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IVF0000198 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000198
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr08:27256772..27257149
RNA-Seq ExpressionIVF0000198
SyntenyIVF0000198
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026180.1 hypothetical protein E6C27_scaffold19G001410 [Cucumis melo var. makuwa]1.28e-4072.57Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        M+S+K S RGRTNSTSSKGN P SSSNS PSPMSANQYAMDLGFTT            IGS TESSTPPRP ANL H SGGVVQMRPP +PSSNRESSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAICGKTR
        P TYSQA+    R
Subjt:  PITYSQAICGKTR

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]1.32e-4170.09Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MS EK +ARGRTNSTSSKGN P SSSNS PSPMSA+QYAMDLGFTT            IGSPTESSTPP+PS NLI  SGGVVQMR PV+PSSNR+SSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAICGKTRDQIL
        P TYSQA+    R ++L
Subjt:  PITYSQAICGKTRDQIL

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]1.07e-4074.07Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTTI------------GSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MSSEK SARGRTNSTSSKGN P SSSNSA SPM+++QYAMDL FTT+            GSPTESSTPPRP ANLI  SGGVVQMRPP +PSSNRESSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTTI------------GSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAI
        P TYSQA+
Subjt:  PITYSQAI

KAA0060855.1 hypothetical protein E6C27_scaffold137G00900 [Cucumis melo var. makuwa]3.48e-4368.7Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MSSEK S RGRTNSTSSKGN P SSSNSAPSPMSA+QYAMDLGF T            IGS TESST PRPS NLI    GVVQMRP   PSSNRESSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAI------CGKTRDQILFSKTYRCL
           YSQA+      C KTRDQILFSK Y CL
Subjt:  PITYSQAI------CGKTRDQILFSKTYRCL

KAA0067933.1 hypothetical protein E6C27_scaffold138G001030 [Cucumis melo var. makuwa]2.07e-6889.6Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT            IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAICGKTRDQILFSKTYRCL
        PITYSQA+CGKTRDQILFSKTYRCL
Subjt:  PITYSQAICGKTRDQILFSKTYRCL

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein2.8e-3175.93Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MSS+K SARGRTNSTSSKGN P SSSNSAPSP+SA+QYAMDLGFTT            IGSPTESSTPPRPS NLI  S GVVQMRPP +PSSNRESSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAI
        P TYSQA+
Subjt:  PITYSQAI

A0A5A7U8A0 Uncharacterized protein6.3e-3170.09Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MS EK +ARGRTNSTSSKGN P SSSNS PSPMSA+QYAMDLGFTT            IGSPTESSTPP+PS NLI  SGGVVQMR PV+PSSNR+SSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAICGKTRDQIL
        P TYSQA+    R ++L
Subjt:  PITYSQAICGKTRDQIL

A0A5A7V4P4 Uncharacterized protein9.7e-3268.7Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MSSEK S RGRTNSTSSKGN P SSSNSAPSPMSA+QYAMDLGF T            IGS TESST PRPS NLI    GVVQMRP   PSSNRESSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQ------AICGKTRDQILFSKTYRCL
           YSQ      A+C KTRDQILFSK Y CL
Subjt:  PITYSQ------AICGKTRDQILFSKTYRCL

A0A5A7VIK7 Uncharacterized protein7.1e-5189.6Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT            IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAICGKTRDQILFSKTYRCL
        PITYSQA+CGKTRDQILFSKTYRCL
Subjt:  PITYSQAICGKTRDQILFSKTYRCL

E5GCE6 Uncharacterized protein5.3e-3074.07Show/hide
Query:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP
        MSSEK SARGRTNSTSSKG+ P SSSNS PSPMSA QY MDLGFT             IGSPTESSTPPRPS NLI  SGGV+QMRPP +PSSNRESSTP
Subjt:  MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTT------------IGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTP

Query:  PITYSQAI
        P TYSQA+
Subjt:  PITYSQAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCGGAAAAGGTAAGTGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCAATTGCCCATATTCTTCTTCTAACTCTGCACCCTCACCCATGAGTGCAAATCA
ATATGCAATGGATTTAGGGTTTACCACGATTGGATCTCCCACAGAGTCATCAACTCCACCTAGGCCTTCGGCCAATCTCATCCATTCTTCTGGTGGAGTCGTTCAAATGA
GGCCTCCTGTCGCTCCTTCATCTAATAGGGAGTCTTCTACTCCACCTATAACTTATTCTCAAGCTATTTGTGGCAAGACTCGAGATCAAATCTTATTTTCAAAAACCTAT
CGTTGCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCGGAAAAGGTAAGTGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCAATTGCCCATATTCTTCTTCTAACTCTGCACCCTCACCCATGAGTGCAAATCA
ATATGCAATGGATTTAGGGTTTACCACGATTGGATCTCCCACAGAGTCATCAACTCCACCTAGGCCTTCGGCCAATCTCATCCATTCTTCTGGTGGAGTCGTTCAAATGA
GGCCTCCTGTCGCTCCTTCATCTAATAGGGAGTCTTCTACTCCACCTATAACTTATTCTCAAGCTATTTGTGGCAAGACTCGAGATCAAATCTTATTTTCAAAAACCTAT
CGTTGCTTATGA
Protein sequenceShow/hide protein sequence
MSSEKVSARGRTNSTSSKGNCPYSSSNSAPSPMSANQYAMDLGFTTIGSPTESSTPPRPSANLIHSSGGVVQMRPPVAPSSNRESSTPPITYSQAICGKTRDQILFSKTY
RCL