023520417.1 TBC1 domain family member 15-like [Cucurbita pepo subsp. pepo]

5.84e-24

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKD+ YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

XP_023521942.1 GTPase-activating protein gyp7-like [Cucurbita pepo subsp. pepo]

4.49e-24

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKDI YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

XP_038689999.1 TBC1 domain family member 15-like isoform X3 [Tripterygium wilfordii]

3.84e-24

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKD+ YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BM65 TBC1 domain family member 17

3.6e-19

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKD+ YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

A0A6J1FQA4 GTPase-activating protein gyp7-like

2.7e-19

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKDI YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

A0A6J1ILF0 GTPase-activating protein GYP7-like

2.7e-19

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKDI YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

A0A6J1JCV6 small G protein signaling modulator 1-like

3.6e-19

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKD+ YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

A0A7J7C225 Ypt/Rab-GAP domain of gyp1p superfamily protein

3.6e-19

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WMLTLHQIGLDVVRTD+TLV YEKQENLSKLWDILAVYAWIDKD+ YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20440.1 Ypt/Rab-GAP domain of gyp1p superfamily protein

9.0e-15

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WML+LHQIGLDV RTD+ L  YE   N SKLWD+LA+Y W++ DI Y QG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

AT2G20440.2 Ypt/Rab-GAP domain of gyp1p superfamily protein

9.0e-15

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        WML+LHQIGLDV RTD+ L  YE   N SKLWD+LA+Y W++ DI Y QG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

AT4G27100.1 Ypt/Rab-GAP domain of gyp1p superfamily protein

9.3e-20

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        W+LTLHQIGLDV RTD+ LV YEK+ENLSKLWDIL+VYAWID D+ YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

AT4G27100.2 Ypt/Rab-GAP domain of gyp1p superfamily protein

9.3e-20

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        W+LTLHQIGLDV RTD+ LV YEK+ENLSKLWDIL+VYAWID D+ YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

AT5G54780.1 Ypt/Rab-GAP domain of gyp1p superfamily protein

2.4e-20

Show/hide

Query:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG
        W+LTLHQIGLDV RTD+TLV YEK+ENLSKLWDILA+YAWID D+ YCQG
Subjt:  WMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACCATACAATTTTTCTACAAATTCTAAACTCATTTAAGTTCCATTTTCTCCTCAATTGTTGGTGGATGCTTACTTTACATCAGATAGGTCTTGATGTGGTTCGGAC
TGACAAAACATTGGTATTATATGAAAAGCAAGAAAACTTGTCAAAACTTTGGGATATTCTTGCTGTTTATGCCTGGATAGATAAAGACATCGATTACTGTCAAGGTGGGT
AA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDHTIFLQILNSFKFHFLLNCWWMLTLHQIGLDVVRTDKTLVLYEKQENLSKLWDILAVYAWIDKDIDYCQGG

IVF0000148 (gene) of Melon (IVF77) v1 genome